Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.4e-66 256.1 132 100.0
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 6.3e-38 161.0 85 92.9
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 2.0e-36 156.0 203 49.8
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 2.5e-34 149.1 105 73.3
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 4.2e-34 148.3 104 72.1
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 5.5e-34 147.9 83 86.7
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 5.5e-34 147.9 90 80.0
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 7.2e-34 147.5 104 73.1
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 1.6e-33 146.4 101 72.3
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 2.1e-33 146.0 104 74.0
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 2.1e-33 146.0 80 85.0
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 2.1e-33 146.0 104 70.2
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 2.7e-33 145.6 99 74.7
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 3.6e-33 145.2 83 79.5
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 3.6e-33 145.2 81 85.2
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 4.6e-33 144.8 84 78.6
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 1.3e-32 143.3 93 73.1
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 1.8e-32 142.9 101 71.3
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 1.8e-32 142.9 103 70.9
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 2.3e-32 142.5 81 80.2
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 2.3e-32 142.5 105 69.5
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 2.3e-32 142.5 100 71.0
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 2.3e-32 142.5 100 71.0
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 3.0e-32 142.1 85 81.2
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 3.0e-32 142.1 81 80.2
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 3.0e-32 142.1 95 70.5
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 3.0e-32 142.1 103 69.9
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 3.9e-32 141.7 95 69.5
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 3.9e-32 141.7 83 79.5
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 5.1e-32 141.4 98 67.3
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 5.1e-32 141.4 99 63.6
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 5.1e-32 141.4 80 82.5
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 5.1e-32 141.4 100 70.0
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 8.7e-32 140.6 85 77.6
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 1.1e-31 140.2 81 80.2
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 1.1e-31 140.2 85 76.5
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.5e-31 139.8 85 75.3
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 1.5e-31 139.8 100 71.0
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.5e-31 139.8 83 79.5
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 1.9e-31 139.4 80 81.2
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 1.9e-31 139.4 85 76.5
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 1.9e-31 139.4 80 80.0
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 1.9e-31 139.4 80 82.5
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 2.5e-31 139.0 85 75.3
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 2.5e-31 139.0 84 79.8
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 2.5e-31 139.0 80 80.0
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 2.5e-31 139.0 106 66.0
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 3.3e-31 138.7 80 81.2
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 3.3e-31 138.7 83 80.7
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 3.3e-31 138.7 103 68.0
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 3.3e-31 138.7 104 66.3
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 3.3e-31 138.7 99 69.7
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 3.3e-31 138.7 80 80.0
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 4.3e-31 138.3 98 70.4
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 4.3e-31 138.3 85 75.3
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 4.3e-31 138.3 104 69.2
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 5.7e-31 137.9 80 80.0
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 7.4e-31 137.5 80 78.8
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 7.4e-31 137.5 103 65.0
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 7.4e-31 137.5 103 68.0
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 9.7e-31 137.1 104 65.4
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 9.7e-31 137.1 80 78.8
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 9.7e-31 137.1 104 68.3
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 9.7e-31 137.1 83 78.3
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 1.3e-30 136.7 83 79.5
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.3e-30 136.7 100 69.0
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 2.2e-30 136.0 80 81.2
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 2.2e-30 136.0 81 76.5
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.2e-30 136.0 83 74.7
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 2.8e-30 135.6 83 78.3
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 3.7e-30 135.2 110 61.8
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 3.7e-30 135.2 80 80.0
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 4.8e-30 134.8 86 77.9
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 8.2e-30 134.0 99 68.7
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 4.1e-29 131.7 83 77.1
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 5.3e-29 131.3 83 75.9
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 6.9e-29 131.0 100 66.0
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 6.9e-29 131.0 119 58.0
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.9e-29 131.0 104 63.5
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 2.0e-28 129.4 83 73.5
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 2.0e-28 129.4 85 72.9
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 3.4e-28 128.6 80 72.5
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 4.5e-28 128.3 103 65.0
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 5.9e-28 127.9 83 72.3
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 5.9e-28 127.9 83 71.1
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.3e-27 126.7 84 67.9
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 1.3e-27 126.7 86 69.8
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.7e-27 126.3 104 62.5
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.7e-27 126.3 104 62.5
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 1.7e-27 126.3 100 60.0
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 2.2e-27 125.9 103 62.1
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 2.2e-27 125.9 83 68.7
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 2.2e-27 125.9 84 67.9
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 6.5e-27 124.4 83 73.5
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 8.5e-27 124.0 93 65.6
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 1.4e-26 123.2 98 62.2
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 1.9e-26 122.9 83 69.9
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 2.5e-26 122.5 98 62.2
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 4.2e-26 121.7 83 71.1
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 4.2e-26 121.7 98 61.2
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 4.2e-26 121.7 72 80.6
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 4.2e-26 121.7 72 80.6
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 5.5e-26 121.3 98 61.2
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 5.5e-26 121.3 98 61.2
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 5.5e-26 121.3 98 61.2
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 5.5e-26 121.3 98 61.2
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 5.5e-26 121.3 98 61.2
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 7.2e-26 120.9 101 60.4
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 9.4e-26 120.6 83 68.7
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 9.4e-26 120.6 83 72.3
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 9.4e-26 120.6 104 60.6
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 9.4e-26 120.6 103 61.2
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 9.4e-26 120.6 99 55.6
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 1.2e-25 120.2 83 68.7
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 1.6e-25 119.8 98 60.2
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 2.1e-25 119.4 98 60.2
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 2.1e-25 119.4 84 67.9
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 2.1e-25 119.4 83 63.9
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 2.1e-25 119.4 85 62.4
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 5.1e-24 114.8 80 66.2
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 6.7e-24 114.4 104 58.7
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 8.8e-24 114.0 71 76.1
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 2.6e-23 112.5 129 50.4
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 9.7e-23 110.5 80 63.8
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 6.3e-22 107.8 86 55.8
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 9.1e-21 104.0 105 58.1
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 4.5e-20 101.7 81 58.0
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.0e-19 100.5 62 77.4
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 1.7e-19 99.8 84 60.7
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.6e-17 93.2 73 61.6
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.4e-16 90.1 54 77.8
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.3e-16 89.4 83 48.2
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 9.7e-15 84.0 78 47.4
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.2e-14 82.8 76 47.4
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 3.1e-13 79.0 78 55.1
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 5.3e-13 78.2 53 66.0
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 5.5e-10 68.2 101 42.6


User provided reference genes

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