Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.8e-215 752.3 374 100.0
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 2.9e-189 665.2 377 89.4
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 2.0e-161 572.8 399 74.7
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 3.2e-140 502.3 396 64.9
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 7.2e-140 501.1 379 67.3
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 6.3e-136 488.0 400 61.8
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 4.1e-135 485.3 400 61.5
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 1.2e-134 483.8 400 63.8
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 3.5e-134 482.3 398 63.1
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 5.0e-133 478.4 393 60.8
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 1.9e-132 476.5 403 62.5
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 8.0e-131 471.1 392 59.9
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 2.3e-130 469.5 392 60.2
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 5.2e-130 468.4 395 62.0
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 6.8e-130 468.0 392 62.5
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 1.5e-129 466.8 405 59.8
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 7.5e-129 464.5 393 59.5
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 9.8e-129 464.2 385 61.8
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 1.7e-128 463.4 399 61.4
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 2.2e-128 463.0 402 60.0
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 3.7e-128 462.2 400 58.5
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 4.9e-128 461.8 387 59.2
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 6.3e-128 461.5 402 59.0
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 4.1e-127 458.8 398 59.3
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 3.5e-126 455.7 386 60.6
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 7.8e-126 454.5 392 59.9
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 1.0e-125 454.1 394 60.7
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 2.3e-125 453.0 404 60.1
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 2.3e-125 453.0 406 60.8
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 4.3e-124 448.7 399 60.2
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 5.6e-124 448.4 398 60.1
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 1.6e-123 446.8 389 57.6
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 2.1e-123 446.4 399 59.4
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 2.1e-123 446.4 379 60.7
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 2.8e-123 446.0 395 60.3
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 6.1e-123 444.9 407 57.7
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 8.0e-123 444.5 420 56.2
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 1.4e-122 443.7 359 62.4
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 4.0e-122 442.2 407 57.7
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 5.2e-122 441.8 396 58.1
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 4.4e-121 438.7 397 59.7
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 4.4e-121 438.7 394 60.2
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 7.5e-121 438.0 364 59.9
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 1.4e-119 433.7 408 57.6
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 3.2e-119 432.6 393 61.6
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 1.2e-118 430.6 390 56.7
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 2.7e-118 429.5 392 56.9
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 3.5e-118 429.1 396 56.8
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 1.7e-117 426.8 389 55.5
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 5.0e-117 425.2 389 55.8
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 6.6e-117 424.9 382 57.3
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 7.3e-116 421.4 383 55.6
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 2.8e-115 419.5 406 57.4
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 6.2e-115 418.3 406 54.7
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.7e-112 410.2 414 57.2
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 4.9e-112 408.7 383 55.6
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 6.4e-112 408.3 383 55.1
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 6.4e-112 408.3 378 56.9
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.1e-111 407.5 386 54.1
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.0e-105 386.7 379 53.6
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.7e-104 383.6 422 49.8
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 2.9e-104 382.9 286 65.4
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 1.1e-103 380.9 380 53.4
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 2.4e-103 379.8 424 51.2
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 3.2e-103 379.4 344 58.4
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 2.7e-94 349.7 358 55.0
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 4.6e-94 349.0 401 48.4
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 2.4e-90 336.7 297 57.2
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 6.0e-86 322.0 299 55.9
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 1.6e-83 313.9 304 55.6
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 2.9e-80 303.1 410 42.2
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 4.9e-80 302.4 333 50.5
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 6.4e-80 302.0 289 54.0
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.4e-79 300.8 276 56.5
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 3.5e-78 296.2 396 41.2
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 8.7e-77 291.6 411 43.6
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 2.5e-76 290.0 362 45.0
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.4e-74 284.3 279 49.8
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 4.6e-70 269.2 344 44.2
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 4.6e-70 269.2 185 69.2
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 7.4e-68 261.9 208 61.1
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.5e-57 227.6 185 64.9
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 7.2e-55 218.8 414 33.6
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 7.2e-55 218.8 192 54.7
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 1.2e-54 218.0 353 38.0
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 2.3e-53 213.8 227 52.9
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 3.4e-49 199.9 279 43.4
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 4.1e-42 176.4 110 80.9
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 1.8e-37 161.0 188 46.8
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 5.2e-37 159.5 165 50.3
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.5e-31 141.4 101 69.3
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 3.1e-26 123.6 88 69.3
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 4.5e-25 119.8 116 55.2
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 4.7e-22 109.8 120 50.0
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.0e-21 108.6 128 50.0
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 6.6e-16 89.4 65 60.0
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 1.6e-14 84.7 66 56.1
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.6e-14 84.7 67 65.7
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 2.6e-12 77.4 56 73.2
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 2.2e-11 74.3 44 86.4
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.8e-11 73.9 61 65.6
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.3e-08 65.1 53 50.9
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.3e-08 65.1 53 50.9
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 9.5e-07 58.9 66 47.0


User provided reference genes

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