Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 7.1e-122 440.7 228 100.0
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 5.8e-92 341.3 219 84.9
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 8.2e-86 320.9 168 96.4
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 3.1e-85 318.9 175 90.3
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 5.3e-85 318.2 168 94.6
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 5.3e-85 318.2 168 94.6
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 6.9e-85 317.8 168 95.2
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 9.0e-85 317.4 168 94.6
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 1.2e-84 317.0 168 93.5
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 2.0e-84 316.2 168 94.0
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 2.0e-84 316.2 168 94.0
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 2.6e-84 315.8 168 93.5
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 5.8e-84 314.7 168 92.9
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 5.8e-84 314.7 168 92.9
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 7.6e-84 314.3 168 93.5
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.0e-83 313.9 168 93.5
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 1.0e-83 313.9 168 92.9
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.3e-83 313.5 167 94.0
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.3e-83 313.5 167 94.0
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 1.3e-83 313.5 167 94.0
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.3e-83 313.5 168 92.9
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.3e-83 313.5 168 92.9
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 1.7e-83 313.2 168 93.5
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 2.2e-83 312.8 168 92.9
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 2.9e-83 312.4 168 92.9
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 3.8e-83 312.0 168 92.9
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 3.8e-83 312.0 168 92.9
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 3.8e-83 312.0 168 92.3
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 3.8e-83 312.0 168 92.9
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 6.5e-83 311.2 168 92.3
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 6.5e-83 311.2 168 92.3
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 6.5e-83 311.2 168 92.9
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 6.5e-83 311.2 165 95.2
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 6.5e-83 311.2 168 92.3
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 8.4e-83 310.8 168 92.9
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 8.4e-83 310.8 168 91.7
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 8.4e-83 310.8 168 91.7
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 1.4e-82 310.1 166 94.0
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 1.9e-82 309.7 168 92.9
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 2.5e-82 309.3 168 91.7
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 4.2e-82 308.5 168 91.1
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 4.2e-82 308.5 168 91.1
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 4.2e-82 308.5 168 91.1
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 5.5e-82 308.1 168 91.1
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 5.5e-82 308.1 167 92.2
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 7.1e-82 307.8 168 91.7
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 7.1e-82 307.8 168 91.1
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 9.3e-82 307.4 168 91.7
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 9.3e-82 307.4 168 91.1
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 9.3e-82 307.4 168 91.1
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 9.3e-82 307.4 168 91.1
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 9.3e-82 307.4 168 91.1
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 9.3e-82 307.4 168 91.1
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 1.2e-81 307.0 168 91.1
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.6e-81 306.6 168 90.5
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 2.1e-81 306.2 168 91.1
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 2.1e-81 306.2 168 91.1
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 2.1e-81 306.2 168 90.5
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 2.7e-81 305.8 167 91.0
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.5e-81 305.4 174 89.7
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.8e-80 303.1 168 89.3
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 2.3e-80 302.8 168 89.9
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 5.1e-80 301.6 166 90.4
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 5.1e-80 301.6 169 90.5
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 5.1e-80 301.6 192 81.2
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 6.7e-80 301.2 169 90.5
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.9e-79 299.7 181 85.1
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 4.3e-79 298.5 169 89.3
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 7.4e-79 297.7 181 84.5
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.6e-78 296.6 168 89.9
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.8e-78 295.8 188 83.0
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 8.2e-78 294.3 167 88.6
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 4.1e-77 292.0 168 86.3
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 1.2e-76 290.4 156 91.7
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 3.4e-76 288.9 167 86.8
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 4.5e-76 288.5 156 92.9
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.4e-74 283.5 175 84.6
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 5.5e-74 281.6 150 93.3
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 1.6e-73 280.0 163 86.5
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 2.7e-73 279.3 161 87.6
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 6.1e-73 278.1 150 91.3
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 7.9e-73 277.7 150 91.3
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 1.4e-72 276.9 146 95.2
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 5.7e-71 271.6 168 79.2
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 2.2e-70 269.6 146 91.1
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.8e-70 269.2 146 92.5
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 9.1e-69 264.2 139 93.5
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 9.1e-69 264.2 148 89.2
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 7.7e-68 261.2 148 87.8
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 2.2e-67 259.6 140 92.1
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 3.8e-67 258.8 139 91.4
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 5.5e-66 255.0 168 79.2
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.7e-65 251.9 260 57.3
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 2.3e-64 249.6 163 79.8
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 8.8e-64 247.7 168 80.4
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.4e-61 240.4 128 93.8
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 1.4e-61 240.4 168 77.4
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 1.5e-60 236.9 129 93.0
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 1.4e-56 223.8 228 59.6
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 5.2e-56 221.9 124 91.1
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 2.0e-55 219.9 231 57.1
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 2.6e-55 219.5 129 86.0
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 7.4e-55 218.0 119 93.3
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 7.4e-55 218.0 119 93.3
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 8.5e-51 204.5 168 61.3
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.1e-50 204.1 110 93.6
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 1.2e-49 200.7 109 91.7
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 2.5e-42 176.4 175 53.1
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 9.4e-42 174.5 115 79.1
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 4.0e-40 169.1 165 60.0
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 2.8e-33 146.4 117 66.7
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 5.2e-32 142.1 75 92.0
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.5e-31 140.6 74 91.9
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 2.6e-31 139.8 74 91.9
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 4.7e-25 119.0 73 80.8
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 8.9e-24 114.8 60 91.7
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 4.4e-23 112.5 69 85.5
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 1.1e-18 97.8 50 92.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.6e-12 77.4 37 91.9
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.3e-10 69.3 38 84.2
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 3.4e-07 59.7 55 61.8


User provided reference genes

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