Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016153 Chenopodium quinoa HOM05D000947 ORTHO05D000079 1.5e-43 179.1 91 100.0
Ah.04g154950 Amaranthus hybridus HOM05D000947 ORTHO05D000079 6.7e-15 84.0 54 85.2
AUR62035068 Chenopodium quinoa HOM05D000947 ORTHO05D000079 8.8e-15 83.6 44 100.0
Hund03096 Selenicereus undatus HOM05D000947 ORTHO05D000079 2.5e-14 82.0 54 83.3
THA.LOC104818898 Tarenaya hassleriana HOM05D000947 ORTHO05D000079 2.4e-12 75.5 60 73.3
CANSAT78G2367 Cannabis sativa HOM05D000947 ORTHO05D000079 3.1e-12 75.1 54 79.6
CiPaw.01G142600 Carya illinoinensis HOM05D000947 ORTHO05D000079 3.1e-12 75.1 54 79.6
Manes.03G201300 Manihot esculenta HOM05D000947 ORTHO05D000079 3.1e-12 75.1 54 77.8
Manes.15G007100 Manihot esculenta HOM05D000947 ORTHO05D000079 3.1e-12 75.1 54 77.8
Atru.chr4.2949 Acer truncatum HOM05D000947 ORTHO05D000079 4.1e-12 74.7 54 75.9
ClCG05G006370 Citrullus lanatus HOM05D000947 ORTHO05D000079 6.9e-12 73.9 51 82.4
COL.COLO4_34678 Corchorus olitorius HOM05D000947 ORTHO05D000079 6.9e-12 73.9 54 75.9
Duzib052G0902 Durio zibethinus HOM05D000947 ORTHO05D000079 6.9e-12 73.9 54 75.9
MD13G1159000 Malus domestica HOM05D000947 ORTHO05D000079 6.9e-12 73.9 54 77.8
MD16G1159200 Malus domestica HOM05D000947 ORTHO05D000079 6.9e-12 73.9 54 75.9
Prupe.1G126000 Prunus persica HOM05D000947 ORTHO05D000079 6.9e-12 73.9 54 77.8
Sed0004649 Sechium edule HOM05D000947 ORTHO05D000079 6.9e-12 73.9 51 82.4
Cpa.g.sc9.102 Carica papaya HOM05D000947 ORTHO05D000079 9.1e-12 73.6 51 78.4
Cfa015476 Carpinus fangiana HOM05D000947 ORTHO05D000079 1.2e-11 73.2 54 77.8
Haze_01093 Corylus avellana HOM05D000947 ORTHO05D000079 1.2e-11 73.2 54 77.8
THA.LOC104802699 Tarenaya hassleriana HOM05D000947 ORTHO05D000079 1.2e-11 73.2 60 71.7
TWI09G0287 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 1.2e-11 73.2 54 77.8
TWI73G0953 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 1.2e-11 73.2 54 77.8
Duzib151G1181 Durio zibethinus HOM05D000947 ORTHO05D000079 1.5e-11 72.8 51 78.4
Sabra08G0149800 Salix brachista HOM05D000947 ORTHO05D000079 1.5e-11 72.8 54 75.9
Sabra10G0001000 Salix brachista HOM05D000947 ORTHO05D000079 1.5e-11 72.8 54 74.1
QL06p011255 Quercus lobata HOM05D000947 ORTHO05D000079 2.0e-11 72.4 50 80.0
Ciclev10006161m.g Citrus clementina HOM05D000947 ORTHO05D000079 3.4e-11 71.6 54 75.9
Thecc.04G294500 Theobroma cacao HOM05D000947 ORTHO05D000079 3.4e-11 71.6 54 75.9
TWI53G1518 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 3.4e-11 71.6 73 61.6
Sed0006924 Sechium edule HOM05D000947 ORTHO05D000079 5.9e-11 70.9 51 76.5
Sc25g0003460 Simmondsia chinensis HOM05D000947 ORTHO05D000079 5.9e-11 70.9 58 70.7
MELO3C006696.2 Cucumis melo HOM05D000947 ORTHO05D000079 7.7e-11 70.5 51 80.4
CsaV3_3G015000 Cucumis sativus L. HOM05D000947 ORTHO05D000079 7.7e-11 70.5 51 80.4
FvH4_4g19260 Fragaria vesca HOM05D000947 ORTHO05D000079 7.7e-11 70.5 54 75.9
FAN07G1787 Fragaria x ananassa HOM05D000947 ORTHO05D000079 7.7e-11 70.5 54 75.9
FAN12G1806 Fragaria x ananassa HOM05D000947 ORTHO05D000079 7.7e-11 70.5 54 75.9
FAN12G3889 Fragaria x ananassa HOM05D000947 ORTHO05D000079 7.7e-11 70.5 54 75.9
RcHm_v2.0_Chr4g0424251 Rosa chinensis HOM05D000947 ORTHO05D000079 7.7e-11 70.5 54 75.9
BolC1t05589H Brassica oleracea HOM05D000947 ORTHO05D000079 1.0e-10 70.1 62 71.0
Duzib212G0811 Durio zibethinus HOM05D000947 ORTHO05D000079 1.0e-10 70.1 54 70.4
Potri.010G001300 Populus trichocarpa HOM05D000947 ORTHO05D000079 1.0e-10 70.1 54 72.2
Gohir.D02G057800 Gossypium hirsutum HOM05D000947 ORTHO05D000079 1.3e-10 69.7 54 72.2
Gorai.005G065300 Gossypium raimondii HOM05D000947 ORTHO05D000079 1.3e-10 69.7 54 72.2
GSVIVG01035048001 Vitis vinifera HOM05D000947 ORTHO05D000079 1.3e-10 69.7 54 72.2
AL3G17850 Arabidopsis lyrata HOM05D000947 ORTHO05D000079 2.2e-10 68.9 61 70.5
Gohir.A01G033700 Gossypium hirsutum HOM05D000947 ORTHO05D000079 3.8e-10 68.2 58 65.5
BcaC09g47916 Brassica carinata HOM05D000947 ORTHO05D000079 5.0e-10 67.8 55 74.5
Thhalv10005103m.g Eutrema salsugineum HOM05D000947 ORTHO05D000079 5.0e-10 67.8 83 55.4
Gohir.D01G023517 Gossypium hirsutum HOM05D000947 ORTHO05D000079 5.0e-10 67.8 58 65.5
Gorai.002G029400 Gossypium raimondii HOM05D000947 ORTHO05D000079 5.0e-10 67.8 58 65.5
AT3G06740 Arabidopsis thaliana HOM05D000947 ORTHO05D000079 8.5e-10 67.0 61 68.9
Aa31LG11G7830 Aethionema arabicum HOM05D000947 ORTHO05D000079 1.1e-09 66.6 82 50.0
Carub.0003s0628 Capsella rubella HOM05D000947 ORTHO05D000079 1.1e-09 66.6 61 68.9
Sp3g05710 Schrenkiella parvula HOM05D000947 ORTHO05D000079 1.4e-09 66.2 56 67.9
Dinv02069 Davidia involucrata HOM05D000947 ORTHO05D000079 4.2e-09 64.7 54 68.5
Thhalv10021708m.g Eutrema salsugineum HOM05D000947 ORTHO05D000079 4.2e-09 64.7 55 70.9
Sp2g19650 Schrenkiella parvula HOM05D000947 ORTHO05D000079 7.2e-09 63.9 82 52.4
vmacro08079 Vaccinium macrocarpon HOM05D000947 ORTHO05D000079 7.2e-09 63.9 54 70.4
BcaC05g30554 Brassica carinata HOM05D000947 ORTHO05D000079 1.2e-08 63.2 55 70.9
Lalb_Chr13g0298321 Lupinus albus HOM05D000947 ORTHO05D000079 1.6e-08 62.8 54 68.5
CSS0047505 Camellia sinensis var. sinensis HOM05D000947 ORTHO05D000079 2.1e-08 62.4 54 66.7
Lj3A827T61 Lonicera japonica HOM05D000947 ORTHO05D000079 2.1e-08 62.4 56 69.6
Actinidia13373 Actinidia chinensis HOM05D000947 ORTHO05D000079 2.7e-08 62.0 54 64.8
Rhsim02G0006100 Rhododendron simsii HOM05D000947 ORTHO05D000079 2.7e-08 62.0 54 64.8
Dinv44322 Davidia involucrata HOM05D000947 ORTHO05D000079 3.6e-08 61.6 86 48.8
Hma1.2p1_0013F.1_g008970 Hydrangea macrophylla HOM05D000947 ORTHO05D000079 3.6e-08 61.6 54 66.7
Lj4g0003510 Lotus japonicus HOM05D000947 ORTHO05D000079 4.7e-08 61.2 51 70.6
C02p57190 Brassica napus HOM05D000947 ORTHO05D000079 7.9e-08 60.5 66 60.6
CSS0018452 Camellia sinensis var. sinensis HOM05D000947 ORTHO05D000079 7.9e-08 60.5 52 69.2
Eucgr.A00193 Eucalyptus grandis HOM05D000947 ORTHO05D000079 7.9e-08 60.5 54 66.7
Potri.008G213900 Populus trichocarpa HOM05D000947 ORTHO05D000079 7.9e-08 60.5 49 71.4
Peaxi162Scf00017g00611 Petunia axillaris HOM05D000947 ORTHO05D000079 1.0e-07 60.1 57 61.4
Lalb_Chr12g0200991 Lupinus albus HOM05D000947 ORTHO05D000079 1.4e-07 59.7 54 64.8
TAR362G0689 Trochodendron aralioides HOM05D000947 ORTHO05D000079 1.4e-07 59.7 54 64.8
vmacro15201 Vaccinium macrocarpon HOM05D000947 ORTHO05D000079 1.4e-07 59.7 54 63.0
BcaC03g17712 Brassica carinata HOM05D000947 ORTHO05D000079 1.8e-07 59.3 60 61.7
Dinv24417 Davidia involucrata HOM05D000947 ORTHO05D000079 1.8e-07 59.3 52 67.3
Hma1.2p1_0078F.1_g040180 Hydrangea macrophylla HOM05D000947 ORTHO05D000079 3.0e-07 58.5 51 68.6
Nn4g25675 Nelumbo nucifera HOM05D000947 ORTHO05D000079 3.0e-07 58.5 55 65.5
Rhsim04G0231900 Rhododendron simsii HOM05D000947 ORTHO05D000079 3.9e-07 58.2 54 63.0
BcaB07g34146 Brassica carinata HOM05D000947 ORTHO05D000079 5.1e-07 57.8 65 55.4
Actinidia14268 Actinidia chinensis HOM05D000947 ORTHO05D000079 6.7e-07 57.4 54 61.1
Actinidia21512 Actinidia chinensis HOM05D000947 ORTHO05D000079 8.8e-07 57.0 53 64.2
TAR636G3276 Trochodendron aralioides HOM05D000947 ORTHO05D000079 8.8e-07 57.0 54 63.0
AL8G22900 Arabidopsis lyrata HOM05D000947 ORTHO05D000079 1.1e-06 56.6 54 64.8
Psat0s1646g0400 Pisum sativum HOM05D000947 ORTHO05D000079 2.0e-06 55.8 51 64.7
AT5G49300 Arabidopsis thaliana HOM05D000947 ORTHO05D000079 2.6e-06 55.5 54 64.8
EL10Ac3g04929 Beta vulgaris HOM05D000947 ORTHO05D000079 2.6e-06 55.5 55 61.8
BcaNung02595 Brassica carinata HOM05D000947 ORTHO05D000079 2.6e-06 55.5 51 66.7
C07p39830 Brassica napus HOM05D000947 ORTHO05D000079 2.6e-06 55.5 51 66.7
BolC7t44511H Brassica oleracea HOM05D000947 ORTHO05D000079 2.6e-06 55.5 51 66.7
Carub.0008s0911 Capsella rubella HOM05D000947 ORTHO05D000079 2.6e-06 55.5 58 62.1
PSO302G0305 Papaver somniferum HOM05D000947 ORTHO05D000079 2.6e-06 55.5 54 64.8
A02p37990 Brassica napus HOM05D000947 ORTHO05D000079 5.7e-06 54.3 60 58.3
ClCG06G004790 Citrullus lanatus HOM05D000947 ORTHO05D000079 5.7e-06 54.3 57 56.1
CsaV3_6G022580 Cucumis sativus L. HOM05D000947 ORTHO05D000079 5.7e-06 54.3 57 56.1
Medtr4g121110 Medicago truncatula HOM05D000947 ORTHO05D000079 5.7e-06 54.3 51 62.7
TWI12G0164 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 5.7e-06 54.3 47 61.7
MELO3C021288.2 Cucumis melo HOM05D000947 ORTHO05D000079 7.4e-06 53.9 57 56.1
Nitab4.5_0000570g0300 Nicotiana tabacum HOM05D000947 ORTHO05D000079 7.4e-06 53.9 52 61.5
Nitab4.5_0003484g0090 Nicotiana tabacum HOM05D000947 ORTHO05D000079 7.4e-06 53.9 52 61.5
PSO170G5280 Papaver somniferum HOM05D000947 ORTHO05D000079 7.4e-06 53.9 51 66.7
THA.LOC104820276 Tarenaya hassleriana HOM05D000947 ORTHO05D000079 7.4e-06 53.9 49 69.4
CARHR182300 Cardamine hirsuta HOM05D000947 ORTHO05D000079 9.7e-06 53.5 58 62.1
ECA246G1347 Erigeron canadensis HOM05D000947 ORTHO05D000079 9.7e-06 53.5 60 53.3
vmacro19717 Vaccinium macrocarpon HOM05D000947 ORTHO05D000079 9.7e-06 53.5 53 64.2


User provided reference genes

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