Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.6e-97 358.2 179 100.0
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.9e-93 345.9 178 96.6
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 4.2e-77 291.6 175 79.4
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 4.8e-73 278.1 176 75.0
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 1.3e-67 260.0 174 71.3
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 8.7e-67 257.3 174 70.1
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 4.3e-66 255.0 174 70.7
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 5.6e-66 254.6 174 69.0
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 7.4e-66 254.2 175 67.4
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 9.6e-66 253.8 174 69.0
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.3e-65 253.4 175 66.9
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.6e-65 253.1 175 66.9
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 2.1e-65 252.7 175 67.4
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 3.7e-65 251.9 175 69.7
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 6.2e-65 251.1 177 65.5
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 1.4e-64 250.0 175 66.9
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 3.1e-64 248.8 175 68.0
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 5.3e-64 248.1 173 68.2
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 9.0e-64 247.3 172 67.4
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 1.2e-63 246.9 175 65.7
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 1.5e-63 246.5 174 67.2
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 2.0e-63 246.1 176 65.3
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 2.6e-63 245.7 176 65.9
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 3.4e-63 245.4 177 66.1
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 3.4e-63 245.4 175 65.7
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 4.5e-63 245.0 176 66.5
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 5.8e-63 244.6 175 65.7
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 5.8e-63 244.6 174 67.8
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 7.6e-63 244.2 174 64.9
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 1.0e-62 243.8 177 65.5
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 2.2e-62 242.7 175 64.6
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 2.9e-62 242.3 176 67.6
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 3.8e-62 241.9 173 66.5
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 4.9e-62 241.5 173 66.5
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 4.9e-62 241.5 173 65.9
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 6.5e-62 241.1 175 68.0
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 6.5e-62 241.1 177 63.8
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 8.4e-62 240.7 175 66.9
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 8.4e-62 240.7 177 63.3
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.4e-61 240.0 173 68.2
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 1.9e-61 239.6 174 67.8
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 2.5e-61 239.2 185 63.8
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 3.2e-61 238.8 158 73.4
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 3.2e-61 238.8 175 63.4
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 4.2e-61 238.4 173 67.6
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 7.1e-61 237.7 173 64.2
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 7.1e-61 237.7 172 63.4
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 7.1e-61 237.7 172 65.1
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 9.3e-61 237.3 175 64.0
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 1.2e-60 236.9 184 64.7
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 1.6e-60 236.5 172 66.9
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 1.6e-60 236.5 185 63.8
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 1.6e-60 236.5 174 64.4
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 2.7e-60 235.7 178 63.5
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 3.5e-60 235.3 174 65.5
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 6.0e-60 234.6 172 65.1
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 7.9e-60 234.2 174 62.1
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 1.3e-59 233.4 175 64.6
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 1.8e-59 233.0 172 65.1
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 3.9e-59 231.9 174 63.8
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 3.9e-59 231.9 172 62.8
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 8.7e-59 230.7 172 63.4
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 1.5e-58 229.9 176 60.8
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 3.3e-58 228.8 174 62.1
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 4.3e-58 228.4 173 66.5
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 4.3e-58 228.4 172 63.4
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 9.6e-58 227.3 176 62.5
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 9.6e-58 227.3 176 63.1
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 1.6e-57 226.5 175 60.6
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 2.1e-57 226.1 174 60.3
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 2.8e-57 225.7 172 62.2
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 6.2e-57 224.6 172 62.2
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 8.2e-57 224.2 176 61.9
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 8.2e-57 224.2 175 61.7
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 1.4e-56 223.4 174 62.6
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 4.0e-56 221.9 174 60.9
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 4.0e-56 221.9 174 62.1
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 4.0e-56 221.9 176 61.4
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 5.3e-56 221.5 174 61.5
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 6.9e-56 221.1 171 63.2
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 1.2e-55 220.3 146 71.9
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.2e-55 220.3 175 61.1
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 2.6e-55 219.2 174 58.6
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 3.4e-55 218.8 175 58.3
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 4.5e-55 218.4 171 64.3
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 1.7e-54 216.5 174 60.3
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.7e-54 216.5 174 59.2
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 3.8e-54 215.3 174 59.8
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 5.0e-54 214.9 171 62.6
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 6.5e-54 214.5 174 60.3
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 8.4e-54 214.2 166 66.9
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 1.1e-53 213.8 172 59.3
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 1.4e-53 213.4 174 59.8
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 1.4e-53 213.4 174 59.8
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 1.4e-53 213.4 174 59.8
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 2.5e-53 212.6 175 61.1
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 1.2e-52 210.3 232 47.0
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.6e-52 209.9 154 65.6
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 2.7e-52 209.1 171 60.8
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 2.7e-52 209.1 176 55.7
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 1.3e-49 200.3 160 59.4
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 6.9e-48 194.5 174 55.2
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 4.5e-47 191.8 174 55.2
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 6.1e-44 181.4 173 50.9
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 3.9e-43 178.7 166 54.2
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 3.3e-42 175.6 136 61.8
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 1.7e-41 173.3 176 50.0
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 2.2e-41 172.9 182 45.6
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 1.2e-39 167.2 178 48.9
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 7.7e-39 164.5 172 48.3
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 3.2e-37 159.1 176 46.0
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 4.2e-37 158.7 174 46.0
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 4.2e-37 158.7 178 46.6
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.6e-36 156.8 112 67.0
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 7.9e-36 154.5 161 49.1
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.4e-32 142.9 164 45.7
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 4.1e-32 142.1 176 44.3
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 2.6e-26 122.9 95 61.1
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 4.4e-26 122.1 92 64.1
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 9.7e-26 120.9 82 68.3
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 3.0e-19 99.4 180 30.6
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 5.4e-16 88.6 49 83.7
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 1.5e-13 80.5 193 31.1
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 3.0e-11 72.8 67 56.7
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 1.5e-10 70.5 79 48.1
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 8.3e-09 64.7 43 65.1
PSO782G2289 Papaver somniferum HOM05D000256 ORTHO05D000119 1.2e-07 60.8 46 56.5


User provided reference genes

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