Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.2e-51 205.3 100 100.0
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 1.4e-50 202.6 100 98.0
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 3.7e-43 177.9 108 82.4
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 6.0e-33 144.1 93 83.9
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 3.0e-32 141.7 81 86.4
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 6.6e-32 140.6 89 79.8
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 8.7e-32 140.2 81 85.2
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 8.7e-32 140.2 81 85.2
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 8.7e-32 140.2 81 85.2
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 8.7e-32 140.2 107 68.2
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 8.7e-32 140.2 81 85.2
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 8.7e-32 140.2 83 81.9
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 8.7e-32 140.2 99 69.7
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 8.7e-32 140.2 81 79.0
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 1.1e-31 139.8 90 78.9
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 1.1e-31 139.8 89 80.9
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.5e-31 139.4 80 85.0
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 1.9e-31 139.0 85 78.8
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 2.5e-31 138.7 107 69.2
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 2.5e-31 138.7 89 74.2
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 3.3e-31 138.3 100 70.0
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 3.3e-31 138.3 89 76.4
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 3.3e-31 138.3 87 77.0
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 4.3e-31 137.9 81 84.0
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 4.3e-31 137.9 81 84.0
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 4.3e-31 137.9 81 84.0
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 4.3e-31 137.9 74 87.8
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 4.3e-31 137.9 101 70.3
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 5.6e-31 137.5 109 68.8
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 5.6e-31 137.5 102 69.6
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 5.6e-31 137.5 99 68.7
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 7.3e-31 137.1 81 81.5
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 9.6e-31 136.7 80 81.2
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 1.3e-30 136.3 92 70.7
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 1.3e-30 136.3 82 80.5
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 1.3e-30 136.3 81 79.0
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.3e-30 136.3 101 68.3
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 1.3e-30 136.3 78 87.2
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 2.1e-30 135.6 78 85.9
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 2.1e-30 135.6 100 67.0
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 2.8e-30 135.2 79 81.0
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 3.6e-30 134.8 81 81.5
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 4.8e-30 134.4 93 76.3
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 4.8e-30 134.4 93 76.3
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 6.2e-30 134.0 71 87.3
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 8.1e-30 133.7 74 85.1
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 8.1e-30 133.7 78 84.6
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 8.1e-30 133.7 78 84.6
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 8.1e-30 133.7 91 70.3
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 1.1e-29 133.3 76 85.5
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 1.1e-29 133.3 100 70.0
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 1.4e-29 132.9 101 67.3
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 1.8e-29 132.5 82 78.0
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 1.8e-29 132.5 79 78.5
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 1.8e-29 132.5 80 81.2
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 2.4e-29 132.1 76 86.8
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 2.4e-29 132.1 78 83.3
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 2.4e-29 132.1 101 67.3
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 3.1e-29 131.7 91 71.4
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 3.1e-29 131.7 77 83.1
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 3.1e-29 131.7 77 83.1
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 3.1e-29 131.7 88 71.6
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 5.3e-29 131.0 101 66.3
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 6.9e-29 130.6 84 76.2
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 9.0e-29 130.2 95 65.3
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 1.2e-28 129.8 109 66.1
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.2e-28 129.8 77 83.1
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.2e-28 129.8 77 83.1
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 1.5e-28 129.4 87 72.4
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 1.5e-28 129.4 82 78.0
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 1.5e-28 129.4 107 64.5
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 2.0e-28 129.0 83 75.9
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 2.0e-28 129.0 86 73.3
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 2.6e-28 128.6 80 78.8
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 4.4e-28 127.9 77 77.9
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 5.8e-28 127.5 107 61.7
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 5.8e-28 127.5 95 69.5
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 7.6e-28 127.1 88 70.5
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 7.6e-28 127.1 74 81.1
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 1.3e-27 126.3 80 73.8
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 1.3e-27 126.3 76 81.6
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 1.7e-27 125.9 74 82.4
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 1.7e-27 125.9 77 79.2
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 3.8e-27 124.8 74 79.7
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 8.4e-27 123.6 74 79.7
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 5.4e-26 120.9 78 74.4
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 7.1e-26 120.6 74 81.1
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 1.2e-25 119.8 76 73.7
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 2.7e-25 118.6 77 71.4
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 3.5e-25 118.2 76 73.7
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 4.6e-25 117.9 108 60.2
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.0e-24 116.7 67 74.6
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 1.0e-24 116.7 85 67.1
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 1.3e-24 116.3 62 83.9
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 2.3e-24 115.5 106 51.9
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 6.6e-24 114.0 66 78.8
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 3.3e-23 111.7 62 80.6
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 1.3e-22 109.8 104 57.7
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.1e-21 106.7 90 58.9
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 5.3e-21 104.4 92 58.7
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 9.0e-21 103.6 85 60.0
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 1.7e-19 99.4 65 70.8
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 3.2e-18 95.1 69 63.8
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 9.0e-13 77.0 46 78.3
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 1.2e-12 76.6 63 54.0
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 1.4e-10 69.7 82 50.0
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 1.0e-08 63.5 50 70.0
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 1.0e-08 63.5 40 77.5
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 5.1e-08 61.2 58 58.6
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 7.4e-07 57.4 43 74.4
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 2.1e-06 55.8 50 64.0


User provided reference genes

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