Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 9.2e-81 303.5 156 100.0
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 3.0e-63 245.4 156 81.4
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 2.1e-61 239.2 156 81.4
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 3.6e-61 238.4 128 94.5
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 1.3e-58 229.9 156 76.9
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 2.2e-58 229.2 156 76.9
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 2.2e-58 229.2 156 76.9
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 5.4e-57 224.6 157 75.2
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 5.4e-57 224.6 156 72.4
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 7.1e-57 224.2 152 77.0
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 9.3e-57 223.8 128 89.1
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 9.3e-57 223.8 156 73.7
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 1.2e-56 223.4 156 74.4
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 1.2e-56 223.4 157 75.8
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 4.6e-56 221.5 157 73.9
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 1.3e-55 219.9 129 89.1
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 1.3e-55 219.9 156 71.8
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.3e-55 219.2 156 73.1
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 2.3e-55 219.2 156 72.4
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 3.0e-55 218.8 156 71.8
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 1.1e-54 216.9 152 74.3
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.5e-54 216.5 156 71.2
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 1.5e-54 216.5 156 70.5
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 1.9e-54 216.1 156 71.8
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 2.5e-54 215.7 156 69.9
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 2.5e-54 215.7 135 80.7
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 4.3e-54 214.9 158 70.9
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 5.6e-54 214.5 144 79.9
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 7.4e-54 214.2 157 75.8
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 7.4e-54 214.2 142 78.9
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 9.6e-54 213.8 156 71.2
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 9.6e-54 213.8 156 73.1
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 9.6e-54 213.8 156 73.1
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 9.6e-54 213.8 134 82.1
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 9.6e-54 213.8 156 71.8
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 1.3e-53 213.4 155 69.7
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 1.6e-53 213.0 154 70.8
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 1.6e-53 213.0 156 70.5
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 2.1e-53 212.6 156 74.4
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 2.8e-53 212.2 135 84.4
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 2.8e-53 212.2 156 71.2
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 2.8e-53 212.2 145 77.9
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 3.7e-53 211.8 129 83.7
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 3.7e-53 211.8 156 69.9
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 3.7e-53 211.8 145 75.9
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 4.8e-53 211.5 127 85.0
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 6.2e-53 211.1 157 75.2
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 6.2e-53 211.1 157 73.9
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 8.1e-53 210.7 135 84.4
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 1.1e-52 210.3 144 78.5
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 1.1e-52 210.3 156 71.8
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 1.4e-52 209.9 135 83.7
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 1.8e-52 209.5 127 86.6
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.8e-52 209.5 126 87.3
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.8e-52 209.5 126 87.3
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 1.8e-52 209.5 123 85.4
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 1.8e-52 209.5 147 73.5
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 2.4e-52 209.1 155 71.0
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 3.1e-52 208.8 122 87.7
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 3.1e-52 208.8 156 68.6
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 4.0e-52 208.4 145 74.5
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 5.3e-52 208.0 144 73.6
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 5.3e-52 208.0 147 76.2
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 6.9e-52 207.6 130 81.5
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 6.9e-52 207.6 156 70.5
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 6.9e-52 207.6 144 72.9
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 6.9e-52 207.6 157 72.0
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 9.0e-52 207.2 148 73.6
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 1.2e-51 206.8 158 70.3
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 2.6e-51 205.7 136 80.1
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.6e-51 205.7 150 76.7
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 3.4e-51 205.3 115 89.6
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 3.4e-51 205.3 115 88.7
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 3.4e-51 205.3 157 70.1
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 3.4e-51 205.3 157 70.7
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 4.5e-51 204.9 136 80.1
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 4.5e-51 204.9 156 70.5
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 5.8e-51 204.5 131 81.7
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 5.8e-51 204.5 156 67.9
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 7.6e-51 204.1 137 75.9
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 7.6e-51 204.1 156 71.2
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 9.9e-51 203.8 117 88.9
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 1.3e-50 203.4 136 79.4
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 1.3e-50 203.4 156 71.8
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.7e-50 203.0 124 85.5
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 2.2e-50 202.6 136 79.4
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.2e-50 202.6 122 84.4
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.9e-50 202.2 116 89.7
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 5.5e-49 198.0 156 67.9
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 7.1e-49 197.6 157 66.2
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 9.3e-49 197.2 151 73.5
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 2.1e-48 196.1 123 79.7
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 5.1e-47 191.4 114 87.7
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 2.5e-41 172.6 128 70.3
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 4.2e-41 171.8 106 78.3
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 4.6e-40 168.3 124 70.2
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 7.9e-40 167.5 127 66.9
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 1.8e-39 166.4 143 62.2
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 1.5e-38 163.3 127 67.7
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 3.3e-38 162.2 156 58.3
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 1.3e-37 160.2 127 68.5
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 2.8e-37 159.1 104 75.0
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 6.3e-37 157.9 130 63.1
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 2.4e-36 156.0 104 72.1
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.5e-35 153.3 116 69.0
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 2.0e-35 152.9 106 73.6
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.9e-33 146.4 141 58.2
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 2.1e-32 142.9 116 65.5
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.1e-14 84.0 64 73.4
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 1.8e-12 76.6 110 41.8
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 5.3e-12 75.1 68 54.4


User provided reference genes

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