Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.0e-65 252.3 126 100.0
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 6.6e-61 237.3 126 92.9
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 3.3e-52 208.4 129 80.6
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 6.8e-50 200.7 127 78.0
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 1.5e-49 199.5 126 78.6
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 4.4e-49 198.0 125 75.2
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 5.0e-45 184.5 124 71.0
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 5.0e-45 184.5 119 75.6
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 5.0e-45 184.5 116 73.3
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 5.0e-45 184.5 117 76.1
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 8.6e-45 183.7 122 71.3
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 8.6e-45 183.7 119 72.3
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 1.1e-44 183.3 118 72.0
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 3.3e-44 181.8 119 72.3
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 5.6e-44 181.0 118 72.0
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 5.6e-44 181.0 122 68.9
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 5.6e-44 181.0 122 70.5
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 1.2e-43 179.9 119 72.3
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 2.1e-43 179.1 122 70.5
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 2.8e-43 178.7 118 72.9
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 3.6e-43 178.3 117 72.6
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 4.7e-43 177.9 118 73.7
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 8.1e-43 177.2 117 71.8
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 8.1e-43 177.2 128 66.4
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 1.4e-42 176.4 119 70.6
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 1.4e-42 176.4 117 71.8
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 1.8e-42 176.0 117 70.1
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 2.3e-42 175.6 117 70.9
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 2.3e-42 175.6 117 70.9
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 2.3e-42 175.6 117 69.2
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 3.1e-42 175.3 121 70.2
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 3.1e-42 175.3 117 73.5
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 4.0e-42 174.9 117 70.9
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 5.2e-42 174.5 119 72.3
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 6.8e-42 174.1 118 68.6
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 6.8e-42 174.1 119 68.9
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 1.2e-41 173.3 120 72.5
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.0e-41 172.6 120 72.5
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 2.0e-41 172.6 117 70.9
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 2.6e-41 172.2 117 71.8
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.6e-41 172.2 120 71.7
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 3.4e-41 171.8 135 63.7
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.4e-41 171.8 120 71.7
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 4.4e-41 171.4 117 69.2
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 4.4e-41 171.4 117 72.6
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 5.8e-41 171.0 117 70.1
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.8e-41 171.0 121 70.2
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 5.8e-41 171.0 118 72.0
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 7.5e-41 170.6 117 69.2
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 7.5e-41 170.6 118 69.5
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 9.8e-41 170.2 117 69.2
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 9.8e-41 170.2 119 69.7
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.7e-40 169.5 120 70.8
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 2.2e-40 169.1 118 69.5
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 2.9e-40 168.7 132 66.7
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 2.9e-40 168.7 118 66.9
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 4.9e-40 167.9 123 63.4
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 4.9e-40 167.9 121 62.0
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 6.4e-40 167.5 150 58.0
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 1.1e-39 166.8 117 67.5
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 1.4e-39 166.4 131 61.1
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.4e-39 165.6 120 70.0
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 2.4e-39 165.6 117 67.5
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 3.2e-39 165.2 120 66.7
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 4.1e-39 164.9 121 67.8
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 1.6e-38 162.9 122 65.6
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 1.6e-38 162.9 121 65.3
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.6e-38 162.9 118 70.3
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.1e-38 162.5 118 66.9
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 2.1e-38 162.5 117 67.5
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.1e-38 162.5 121 66.9
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 2.7e-38 162.2 117 65.0
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 3.5e-38 161.8 119 64.7
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 4.6e-38 161.4 123 64.2
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 4.6e-38 161.4 125 68.8
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 6.0e-38 161.0 117 67.5
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 7.8e-38 160.6 117 68.4
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 2.3e-37 159.1 125 65.6
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.0e-37 158.7 120 68.3
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 3.9e-37 158.3 119 63.9
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 1.9e-36 156.0 132 58.3
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 3.3e-36 155.2 120 65.0
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 9.5e-36 153.7 122 63.9
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 1.2e-35 153.3 117 63.2
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.6e-35 152.9 119 63.0
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 2.8e-35 152.1 120 61.7
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 4.7e-35 151.4 120 62.5
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 4.7e-35 151.4 118 62.7
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 4.7e-35 151.4 118 62.7
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 6.2e-35 151.0 120 61.7
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 8.1e-35 150.6 147 55.1
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 1.1e-34 150.2 120 64.2
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 1.1e-34 150.2 120 64.2
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.4e-34 149.8 117 62.4
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 1.8e-34 149.4 120 60.8
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 1.8e-34 149.4 118 61.9
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 2.3e-34 149.1 118 61.9
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 4.0e-34 148.3 118 61.0
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.0e-34 148.3 117 61.5
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 3.7e-32 141.7 120 58.3
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 5.4e-31 137.9 125 54.4
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 7.3e-28 127.5 85 69.4
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 4.7e-27 124.8 119 58.0
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 5.2e-26 121.3 127 52.8
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 8.9e-26 120.6 126 53.2
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 4.4e-25 118.2 117 54.7
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 7.1e-23 110.9 69 72.5
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.6e-22 109.8 118 46.6
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 3.6e-19 98.6 69 76.8
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 2.0e-17 92.8 55 70.9
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.4e-15 85.9 124 37.9
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 3.0e-13 79.0 118 42.4
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 5.1e-13 78.2 75 54.7
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 1.1e-12 77.0 50 66.0
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 3.6e-11 72.0 108 40.7


User provided reference genes

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