Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015897 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.3e-101 372.1 171 100.0
AUR62020326 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.6e-94 349.4 171 94.7
AUR62026058 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.2e-83 312.4 165 86.1
AUR62024467 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.3e-80 302.4 163 84.7
EL10Ac2g03007 Beta vulgaris HOM05D008188 ORTHO05D010325 5.8e-68 261.2 171 69.6
EL10Ac2g03011 Beta vulgaris HOM05D008188 ORTHO05D010325 5.8e-68 261.2 171 69.6
EL10Ac2g03009 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-67 260.0 171 69.0
EL10Ac6g15502 Beta vulgaris HOM05D008188 ORTHO05D010325 3.7e-67 258.5 171 69.6
EL10Ac6g15503 Beta vulgaris HOM05D008188 ORTHO05D010325 3.7e-67 258.5 171 69.6
EL10Ac6g15527 Beta vulgaris HOM05D008188 ORTHO05D010325 7.8e-65 250.8 162 69.1
EL10Ac6g15529 Beta vulgaris HOM05D008188 ORTHO05D010325 7.8e-65 250.8 162 69.1
EL10Ac6g15504 Beta vulgaris HOM05D008188 ORTHO05D010325 6.6e-64 247.7 162 69.1
EL10Ac5g12929 Beta vulgaris HOM05D008188 ORTHO05D010325 1.2e-62 243.4 171 66.1
AUR62015896 Chenopodium quinoa HOM05D008188 ORTHO05D010325 6.8e-61 237.7 156 72.4
EL10Ac6g15528 Beta vulgaris HOM05D008188 ORTHO05D010325 1.6e-49 199.9 124 71.0
EL10As2g23257 Beta vulgaris HOM05D008188 ORTHO05D010325 1.2e-46 190.3 150 60.0
EL10As2g23259 Beta vulgaris HOM05D008188 ORTHO05D010325 1.2e-46 190.3 150 60.0
EL10Ac4g07680 Beta vulgaris HOM05D008188 ORTHO05D010325 2.4e-45 186.0 163 55.8
EL10Ac4g07719 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-43 180.3 157 53.5
EL10Ac4g07681 Beta vulgaris HOM05D008188 ORTHO05D010325 6.0e-41 171.4 162 53.7
EL10Ac6g15505 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-40 170.2 167 52.1
EL10Ac4g07682 Beta vulgaris HOM05D008188 ORTHO05D010325 1.1e-39 167.2 168 47.0
AUR62015890 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.1e-39 167.2 163 49.1
EL10Ac6g15508 Beta vulgaris HOM05D008188 ORTHO05D010325 3.3e-39 165.6 173 49.1
EL10Ac6g15512 Beta vulgaris HOM05D008188 ORTHO05D010325 3.3e-39 165.6 173 49.1
EL10Ac6g15513 Beta vulgaris HOM05D008188 ORTHO05D010325 5.6e-39 164.9 170 50.0
EL10Ac6g15506 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-38 163.7 167 50.9
EL10Ac6g15507 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-38 163.7 167 50.9
EL10Ac6g15510 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-38 163.7 167 50.9
EL10Ac4g07667 Beta vulgaris HOM05D008188 ORTHO05D010325 3.6e-38 162.2 155 50.3
EL10As8g23832 Beta vulgaris HOM05D008188 ORTHO05D010325 4.8e-38 161.8 167 49.7
EL10Ac4g07713 Beta vulgaris HOM05D008188 ORTHO05D010325 4.0e-37 158.7 158 49.4
EL10Ac6g15514 Beta vulgaris HOM05D008188 ORTHO05D010325 9.0e-37 157.5 167 50.3
AUR62015695 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.7e-35 153.3 147 51.0
EL10Ac8g20539 Beta vulgaris HOM05D008188 ORTHO05D010325 9.3e-34 147.5 163 47.9
EL10Ac8g19709 Beta vulgaris HOM05D008188 ORTHO05D010325 3.3e-31 139.0 146 45.9
AUR62039716 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.6e-30 136.7 156 44.9
AUR62044614 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.6e-30 136.7 156 44.9
EL10Ac4g07670 Beta vulgaris HOM05D001974 ORTHO05D001995 8.1e-30 134.4 152 48.0
AUR62036266 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.0e-29 132.1 155 45.2
AUR62034788 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.3e-29 131.7 160 45.0
AUR62020330 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.4e-28 129.0 163 40.5
AUR62015892 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.3e-27 127.1 156 45.5
AUR62010294 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.8e-27 125.6 153 43.8
AUR62010295 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.8e-27 125.6 160 45.6
AUR62015894 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.9e-26 123.2 165 44.2
Ah.06g181820 Amaranthus hybridus HOM05D008188 ORTHO05D010325 4.6e-25 118.6 155 40.6
AUR62041158 Chenopodium quinoa HOM05D008188 ORTHO05D010325 6.0e-25 118.2 136 44.1
AUR62015893 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.7e-24 114.4 158 39.9
AUR62038400 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.9e-23 113.2 164 38.4
AUR62020328 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.5e-23 112.8 140 40.7
AUR62020332 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.5e-23 112.8 140 40.7
AUR62044316 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.5e-23 112.8 140 40.7
AUR62015891 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.1e-21 107.5 61 80.3
AUR62029286 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.5e-18 96.3 107 44.9
PGSC0003DMG400003733 Solanum tuberosum HOM05D000862 ORTHO05D000943 1.6e-17 93.6 156 37.8
Ah.12g061570 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.0e-16 90.9 141 40.4
QL02p008677 Quercus lobata HOM05D000862 ORTHO05D000943 2.8e-14 82.8 157 35.7
Nitab4.5_0002983g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 6.2e-14 81.6 151 33.1
CAN.G1226.20 Capsicum annuum HOM05D000862 ORTHO05D000943 8.2e-14 81.3 160 33.8
Sopen04g034000 Solanum pennellii HOM05D000862 ORTHO05D000943 8.2e-14 81.3 156 35.3
Solyc04g080420.4 Solanum lycopersicum HOM05D000862 ORTHO05D000943 1.1e-13 80.9 156 34.6
Rhsim06G0033000 Rhododendron simsii HOM05D000862 ORTHO05D000943 1.8e-13 80.1 161 33.5
EL10Ac4g07669 Beta vulgaris HOM05D001974 ORTHO05D001995 3.1e-13 79.3 157 34.4
Lsat_1_v5_gn_1_17740 Lactuca sativa HOM05D000862 ORTHO05D000943 3.1e-13 79.3 152 33.6
Nitab4.5_0003180g0070 Nicotiana tabacum HOM05D000011 ORTHO05D001721 9.0e-13 77.8 151 34.4
HanXRQChr11g0352391 Helianthus annuus HOM05D000862 ORTHO05D000943 2.6e-12 76.3 147 34.7
EL10Ac4g07715 Beta vulgaris HOM05D005485 ORTHO05D010325 3.4e-12 75.9 63 55.6
Lju427C3T2 Lonicera japonica HOM05D000862 ORTHO05D000943 3.4e-12 75.9 157 36.9
Ah.04g166220 Amaranthus hybridus HOM05D008188 ORTHO05D010325 7.6e-12 74.7 92 41.3
Ah.04g166240 Amaranthus hybridus HOM05D008188 ORTHO05D010325 7.6e-12 74.7 69 46.4
Atru.chr13.467 Acer truncatum HOM05D000862 ORTHO05D000943 1.0e-11 74.3 164 33.5
Ah.04g166210 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.0e-11 74.3 67 47.8
Ah.04g166230 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.3e-11 73.9 67 50.7
Aqoxy1G03033 Aquilegia oxysepala HOM05D000862 ORTHO05D000943 1.3e-11 73.9 163 34.4
Lju114A8G16 Lonicera japonica HOM05D000862 ORTHO05D000943 1.7e-11 73.6 152 36.8
Peaxi162Scf00417g01331 Petunia axillaris HOM05D000862 ORTHO05D000943 2.9e-11 72.8 150 32.0
Lju1609A2T33 Lonicera japonica HOM05D000862 ORTHO05D000943 5.0e-11 72.0 152 37.5
Nitab4.5_0002727g0030 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.0e-11 72.0 160 32.5
Nitab4.5_0012015g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 6.5e-11 71.6 150 33.3
AUR62010292 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.2e-10 69.3 122 34.4
Lju427C3G7 Lonicera japonica HOM05D000862 ORTHO05D000943 3.2e-10 69.3 158 34.2
Peaxi162Scf00417g01349 Petunia axillaris HOM05D000862 ORTHO05D000943 3.2e-10 69.3 156 34.6
Ah.04g166330 Amaranthus hybridus HOM05D008188 ORTHO05D010325 4.2e-10 68.9 57 54.4
Os12g0198700 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 5.5e-10 68.6 155 29.0
Solyc09g090445.1 Solanum lycopersicum HOM05D000862 ORTHO05D000943 5.5e-10 68.6 128 36.7
HanXRQChr08g0212671 Helianthus annuus HOM05D000862 ORTHO05D000943 7.1e-10 68.2 148 30.4
AUR62026059 Chenopodium quinoa HOM05D008188 ORTHO05D010325 9.3e-10 67.8 58 55.2
Nitab4.5_0002977g0140 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.2e-09 67.4 160 31.2
Nitab4.5_0005485g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.2e-09 67.4 150 30.0
PGSC0003DMG404017205 Solanum tuberosum HOM05D000862 ORTHO05D000943 1.2e-09 67.4 128 34.4
CANSAT54G1589 Cannabis sativa HOM05D000862 ORTHO05D000943 1.6e-09 67.0 158 32.9
ECA232G2505 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.6e-09 67.0 155 27.7
Sopen09g033370 Solanum pennellii HOM05D000862 ORTHO05D000943 1.6e-09 67.0 128 35.9
Nitab4.5_0009433g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.1e-09 66.6 150 30.7
SGA_v2.0_scaffold326G48727 Striga asiatica HOM05D000862 ORTHO05D000943 2.1e-09 66.6 148 31.8
Nitab4.5_0001740g0110 Nicotiana tabacum HOM05D000862 ORTHO05D000943 3.5e-09 65.9 160 31.2
Potri.017G010900 Populus trichocarpa HOM05D000862 ORTHO05D000943 3.5e-09 65.9 164 32.9
Ah.12g057670 Amaranthus hybridus HOM05D008188 ORTHO05D010325 4.6e-09 65.5 89 41.6
Nitab4.5_0002224g0030 Nicotiana tabacum HOM05D000862 ORTHO05D000943 7.9e-09 64.7 148 31.1
Nitab4.5_0005317g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.0e-08 64.3 152 28.3
HanXRQChr14g0431881 Helianthus annuus HOM05D000862 ORTHO05D000452 1.3e-08 63.9 149 28.2
Sabra17G0025900 Salix brachista HOM05D000862 ORTHO05D000943 1.3e-08 63.9 152 30.9
Atru.chr1.3874 Acer truncatum HOM05D000011 ORTHO05D002639 2.3e-08 63.2 153 31.4
HanXRQChr14g0431831 Helianthus annuus HOM05D000862 ORTHO05D000452 2.3e-08 63.2 158 27.8
HanXRQChr14g0431861 Helianthus annuus HOM05D000862 ORTHO05D000452 2.3e-08 63.2 158 27.8
Nitab4.5_0004186g0040 Nicotiana tabacum HOM05D000862 ORTHO05D000943 3.0e-08 62.8 148 30.4
Potri.005G232500 Populus trichocarpa HOM05D000862 ORTHO05D000943 3.0e-08 62.8 153 30.7
SalBow1G5233 Salvia bowleyana HOM05D000862 ORTHO05D000943 3.9e-08 62.4 154 30.5
Sed0022225 Sechium edule HOM05D000862 ORTHO05D000943 3.9e-08 62.4 147 34.0
Ah.06g182150 Amaranthus hybridus HOM05D008188 ORTHO05D010325 5.1e-08 62.0 77 44.2
CANSAT54G1423 Cannabis sativa HOM05D000862 ORTHO05D000943 5.1e-08 62.0 156 34.0
Nitab4.5_0002616g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 5.1e-08 62.0 165 30.3
Nitab4.5_0002977g0010 Nicotiana tabacum HOM05D000862 ORTHO05D000943 8.7e-08 61.2 165 30.3
Sabra02G0024100 Salix brachista HOM05D000862 ORTHO05D000943 8.7e-08 61.2 153 31.4
Sabra05G0179200 Salix brachista HOM05D000862 ORTHO05D000943 1.1e-07 60.8 153 30.7
Zm00001eb392870 Zea mays HOM05D000862 ORTHO05D000943 1.1e-07 60.8 129 29.5
Atru.chr1.3869 Acer truncatum HOM05D000862 ORTHO05D000943 1.5e-07 60.5 159 28.9
Nitab4.5_0002616g0130 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.5e-07 60.5 148 29.7
Os05g0143600 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 1.5e-07 60.5 154 27.9
Os02g0301800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.9e-07 60.1 155 29.0
Sp1g17550 Schrenkiella parvula HOM05D000862 ORTHO05D000943 1.9e-07 60.1 150 28.7
Ah.11g046620 Amaranthus hybridus HOM05D008188 ORTHO05D010325 2.5e-07 59.7 61 45.9
Os12g0247700 Oryza sativa ssp. japonica HOM05D012838 ORTHO05D000943 3.3e-07 59.3 152 25.7
Zm00001eb167140 Zea mays HOM05D000862 ORTHO05D000452 3.3e-07 59.3 130 30.8
Ah.04g166300 Amaranthus hybridus HOM05D001974 ORTHO05D001995 1.3e-06 57.4 63 39.7
Hma1.2p1_2356F.1_g320550 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 2.8e-06 56.2 171 29.2
THA.LOC104809315 Tarenaya hassleriana HOM05D000862 ORTHO05D000943 8.2e-06 54.7 121 31.4


User provided reference genes

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