Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015893 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.3e-125 453.0 212 100.0
AUR62010295 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.0e-58 229.2 127 80.3
AUR62015896 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.7e-56 222.2 221 51.6
Ah.12g061570 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.7e-40 170.2 142 57.7
AUR62034788 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.3e-39 165.2 158 50.6
EL10Ac4g07719 Beta vulgaris HOM05D008188 ORTHO05D010325 1.0e-34 151.0 219 39.3
AUR62024467 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.2e-34 148.7 261 36.4
AUR62038400 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.1e-33 147.5 150 47.3
EL10As2g23259 Beta vulgaris HOM05D008188 ORTHO05D010325 3.8e-29 132.5 217 37.8
EL10Ac6g15504 Beta vulgaris HOM05D008188 ORTHO05D010325 4.2e-28 129.0 158 43.7
EL10Ac6g15502 Beta vulgaris HOM05D008188 ORTHO05D010325 9.4e-28 127.9 157 43.9
EL10Ac6g15503 Beta vulgaris HOM05D008188 ORTHO05D010325 9.4e-28 127.9 157 43.9
EL10Ac6g15527 Beta vulgaris HOM05D008188 ORTHO05D010325 1.2e-27 127.5 157 43.3
EL10Ac6g15529 Beta vulgaris HOM05D008188 ORTHO05D010325 1.2e-27 127.5 157 43.3
EL10Ac2g03007 Beta vulgaris HOM05D008188 ORTHO05D010325 3.6e-27 125.9 157 43.3
EL10Ac2g03009 Beta vulgaris HOM05D008188 ORTHO05D010325 3.6e-27 125.9 157 43.3
EL10Ac2g03011 Beta vulgaris HOM05D008188 ORTHO05D010325 3.6e-27 125.9 157 44.6
AUR62015891 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.3e-26 123.2 131 45.8
EL10Ac5g12929 Beta vulgaris HOM05D008188 ORTHO05D010325 6.8e-26 121.7 158 42.4
AUR62026058 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.8e-26 121.3 159 42.1
Ah.12g057670 Amaranthus hybridus HOM05D008188 ORTHO05D010325 4.8e-24 115.5 82 62.2
AUR62015897 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.1e-23 114.4 158 39.9
AUR62020326 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.1e-23 114.4 158 40.5
AUR62015890 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.1e-23 112.5 159 39.0
EL10Ac4g07682 Beta vulgaris HOM05D008188 ORTHO05D010325 5.9e-22 108.6 160 35.6
AUR62015894 Chenopodium quinoa HOM05D008188 ORTHO05D010325 7.7e-22 108.2 61 77.0
PGR119G1341 Punica granatum HOM05D000862 ORTHO05D000943 5.0e-21 105.5 203 34.5
PGR119G2194 Punica granatum HOM05D000862 ORTHO05D000943 5.0e-21 105.5 203 34.5
PGR119G1637 Punica granatum HOM05D000862 ORTHO05D000943 6.5e-21 105.1 203 34.5
EL10As2g23257 Beta vulgaris HOM05D008188 ORTHO05D010325 1.6e-19 100.5 152 38.8
EL10Ac4g07680 Beta vulgaris HOM05D008188 ORTHO05D010325 2.1e-19 100.1 159 34.0
Cc01_g04380 Coffea canephora HOM05D000862 ORTHO05D000943 3.6e-19 99.4 203 31.5
EL10Ac6g15505 Beta vulgaris HOM05D008188 ORTHO05D010325 6.1e-19 98.6 164 34.1
AUR62015892 Chenopodium quinoa HOM05D008188 ORTHO05D010325 6.1e-19 98.6 58 70.7
EL10Ac4g07713 Beta vulgaris HOM05D008188 ORTHO05D010325 8.0e-19 98.2 196 31.6
EL10Ac4g07681 Beta vulgaris HOM05D008188 ORTHO05D010325 1.0e-18 97.8 155 34.8
AUR62039716 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.3e-18 96.7 156 36.5
AUR62044614 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.3e-18 96.7 156 36.5
EL10Ac6g15528 Beta vulgaris HOM05D008188 ORTHO05D010325 3.0e-18 96.3 117 43.6
EL10Ac4g07667 Beta vulgaris HOM05D008188 ORTHO05D010325 5.2e-18 95.5 152 37.5
EL10Ac4g07670 Beta vulgaris HOM05D001974 ORTHO05D001995 2.6e-17 93.2 154 37.0
AUR62010294 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.4e-17 92.8 58 69.0
AUR62036266 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.4e-17 92.8 152 36.8
PGR119G2338 Punica granatum HOM05D000862 ORTHO05D000943 3.4e-17 92.8 201 32.3
EL10Ac6g15506 Beta vulgaris HOM05D008188 ORTHO05D010325 4.4e-17 92.4 166 33.7
EL10Ac6g15507 Beta vulgaris HOM05D008188 ORTHO05D010325 4.4e-17 92.4 166 33.7
AUR62041158 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.7e-17 92.0 134 36.6
PGR119G1228 Punica granatum HOM05D000862 ORTHO05D000943 9.8e-17 91.3 201 31.8
EL10Ac6g15510 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-16 90.9 164 33.5
EL10Ac6g15508 Beta vulgaris HOM05D008188 ORTHO05D010325 1.7e-16 90.5 163 33.7
EL10Ac6g15512 Beta vulgaris HOM05D008188 ORTHO05D010325 1.7e-16 90.5 163 33.7
EL10As8g23832 Beta vulgaris HOM05D008188 ORTHO05D010325 2.2e-16 90.1 164 32.9
EL10Ac6g15513 Beta vulgaris HOM05D008188 ORTHO05D010325 2.8e-16 89.7 164 32.9
EL10Ac6g15514 Beta vulgaris HOM05D008188 ORTHO05D010325 4.9e-16 89.0 164 32.9
EL10Ac8g19709 Beta vulgaris HOM05D008188 ORTHO05D010325 6.3e-16 88.6 147 34.0
AUR62015695 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.8e-15 87.0 157 32.5
Zm00001eb167140 Zea mays HOM05D000862 ORTHO05D000452 9.2e-15 84.7 222 31.1
CANSAT54G1423 Cannabis sativa HOM05D000862 ORTHO05D000943 1.6e-14 84.0 212 29.7
Hma1.2p1_1775F.1_g301900 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.6e-14 84.0 203 30.0
AUR62020328 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.7e-14 83.2 135 33.3
AUR62020332 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.7e-14 83.2 135 33.3
AUR62044316 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.7e-14 83.2 135 33.3
Ah.06g181820 Amaranthus hybridus HOM05D008188 ORTHO05D010325 3.5e-14 82.8 151 31.8
Ah.06g182150 Amaranthus hybridus HOM05D008188 ORTHO05D010325 3.5e-14 82.8 76 47.4
Dinv39634 Davidia involucrata HOM05D001418 ORTHO05D002038 4.5e-14 82.4 154 34.4
ECA232G0731 Erigeron canadensis HOM05D000041 ORTHO05D000452 4.5e-14 82.4 208 29.3
Zm00001eb304540 Zea mays HOM05D012838 ORTHO05D000943 4.5e-14 82.4 157 33.1
CAN.G1226.20 Capsicum annuum HOM05D000862 ORTHO05D000943 5.9e-14 82.0 169 33.1
Os11g0524900 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 1.0e-13 81.3 213 31.9
PGR142G2724 Punica granatum HOM05D000005 ORTHO05D000943 1.0e-13 81.3 207 30.9
ECA232G0727 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.3e-13 80.1 217 28.6
SalBow1G5233 Salvia bowleyana HOM05D000862 ORTHO05D000943 2.3e-13 80.1 149 37.6
Eucgr.E04097 Eucalyptus grandis HOM05D000956 ORTHO05D000943 5.0e-13 79.0 208 29.3
Lsat_1_v5_gn_1_17740 Lactuca sativa HOM05D000862 ORTHO05D000943 1.1e-12 77.8 151 35.8
Lj4A511T16 Lonicera japonica HOM05D000862 ORTHO05D000943 1.1e-12 77.8 205 30.7
Zm00001eb355410 Zea mays HOM05D012838 ORTHO05D000943 1.5e-12 77.4 159 33.3
Lsat_1_v5_gn_8_102601 Lactuca sativa HOM05D000041 ORTHO05D000452 3.3e-12 76.3 223 30.9
PGR142G3142 Punica granatum HOM05D000862 ORTHO05D000943 3.3e-12 76.3 182 26.9
Atru.chr11.2300 Acer truncatum HOM05D000862 ORTHO05D000943 4.3e-12 75.9 155 32.9
AUR62029286 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.3e-12 75.9 98 37.8
Eucgr.I02393 Eucalyptus grandis HOM05D000862 ORTHO05D000943 5.6e-12 75.5 204 30.4
Lsat_1_v5_gn_8_100620 Lactuca sativa HOM05D000862 ORTHO05D000452 5.6e-12 75.5 163 31.9
Rhsim06G0033500 Rhododendron simsii HOM05D000862 ORTHO05D000943 5.6e-12 75.5 148 29.1
EL10Ac8g20539 Beta vulgaris HOM05D008188 ORTHO05D010325 9.5e-12 74.7 150 31.3
Lj4C500T2 Lonicera japonica HOM05D000862 ORTHO05D000943 1.6e-11 73.9 205 29.8
CAN.G220.50 Capsicum annuum HOM05D000862 ORTHO05D000943 2.8e-11 73.2 164 31.1
HanXRQChr11g0352391 Helianthus annuus HOM05D000862 ORTHO05D000943 4.7e-11 72.4 146 31.5
vmacro21644 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 6.1e-11 72.0 150 32.7
Lsat_1_v5_gn_0_28421 Lactuca sativa HOM05D000862 ORTHO05D000943 1.0e-10 71.2 146 30.8
HanXRQChr09g0238641 Helianthus annuus HOM05D000862 ORTHO05D000943 1.4e-10 70.9 149 34.2
CANSAT54G1589 Cannabis sativa HOM05D000862 ORTHO05D000943 1.8e-10 70.5 210 26.2
Peaxi162Scf00441g00622 Petunia axillaris HOM05D000862 ORTHO05D003588 2.3e-10 70.1 156 31.4
Os10g0132300 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D049672 6.8e-10 68.6 156 32.1
Lj1C1150G8 Lonicera japonica HOM05D000862 ORTHO05D000943 1.2e-09 67.8 204 27.9
Lju1609A2T33 Lonicera japonica HOM05D000862 ORTHO05D000943 1.2e-09 67.8 202 28.7
DCAR_003013 Daucus carota HOM05D000862 ORTHO05D003588 2.0e-09 67.0 157 31.2
Os12g0228700 Oryza sativa ssp. japonica HOM05D012838 ORTHO05D000943 2.6e-09 66.6 120 35.0
Nitab4.5_0001568g0080 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.4e-09 66.2 156 32.7
Lj3C200T6 Lonicera japonica HOM05D000041 ORTHO05D000943 8.3e-08 61.6 152 29.6
BcaB06g25745 Brassica carinata HOM05D000956 ORTHO05D001930 1.1e-07 61.2 203 28.1
Hma1.2p1_0076F.1_g039440 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.1e-07 61.2 175 25.1
PGR142G0852 Punica granatum HOM05D000862 ORTHO05D000943 1.1e-07 61.2 243 27.6
Ah.04g166220 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.4e-07 60.8 88 34.1
DCAR_011947 Daucus carota HOM05D000862 ORTHO05D003588 3.2e-07 59.7 103 35.9
A05p33060 Brassica napus HOM05D000956 ORTHO05D001930 4.1e-07 59.3 204 28.9
vmacro21642 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 4.1e-07 59.3 249 27.7
Solyc09g083030.1 Solanum lycopersicum HOM05D000862 ORTHO05D003588 5.4e-07 58.9 161 30.4
Sopen09g031900 Solanum pennellii HOM05D000862 ORTHO05D003588 5.4e-07 58.9 161 30.4
Os04g0369100 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000452 1.2e-06 57.8 163 30.1
A01p37790 Brassica napus HOM05D000956 ORTHO05D001930 2.0e-06 57.0 197 27.9
BolC1t04750H Brassica oleracea HOM05D000956 ORTHO05D001930 2.0e-06 57.0 197 27.9
C01p47830 Brassica napus HOM05D000956 ORTHO05D001930 2.7e-06 56.6 197 27.9
vmacro21643 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 4.6e-06 55.8 156 30.1
ATR0789G103 Amborella trichopoda HOM05D000862 ORTHO05D000943 5.9e-06 55.5 161 31.1
PGR142G3334 Punica granatum HOM05D000005 ORTHO05D000943 5.9e-06 55.5 178 28.7


User provided reference genes

Program Settings