Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015703 Chenopodium quinoa HOM05D009341 ORTHO05D011542 0.0e+00 1459.5 753 100.0
AUR62015705 Chenopodium quinoa HOM05D009341 ORTHO05D011542 0.0e+00 1459.5 753 100.0
AUR62020500 Chenopodium quinoa HOM05D009341 ORTHO05D011542 1.2e-295 1019.6 766 70.8
EL10Ac4g07898 Beta vulgaris HOM05D009341 ORTHO05D011542 1.8e-243 846.3 715 61.8
AUR62002825 Chenopodium quinoa HOM05D009341 ORTHO05D011542 1.9e-99 367.9 669 37.4
AUR62041055 Chenopodium quinoa HOM05D009341 ORTHO05D011542 4.3e-99 366.7 705 34.3
AUR62037424 Chenopodium quinoa HOM05D009341 ORTHO05D011542 5.4e-94 349.7 597 39.7
AUR62004981 Chenopodium quinoa HOM05D009341 ORTHO05D011542 5.1e-92 343.2 655 33.7
AUR62023668 Chenopodium quinoa HOM05D009341 ORTHO05D011542 1.0e-84 318.9 683 36.2
AUR62030514 Chenopodium quinoa HOM05D009341 ORTHO05D011542 2.4e-73 281.2 732 31.6
AUR62002844 Chenopodium quinoa HOM05D009341 ORTHO05D011542 2.9e-63 247.7 528 33.1
AUR62026598 Chenopodium quinoa HOM05D009341 ORTHO05D011542 1.1e-62 245.7 449 34.5
AUR62039017 Chenopodium quinoa HOM05D009341 ORTHO05D011542 1.1e-62 245.7 487 33.7
Ah.09g223870 Amaranthus hybridus HOM05D009341 ORTHO05D011542 2.2e-58 231.5 563 31.1
AUR62024544 Chenopodium quinoa HOM05D009341 ORTHO05D011542 2.8e-58 231.1 437 34.3
EL10Ac9g22872 Beta vulgaris HOM05D007938 ORTHO05D009929 5.3e-57 226.9 778 29.8
EL10Ac9g22873 Beta vulgaris HOM05D007938 ORTHO05D009929 9.3e-54 216.1 689 32.2
AUR62041227 Chenopodium quinoa HOM05D009341 ORTHO05D011542 1.2e-53 215.7 271 43.5
AUR62037067 Chenopodium quinoa HOM05D009341 ORTHO05D011542 2.1e-53 214.9 389 37.3
EL10Ac2g03185 Beta vulgaris HOM05D007938 ORTHO05D009929 2.5e-51 208.0 701 29.1
EL10As1g23082 Beta vulgaris HOM05D007938 ORTHO05D009929 2.6e-48 198.0 656 28.5
EL10Ac3g06645 Beta vulgaris HOM05D007938 ORTHO05D009929 5.0e-47 193.7 670 28.2
AUR62013595 Chenopodium quinoa HOM05D009341 ORTHO05D011542 4.8e-42 177.2 441 30.2
EL10Ac1g01810 Beta vulgaris HOM05D007938 ORTHO05D009069 1.4e-41 175.6 562 28.6
AUR62033804 Chenopodium quinoa HOM05D009341 ORTHO05D011542 5.3e-41 173.7 208 44.7
AUR62042729 Chenopodium quinoa HOM05D009341 ORTHO05D011542 2.2e-39 168.3 432 29.6
EL10Ac9g22333 Beta vulgaris HOM05D007938 ORTHO05D009929 1.1e-38 166.0 656 26.8
EL10Ac4g08828 Beta vulgaris HOM05D007938 ORTHO05D009929 5.5e-38 163.7 294 35.7
Ah.14g080050 Amaranthus hybridus HOM05D009341 ORTHO05D011542 2.8e-34 151.4 466 29.6
Ah.05g174520 Amaranthus hybridus HOM05D009341 ORTHO05D011542 1.1e-33 149.4 302 32.5
EL10As1g23097 Beta vulgaris HOM05D007938 ORTHO05D009929 2.4e-33 148.3 280 35.0
AUR62034866 Chenopodium quinoa HOM05D009341 ORTHO05D011542 4.2e-30 137.5 642 22.1
Ah.13g069520 Amaranthus hybridus HOM05D017142 ORTHO05D018258 4.0e-28 131.0 225 39.1
Ah.14g085440 Amaranthus hybridus HOM05D000107 ORTHO05D000062 4.0e-28 131.0 539 25.0
EL10Ac1g01545 Beta vulgaris HOM05D007938 ORTHO05D009929 7.5e-27 126.7 286 30.8
EL10Ac5g12111 Beta vulgaris HOM05D007938 ORTHO05D009929 1.3e-26 125.9 240 36.2
EL10Ac4g09062 Beta vulgaris HOM05D007938 ORTHO05D009929 2.8e-26 124.8 452 28.5
Ah.03g144690 Amaranthus hybridus HOM05D017142 ORTHO05D018258 6.3e-26 123.6 222 35.1
EL10Ac8g19867 Beta vulgaris HOM05D007938 ORTHO05D009929 1.0e-23 116.3 456 26.1
Ah.13g065690 Amaranthus hybridus HOM05D009341 ORTHO05D011542 1.3e-23 115.9 305 32.1
Medtr2g092960 Medicago truncatula HOM05D007793 ORTHO05D010104 2.9e-23 114.8 652 24.5
EL10As22g24230 Beta vulgaris HOM05D007938 ORTHO05D009929 2.5e-22 111.7 458 26.4
Ah.09g226620 Amaranthus hybridus HOM05D017142 ORTHO05D018258 5.5e-22 110.5 513 25.0
Lsat_1_v5_gn_0_40461 Lactuca sativa HOM05D009001 ORTHO05D011396 5.5e-22 110.5 666 23.6
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 9.4e-22 109.8 432 26.2
EL10As14g24069 Beta vulgaris HOM05D007938 ORTHO05D009929 1.6e-21 109.0 467 24.4
EL10Ac6g14520 Beta vulgaris HOM05D007938 ORTHO05D009929 2.3e-20 105.1 176 37.5
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 8.8e-20 103.2 286 29.0
EL10Ac1g02046 Beta vulgaris HOM05D007938 ORTHO05D009929 1.2e-19 102.8 400 27.2
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 1.2e-19 102.8 286 29.0
TPR.G11532 Trifolium pratense HOM05D007793 ORTHO05D010104 2.6e-19 101.7 475 23.8
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 3.4e-19 101.3 286 29.0
EL10As4g23435 Beta vulgaris HOM05D007938 ORTHO05D009929 9.8e-19 99.8 635 22.5
EL10Ac9g20951 Beta vulgaris HOM05D007938 ORTHO05D009929 2.8e-18 98.2 163 38.0
Ah.14g082520 Amaranthus hybridus HOM05D017142 ORTHO05D018258 1.1e-17 96.3 513 24.2
EL10Ac9g20787 Beta vulgaris HOM05D007938 ORTHO05D009929 1.4e-17 95.9 173 35.8
TPR.G11501 Trifolium pratense HOM05D007793 ORTHO05D010104 1.8e-17 95.5 299 27.8
EL10Ac3g06423 Beta vulgaris HOM05D007938 ORTHO05D009929 4.1e-17 94.4 173 35.8
VMungo0647G0191 Vigna mungo HOM05D007793 ORTHO05D010104 9.1e-17 93.2 413 28.6
EL10Ac5g12069 Beta vulgaris HOM05D007938 ORTHO05D009929 1.2e-16 92.8 95 48.4
EL10Ac6g14570 Beta vulgaris HOM05D007938 ORTHO05D009929 1.6e-16 92.4 482 25.3
SGA_v2.0_scaffold61G21245 Striga asiatica HOM05D000036 ORTHO05D010104 1.6e-16 92.4 657 23.6
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 3.5e-16 91.3 292 28.1
Hma1.2p1_0096F.1_g047665 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 4.5e-16 90.9 247 28.3
Hma1.2p1_0409F.1_g146975 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 4.5e-16 90.9 247 28.3
Medtr2g037270 Medicago truncatula HOM05D007793 ORTHO05D010104 5.9e-16 90.5 666 22.5
Os05g0359000 Oryza sativa ssp. japonica HOM05D013194 ORTHO05D015061 5.9e-16 90.5 431 24.8
Medtr8g017000 Medicago truncatula HOM05D007793 ORTHO05D010104 1.0e-15 89.7 666 22.5
ECA236G1401 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.3e-15 89.4 502 27.5
Os07g0267400 Oryza sativa ssp. japonica HOM05D025611 ORTHO05D020922 1.3e-15 89.4 430 22.6
EL10Ac8g19250 Beta vulgaris HOM05D007938 ORTHO05D009929 2.9e-15 88.2 212 31.6
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 3.8e-15 87.8 291 26.8
FvH4_3g23522 Fragaria vesca HOM05D000539 ORTHO05D000233 5.0e-15 87.4 293 26.6
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 6.5e-15 87.0 252 27.0
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.6e-15 86.7 285 28.4
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 8.6e-15 86.7 272 28.7
FvH4_4g15803 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-14 86.3 252 27.0
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-14 86.3 285 28.4
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-14 86.3 285 28.4
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-14 86.3 285 28.4
RcHm_v2.0_Chr4g0417051 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-14 86.3 656 22.9
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 1.5e-14 85.9 661 20.4
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.5e-14 85.1 285 28.4
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.5e-14 85.1 285 28.4
Hma1.2p1_0473F.1_g160240 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 2.5e-14 85.1 244 27.5
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 2.5e-14 85.1 291 26.5
Ah.13g067260 Amaranthus hybridus HOM05D009341 ORTHO05D011542 3.3e-14 84.7 118 37.3
Medtr3g011560 Medicago truncatula HOM05D007793 ORTHO05D010104 3.3e-14 84.7 667 22.0
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 4.2e-14 84.3 279 26.5
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 7.2e-14 83.6 290 25.2
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 9.5e-14 83.2 284 27.1
CANSAT54G2622 Cannabis sativa HOM05D000539 ORTHO05D000233 9.5e-14 83.2 294 26.9
EL10As4g23377 Beta vulgaris HOM05D007938 ORTHO05D009929 1.2e-13 82.8 180 32.8
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 2.1e-13 82.0 283 26.1
EL10Ac1g01968 Beta vulgaris HOM05D007938 ORTHO05D009929 4.7e-13 80.9 95 45.3
FvH4_3g19213 Fragaria vesca HOM05D000539 ORTHO05D000233 6.1e-13 80.5 252 25.8
Zm00001eb020190 Zea mays HOM05D013194 ORTHO05D015061 6.1e-13 80.5 345 24.6
EL10Ac7g17601 Beta vulgaris HOM05D007938 ORTHO05D009929 8.0e-13 80.1 250 28.4
CANSAT56G2121 Cannabis sativa HOM05D000539 ORTHO05D000233 8.0e-13 80.1 253 27.3
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 8.0e-13 80.1 658 21.4
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 1.0e-12 79.7 290 25.9
AUR62042300 Chenopodium quinoa HOM05D007123 ORTHO05D000233 1.4e-12 79.3 260 27.7
CANSAT01G2339 Cannabis sativa HOM05D000539 ORTHO05D000233 1.8e-12 79.0 289 26.0
CANSAT56G2878 Cannabis sativa HOM05D000539 ORTHO05D000233 1.8e-12 79.0 277 26.0
CANSAT80G0158 Cannabis sativa HOM05D000539 ORTHO05D000233 1.8e-12 79.0 285 26.3
EL10Ac2g03155 Beta vulgaris HOM05D007938 ORTHO05D009929 3.0e-12 78.2 178 32.0
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 4.0e-12 77.8 664 22.3
EL10Ac7g17206 Beta vulgaris HOM05D000134 ORTHO05D000168 6.8e-12 77.0 136 36.0
FvH4_4g10052 Fragaria vesca HOM05D000539 ORTHO05D000233 8.9e-12 76.6 294 25.5
VMungo1215G0329 Vigna mungo HOM05D007793 ORTHO05D010104 8.9e-12 76.6 391 24.3
FvH4_6g23351 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-11 76.3 296 24.3
EL10As2g23214 Beta vulgaris HOM05D007938 ORTHO05D009929 1.5e-11 75.9 268 27.6
EL10Ac6g14294 Beta vulgaris HOM05D007938 ORTHO05D009929 2.0e-11 75.5 188 30.3
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 2.0e-11 75.5 295 23.7
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 2.0e-11 75.5 246 26.8
FAN07G0889 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.6e-11 75.1 252 28.6
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 3.4e-11 74.7 296 24.3
EL10Ac4g08614 Beta vulgaris HOM05D007938 ORTHO05D009929 4.4e-11 74.3 243 25.5
ECA248G3320 Erigeron canadensis HOM05D035679 ORTHO05D011396 4.4e-11 74.3 161 29.8
Ah.15g097980 Amaranthus hybridus HOM05D007938 ORTHO05D009929 7.5e-11 73.6 385 23.4
EL10Ac6g14126 Beta vulgaris HOM05D007938 ORTHO05D009929 7.5e-11 73.6 296 24.7
CANSAT54G0698 Cannabis sativa HOM05D000539 ORTHO05D000233 7.5e-11 73.6 302 26.2
AUR62040393 Chenopodium quinoa HOM05D007123 ORTHO05D000233 7.5e-11 73.6 264 25.8
EL10Ac4g08827 Beta vulgaris HOM05D007938 ORTHO05D009929 9.8e-11 73.2 298 27.5
EL10Ac8g19845 Beta vulgaris HOM05D007938 ORTHO05D009929 1.3e-10 72.8 257 24.9
EL10Ac3g06318 Beta vulgaris HOM05D007938 ORTHO05D009929 1.7e-10 72.4 188 31.4
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.2e-10 72.0 329 25.2
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.2e-10 72.0 329 25.2
Sed0011713 Sechium edule HOM05D000539 ORTHO05D000233 2.8e-10 71.6 278 28.1
FvH4_6g12431 Fragaria vesca HOM05D000539 ORTHO05D000233 4.9e-10 70.9 252 25.0
AUR62022811 Chenopodium quinoa HOM05D007123 ORTHO05D000233 8.3e-10 70.1 281 26.3
FvH4_3g31713 Fragaria vesca HOM05D000539 ORTHO05D000233 8.3e-10 70.1 296 23.6
CANSAT54G1138 Cannabis sativa HOM05D000539 ORTHO05D000233 1.4e-09 69.3 253 25.7
FAN15G1280 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-09 69.3 252 25.0
RcHm_v2.0_Chr7g0228371 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-09 69.3 214 29.0
Ah.06g190780 Amaranthus hybridus HOM05D017142 ORTHO05D018258 1.8e-09 68.9 129 31.8
CANSAT54G2529 Cannabis sativa HOM05D009806 ORTHO05D000233 2.4e-09 68.6 287 25.4
CANSAT35G1647 Cannabis sativa HOM05D000539 ORTHO05D000233 3.1e-09 68.2 288 25.3
VMungo0464G1009 Vigna mungo HOM05D007793 ORTHO05D010104 3.1e-09 68.2 300 26.3
EL10As4g23378 Beta vulgaris HOM05D007938 ORTHO05D009929 4.1e-09 67.8 139 30.9
RcHm_v2.0_Chr2g0145261 Rosa chinensis HOM05D000539 ORTHO05D000233 9.2e-09 66.6 627 21.7
CANSAT64G2228 Cannabis sativa HOM05D009806 ORTHO05D013821 1.2e-08 66.2 288 25.7
RcHm_v2.0_Chr5g0066151 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-08 65.9 260 27.7
Atru.chr6.156 Acer truncatum HOM05D000616 ORTHO05D000233 2.0e-08 65.5 250 26.0
Lj2g0011920 Lotus japonicus HOM05D002644 ORTHO05D003267 2.0e-08 65.5 664 21.2
EL10Ac8g19632 Beta vulgaris HOM05D007938 ORTHO05D009929 4.5e-08 64.3 389 22.9
EL10Ac9g20935 Beta vulgaris HOM05D007938 ORTHO05D009929 4.5e-08 64.3 264 24.2
AUR62038589 Chenopodium quinoa HOM05D000107 ORTHO05D000233 4.5e-08 64.3 398 23.1
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 7.8e-08 63.5 302 24.8
AUR62026896 Chenopodium quinoa HOM05D007123 ORTHO05D000233 1.3e-07 62.8 266 25.6
TPR.G687 Trifolium pratense HOM05D007793 ORTHO05D010104 1.3e-07 62.8 226 25.7
Sed0022033 Sechium edule HOM05D000539 ORTHO05D000233 2.3e-07 62.0 160 29.4
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.6e-07 60.5 258 24.4
FvH4_2g04948 Fragaria vesca HOM05D000539 ORTHO05D000233 8.6e-07 60.1 250 24.8
AUR62037084 Chenopodium quinoa HOM05D007123 ORTHO05D000233 1.5e-06 59.3 282 25.5
Prupe.1G130900 Prunus persica HOM05D000539 ORTHO05D000233 1.5e-06 59.3 170 27.6
RcHm_v2.0_Chr1g0340611 Rosa chinensis HOM05D000539 ORTHO05D000233 1.5e-06 59.3 180 28.9
VMungo0647G1694 Vigna mungo HOM05D007793 ORTHO05D010104 1.5e-06 59.3 130 31.5
EL10As1g23060 Beta vulgaris HOM05D007938 ORTHO05D009929 2.5e-06 58.5 138 33.3
FvH4_3g31624 Fragaria vesca HOM05D000539 ORTHO05D000592 2.5e-06 58.5 282 24.8
FAN26G3042 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.5e-06 58.5 181 28.2
Ah.01g016630 Amaranthus hybridus HOM05D007938 ORTHO05D009929 3.3e-06 58.2 131 29.0
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.3e-06 58.2 223 28.3
ECA247G4030 Erigeron canadensis HOM05D009001 ORTHO05D011396 4.3e-06 57.8 285 27.4
Ah.15g097810 Amaranthus hybridus HOM05D009341 ORTHO05D011542 5.6e-06 57.4 71 39.4
CANSAT54G1566 Cannabis sativa HOM05D000539 ORTHO05D000233 7.3e-06 57.0 175 26.9
FvH4_4g05701 Fragaria vesca HOM05D000539 ORTHO05D000233 7.3e-06 57.0 182 27.5
Ah.07g196420 Amaranthus hybridus HOM05D017142 ORTHO05D018258 9.5e-06 56.6 159 27.7


User provided reference genes

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