Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 2.4e-190 668.7 347 100.0
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 2.3e-180 635.6 344 95.1
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 8.5e-143 510.8 348 76.1
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 8.5e-119 431.0 285 77.2
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 1.3e-106 390.6 349 63.0
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 6.3e-106 388.3 356 58.7
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 6.3e-106 388.3 354 59.9
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 2.4e-105 386.3 356 59.0
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 2.4e-105 386.3 349 57.9
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 1.6e-104 383.6 345 59.7
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 2.0e-104 383.3 348 60.9
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 2.7e-104 382.9 349 60.5
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 2.7e-104 382.9 344 59.9
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 3.5e-104 382.5 347 59.4
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 4.5e-104 382.1 347 59.4
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 4.5e-104 382.1 347 59.4
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 7.7e-104 381.3 347 59.9
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 6.6e-103 378.3 354 60.7
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 9.5e-102 374.4 354 60.2
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 1.2e-101 374.0 337 59.3
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 2.8e-101 372.9 340 59.4
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 2.8e-101 372.9 326 59.5
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 4.7e-101 372.1 346 57.8
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 6.1e-101 371.7 346 58.1
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 1.0e-100 370.9 345 58.6
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 2.3e-100 369.8 344 58.7
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.3e-100 369.8 339 58.1
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 3.0e-100 369.4 323 61.3
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 5.2e-100 368.6 352 57.7
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 6.8e-100 368.2 322 58.4
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 6.8e-100 368.2 322 58.4
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 6.8e-100 368.2 354 57.3
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 8.9e-100 367.9 345 58.3
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 1.5e-99 367.1 347 57.1
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 2.6e-99 366.3 336 58.3
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 3.4e-99 365.9 345 58.0
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 3.4e-99 365.9 285 66.0
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 3.4e-99 365.9 344 57.6
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 4.4e-99 365.5 345 58.0
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 1.3e-98 364.0 345 57.7
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 3.2e-97 359.4 345 57.1
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 9.2e-97 357.8 344 57.8
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 9.2e-97 357.8 342 56.4
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.2e-96 357.5 297 61.6
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 3.5e-96 355.9 333 58.3
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 1.0e-95 354.4 335 57.9
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.5e-94 350.5 324 59.3
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 3.3e-94 349.4 347 56.2
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 4.3e-94 349.0 348 55.2
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 4.3e-94 349.0 350 56.6
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 1.6e-93 347.1 352 54.3
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 2.1e-93 346.7 346 56.1
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 2.8e-93 346.3 363 53.2
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 1.0e-92 344.4 348 55.7
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 1.4e-92 344.0 344 55.5
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.3e-92 343.2 352 55.4
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 4.0e-92 342.4 349 55.0
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 1.5e-91 340.5 345 53.9
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 4.4e-91 339.0 342 55.0
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 7.5e-91 338.2 365 51.8
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 2.2e-90 336.7 344 54.1
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 6.4e-90 335.1 273 64.1
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 2.4e-89 333.2 347 53.6
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 1.2e-88 330.9 350 52.6
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 1.2e-88 330.9 346 52.3
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 3.5e-88 329.3 278 60.4
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 1.7e-87 327.0 343 54.2
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 1.1e-84 317.8 275 57.5
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 6.8e-84 315.1 346 52.3
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 4.4e-83 312.4 324 55.6
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 5.8e-83 312.0 346 52.0
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 9.8e-83 311.2 349 51.6
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 9.8e-83 311.2 347 53.6
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 1.4e-81 307.4 329 53.2
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 1.4e-81 307.4 295 57.6
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 1.4e-81 307.4 295 57.6
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 3.2e-81 306.2 350 52.3
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 3.2e-81 306.2 312 53.5
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 5.4e-81 305.4 349 52.7
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 9.2e-81 304.7 275 60.0
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 2.1e-80 303.5 344 51.2
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 4.6e-80 302.4 350 50.6
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 6.6e-79 298.5 312 54.2
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 2.5e-78 296.6 340 51.8
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 1.2e-75 287.7 317 48.6
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 5.8e-75 285.4 350 48.0
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 3.6e-69 266.2 314 46.2
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 6.8e-68 261.9 298 50.0
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 1.9e-62 243.8 206 59.7
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 3.3e-62 243.0 355 42.0
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 1.1e-60 238.0 312 46.5
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 1.4e-57 227.6 185 60.5
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 6.9e-52 208.8 232 48.7
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 6.4e-50 202.2 134 73.1
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 3.4e-43 179.9 273 37.4
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 1.1e-41 174.9 123 67.5
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 2.8e-29 133.7 282 31.9
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 1.1e-28 131.7 260 39.6
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 5.0e-26 122.9 273 32.6
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 1.1e-25 121.7 223 39.9
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 4.6e-24 116.3 132 45.5
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 9.7e-22 108.6 114 53.5
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 1.5e-19 101.3 114 50.0
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 3.8e-18 96.7 259 27.4
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 5.9e-11 72.8 90 41.1
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 1.6e-08 64.7 156 29.5


User provided reference genes

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