Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 2.7e-129 465.3 231 100.0
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 3.9e-104 381.7 254 78.3
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 6.8e-72 274.6 262 61.1
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 9.5e-66 254.2 321 49.8
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 5.4e-45 185.3 253 46.6
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 1.2e-44 184.1 230 46.5
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 1.6e-44 183.7 232 48.3
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 2.7e-44 183.0 262 44.3
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 3.5e-44 182.6 218 50.0
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.7e-43 180.3 260 46.5
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 5.1e-43 178.7 258 48.8
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 5.1e-43 178.7 230 46.5
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 1.9e-42 176.8 190 54.7
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 1.9e-42 176.8 208 48.1
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 3.3e-42 176.0 215 50.2
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 5.6e-42 175.3 234 45.7
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 9.6e-42 174.5 241 46.1
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 1.6e-41 173.7 230 45.2
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.6e-41 173.7 220 49.5
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 2.8e-41 172.9 232 47.4
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 3.6e-41 172.6 256 45.3
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 6.2e-41 171.8 181 55.8
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 6.2e-41 171.8 256 44.9
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 1.1e-40 171.0 233 45.9
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 1.4e-40 170.6 160 56.2
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 1.8e-40 170.2 189 52.4
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 1.8e-40 170.2 189 51.9
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 2.4e-40 169.9 234 45.3
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 3.1e-40 169.5 220 47.3
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.1e-40 169.5 231 43.7
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 4.0e-40 169.1 264 41.7
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 4.0e-40 169.1 174 52.9
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 5.3e-40 168.7 255 42.7
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 9.0e-40 167.9 261 44.4
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 1.2e-39 167.5 183 54.1
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 1.2e-39 167.5 267 41.6
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 1.5e-39 167.2 238 45.0
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 2.0e-39 166.8 181 49.7
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 2.6e-39 166.4 216 47.7
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 4.4e-39 165.6 184 52.2
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 4.4e-39 165.6 187 51.9
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 4.4e-39 165.6 254 46.5
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 5.8e-39 165.2 191 50.8
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 9.9e-39 164.5 149 55.0
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 1.3e-38 164.1 181 50.8
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 1.3e-38 164.1 261 44.4
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 1.7e-38 163.7 238 47.1
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 2.9e-38 162.9 229 42.8
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 2.9e-38 162.9 201 49.3
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 1.1e-37 161.0 234 44.4
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 1.1e-37 161.0 263 42.6
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 1.1e-37 161.0 229 44.1
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 1.1e-37 161.0 268 41.0
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 1.4e-37 160.6 234 43.6
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 3.2e-37 159.5 235 44.7
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 3.2e-37 159.5 177 49.2
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 5.4e-37 158.7 265 42.3
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 9.3e-37 157.9 226 40.7
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 9.3e-37 157.9 220 44.5
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 1.2e-36 157.5 224 44.6
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 2.1e-36 156.8 214 43.9
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 2.1e-36 156.8 193 47.2
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 2.1e-36 156.8 214 43.9
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 2.1e-36 156.8 193 47.2
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 2.7e-36 156.4 204 49.5
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 4.6e-36 155.6 219 43.4
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 7.8e-36 154.8 214 43.5
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 1.0e-35 154.5 224 45.1
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 1.3e-35 154.1 193 46.6
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 1.7e-35 153.7 148 54.7
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 2.3e-35 153.3 260 40.0
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 3.9e-35 152.5 175 51.4
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 5.1e-35 152.1 220 45.5
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 6.6e-35 151.8 182 51.1
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 8.7e-35 151.4 217 42.9
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 8.7e-35 151.4 215 42.8
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.1e-34 151.0 201 43.8
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 7.3e-34 148.3 228 41.7
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 9.6e-34 147.9 215 44.7
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 9.6e-34 147.9 215 44.7
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 1.3e-33 147.5 256 40.6
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.6e-33 147.1 194 47.9
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.6e-33 147.1 261 38.7
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 2.8e-33 146.4 232 40.9
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 4.8e-33 145.6 147 51.7
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.8e-32 143.7 237 41.8
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 5.3e-32 142.1 150 52.7
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 5.3e-32 142.1 260 40.0
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 1.2e-31 141.0 235 42.6
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 2.0e-31 140.2 143 49.0
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 2.2e-30 136.7 191 45.0
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 6.4e-30 135.2 181 45.9
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 2.1e-28 130.2 126 51.6
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 2.7e-28 129.8 151 47.0
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 4.6e-28 129.0 164 46.3
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 7.9e-28 128.3 180 44.4
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 1.8e-24 117.1 209 37.3
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 3.1e-24 116.3 141 44.7
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 3.4e-23 112.8 88 56.8
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 9.9e-23 111.3 324 31.5
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 1.4e-21 107.5 94 56.4
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 9.3e-21 104.8 90 56.7
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 3.5e-20 102.8 192 34.4
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 1.1e-18 97.8 84 58.3
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 2.0e-15 87.0 182 36.3
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 2.9e-14 83.2 152 42.1
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 2.5e-13 80.1 152 36.8
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 2.5e-13 80.1 81 54.3
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 7.1e-13 78.6 180 36.7
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 3.5e-12 76.3 184 33.2
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 9.0e-08 61.6 65 50.8
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 1.3e-06 57.8 86 38.4


User provided reference genes

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