Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 1.3e-247 859.4 478 100.0
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 6.1e-216 754.2 495 86.7
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 8.7e-130 468.0 511 59.7
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 2.0e-94 350.5 601 40.9
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 1.6e-46 191.4 487 34.7
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 7.8e-46 189.1 454 35.7
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 1.5e-41 174.9 261 44.8
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 9.2e-39 165.6 249 44.2
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 6.0e-38 162.9 482 33.4
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 1.0e-37 162.2 468 32.7
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 1.3e-37 161.8 244 43.0
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 1.7e-37 161.4 256 43.0
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 3.9e-37 160.2 452 33.0
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 7.3e-36 156.0 457 33.5
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.2e-35 155.2 352 36.6
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 2.1e-35 154.5 458 31.4
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 3.6e-35 153.7 371 35.8
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 3.6e-35 153.7 490 30.4
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 4.7e-35 153.3 465 31.4
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 2.3e-34 151.0 450 32.0
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 2.3e-34 151.0 465 31.0
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 4.0e-34 150.2 452 32.7
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 6.8e-34 149.4 452 32.3
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.5e-33 148.3 360 35.8
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 1.5e-33 148.3 273 39.6
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 2.6e-33 147.5 351 35.0
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 5.8e-33 146.4 449 31.8
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 1.7e-32 144.8 242 43.4
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.2e-32 144.4 361 34.3
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.4e-31 141.7 263 37.3
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 1.9e-31 141.4 247 38.5
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 2.4e-31 141.0 443 31.6
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 7.1e-31 139.4 438 30.1
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 7.1e-31 139.4 285 36.5
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 1.2e-30 138.7 256 39.5
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.2e-30 138.7 270 34.1
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.6e-30 136.7 361 33.8
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.0e-29 135.6 274 36.9
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 2.3e-29 134.4 251 36.3
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 5.6e-28 129.8 471 28.9
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 2.1e-27 127.9 466 29.6
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 8.1e-27 125.9 251 40.2
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 1.8e-26 124.8 300 31.3
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 6.8e-26 122.9 492 29.1
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 4.4e-25 120.2 446 30.9
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 2.9e-24 117.5 309 36.2
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 3.8e-24 117.1 250 37.6
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 4.9e-24 116.7 442 29.9
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 6.4e-24 116.3 464 31.2
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 5.4e-23 113.2 290 31.4
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.6e-22 111.7 389 29.8
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 3.5e-22 110.5 305 31.1
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 3.0e-21 107.5 228 35.1
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 3.0e-21 107.5 385 29.9
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 3.9e-21 107.1 228 33.8
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 1.2e-19 102.1 229 33.2
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 8.1e-19 99.4 554 25.5
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 1.1e-18 99.0 234 35.5
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 4.0e-18 97.1 248 32.7
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 6.9e-18 96.3 303 29.0
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 8.9e-18 95.9 94 53.2
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 1.2e-17 95.5 253 34.8
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 2.0e-17 94.7 228 35.1
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 4.4e-17 93.6 247 33.2
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 3.2e-15 87.4 429 26.8
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 4.2e-15 87.0 356 28.9
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 1.3e-13 82.0 441 28.1
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 1.7e-13 81.6 208 35.1
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 6.6e-13 79.7 468 25.6
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 3.3e-12 77.4 205 32.2
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 7.3e-12 76.3 94 43.6
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 6.2e-11 73.2 407 29.0
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 1.2e-09 68.9 220 33.2
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 3.4e-09 67.4 54 55.6
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 2.9e-08 64.3 399 26.8
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 2.1e-06 58.2 155 29.7
SMO137G0065 Selaginella moellendorffii HOM05D020562 ORTHO05D030110 2.7e-06 57.8 79 35.4


User provided reference genes

Program Settings