Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015536 Chenopodium quinoa HOM05D006656 ORTHO05D008208 8.0e-103 377.1 190 100.0
AUR62002173 Chenopodium quinoa HOM05D006656 ORTHO05D008208 1.3e-73 280.0 178 83.1
Ah.13g072350 Amaranthus hybridus HOM05D006656 ORTHO05D008208 2.1e-71 272.7 190 75.3
EL10Ac3g04969 Beta vulgaris HOM05D006656 ORTHO05D008208 4.4e-69 265.0 188 73.4
arahy.Tifrunner.gnm1.ann1.CLZM2Q Arachis hypogaea HOM05D006656 ORTHO05D008208 4.3e-64 248.4 178 71.9
ClCG05G004140 Citrullus lanatus HOM05D006656 ORTHO05D008208 5.6e-64 248.1 178 70.8
Eucgr.H02989 Eucalyptus grandis HOM05D006656 ORTHO05D008208 2.1e-63 246.1 186 69.4
CsaV3_3G011860 Cucumis sativus L. HOM05D006656 ORTHO05D008208 4.7e-63 245.0 178 71.3
Hund11920 Selenicereus undatus HOM05D006656 ORTHO05D008208 8.1e-63 244.2 179 69.8
Actinidia39917 Actinidia chinensis HOM05D006656 ORTHO05D008208 1.1e-62 243.8 175 70.3
Ciclev10006077m.g Citrus clementina HOM05D006656 ORTHO05D008208 1.1e-62 243.8 178 70.8
Potri.010G068200 Populus trichocarpa HOM05D006656 ORTHO05D008208 1.1e-62 243.8 180 68.9
Sed0021014 Sechium edule HOM05D006656 ORTHO05D008208 1.1e-62 243.8 178 70.8
Gohir.A09G228200 Gossypium hirsutum HOM05D006656 ORTHO05D008208 2.0e-61 239.6 185 68.1
Gohir.D09G229300 Gossypium hirsutum HOM05D006656 ORTHO05D008208 3.4e-61 238.8 187 67.4
Gorai.006G252000 Gossypium raimondii HOM05D006656 ORTHO05D008208 3.4e-61 238.8 187 67.4
Ca_12138_v3 Cicer arietinum L. HOM05D006656 ORTHO05D008208 5.8e-61 238.0 180 67.2
QL06p020043 Quercus lobata HOM05D006656 ORTHO05D008208 5.8e-61 238.0 180 67.8
Nn1g02903 Nelumbo nucifera HOM05D006656 ORTHO05D008208 7.6e-61 237.7 188 67.6
Hma1.2p1_0112F.1_g054500 Hydrangea macrophylla HOM05D006656 ORTHO05D008208 1.3e-60 236.9 184 67.4
Manes.13G093430 Manihot esculenta HOM05D006656 ORTHO05D008208 1.3e-60 236.9 181 66.9
PGR004G1080 Punica granatum HOM05D006656 ORTHO05D008208 1.3e-60 236.9 177 70.1
Cpa.g.sc44.21 Carica papaya HOM05D006656 ORTHO05D008208 2.2e-60 236.1 178 68.5
CSS0031602 Camellia sinensis var. sinensis HOM05D006656 ORTHO05D008208 2.9e-60 235.7 188 64.4
Dinv27090 Davidia involucrata HOM05D006656 ORTHO05D008208 2.9e-60 235.7 182 68.1
Lalb_Chr03g0037311 Lupinus albus HOM05D006656 ORTHO05D008208 3.8e-60 235.3 179 67.6
Phvul.007G275000 Phaseolus vulgaris HOM05D006656 ORTHO05D008208 3.8e-60 235.3 180 67.2
MD13G1218700 Malus domestica HOM05D006656 ORTHO05D008208 6.4e-60 234.6 180 67.2
Dinv29827 Davidia involucrata HOM05D006656 ORTHO05D008208 8.4e-60 234.2 180 67.2
HanXRQChr04g0115371 Helianthus annuus HOM05D006656 ORTHO05D008208 8.4e-60 234.2 177 67.8
COL.COLO4_15934 Corchorus olitorius HOM05D006656 ORTHO05D008208 1.1e-59 233.8 177 66.7
DCAR_030758 Daucus carota HOM05D000730 ORTHO05D008208 1.1e-59 233.8 173 67.1
Medtr1g041795 Medicago truncatula HOM05D006656 ORTHO05D008208 1.4e-59 233.4 180 65.6
RcHm_v2.0_Chr4g0394701 Rosa chinensis HOM05D006656 ORTHO05D008208 1.4e-59 233.4 178 68.0
HanXRQChr01g0022881 Helianthus annuus HOM05D006656 ORTHO05D008208 1.9e-59 233.0 177 67.8
MSTRG.4156 Avicennia marina HOM05D006656 ORTHO05D008208 2.4e-59 232.6 176 67.0
FvH4_4g04220 Fragaria vesca HOM05D006656 ORTHO05D008208 2.4e-59 232.6 178 68.0
Glyma.10G005200 Glycine max HOM05D006656 ORTHO05D008208 2.4e-59 232.6 179 66.5
CANSAT78G1635 Cannabis sativa HOM05D006656 ORTHO05D008208 4.2e-59 231.9 183 66.7
CiPaw.01G180600 Carya illinoinensis HOM05D006656 ORTHO05D008208 4.2e-59 231.9 181 66.3
Thecc.04G260300 Theobroma cacao HOM05D006656 ORTHO05D008208 5.4e-59 231.5 188 64.4
Nitab4.5_0013448g0010 Nicotiana tabacum HOM05D006656 ORTHO05D008208 7.1e-59 231.1 178 66.9
Aqoxy2G03715 Aquilegia oxysepala HOM05D006656 ORTHO05D008208 9.3e-59 230.7 177 66.1
Os10g0471300 Oryza sativa ssp. japonica HOM05D006656 ORTHO05D008208 9.3e-59 230.7 177 67.2
Sc25g0003620 Simmondsia chinensis HOM05D006656 ORTHO05D008208 9.3e-59 230.7 180 67.8
Lj6g0027143 Lotus japonicus HOM05D006656 ORTHO05D008208 1.2e-58 230.3 180 65.0
PSO210G7176 Papaver somniferum HOM05D006656 ORTHO05D008208 1.2e-58 230.3 177 68.4
Lsat_1_v5_gn_1_75161 Lactuca sativa HOM05D006656 ORTHO05D008208 2.1e-58 229.6 180 64.4
Nitab4.5_0001425g0100 Nicotiana tabacum HOM05D006656 ORTHO05D008208 2.7e-58 229.2 186 64.5
PSO447G0273 Papaver somniferum HOM05D006656 ORTHO05D008208 2.7e-58 229.2 177 68.4
Solyc09g090430.3 Solanum lycopersicum HOM05D006656 ORTHO05D008208 3.5e-58 228.8 178 65.2
Sopen09g033350 Solanum pennellii HOM05D006656 ORTHO05D008208 3.5e-58 228.8 178 65.2
FAN12G3008 Fragaria x ananassa HOM05D006656 ORTHO05D008208 6.0e-58 228.0 178 66.3
TPR.G25151 Trifolium pratense HOM05D006656 ORTHO05D008208 6.0e-58 228.0 180 64.4
Migut.G00494 Erythranthe guttata HOM05D006656 ORTHO05D008208 1.0e-57 227.3 174 67.8
SalBow3G1837 Salvia bowleyana HOM05D006656 ORTHO05D008208 1.0e-57 227.3 179 65.4
PGSC0003DMG400017160 Solanum tuberosum HOM05D006656 ORTHO05D008208 1.0e-57 227.3 178 65.2
CAN.G220.47 Capsicum annuum HOM05D006656 ORTHO05D008208 1.3e-57 226.9 178 65.2
MBI07_g22362_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 1.7e-57 226.5 182 67.0
MBI14_g30459_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 1.7e-57 226.5 182 66.5
arahy.Tifrunner.gnm1.ann1.DD5QG4 Arachis hypogaea HOM05D006656 ORTHO05D008208 2.3e-57 226.1 171 67.8
HPP92_001387 Vanilla planifolia HOM05D006656 ORTHO05D008208 3.0e-57 225.7 177 68.4
Zm00001eb046120 Zea mays HOM05D006656 ORTHO05D008208 3.0e-57 225.7 187 65.2
Atru.chr4.1959 Acer truncatum HOM05D006656 ORTHO05D008208 3.9e-57 225.3 176 68.2
ECA248G3216 Erigeron canadensis HOM05D006656 ORTHO05D008208 5.1e-57 224.9 178 65.7
Peaxi162Scf00602g00515 Petunia axillaris HOM05D006656 ORTHO05D008208 5.1e-57 224.9 180 64.4
Sabra10G0038900 Salix brachista HOM05D006656 ORTHO05D008208 5.1e-57 224.9 170 68.2
TWI09G0269 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 5.1e-57 224.9 178 65.2
TWI09G1522 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 5.1e-57 224.9 178 65.2
Prupe.1G045500 Prunus persica HOM05D006656 ORTHO05D008208 2.5e-56 222.6 177 65.0
arahy.Tifrunner.gnm1.ann1.C3VAXP Arachis hypogaea HOM05D006656 ORTHO05D008208 4.3e-56 221.9 172 66.3
THA.LOC104804764 Tarenaya hassleriana HOM05D006656 ORTHO05D008208 5.6e-56 221.5 178 64.6
CDE02G2281 Ceratophyllum demersum HOM05D006656 ORTHO05D008208 9.6e-56 220.7 179 64.8
Rhsim02G0042500 Rhododendron simsii HOM05D006656 ORTHO05D008208 2.1e-55 219.5 179 63.7
BcaB06g26499 Brassica carinata HOM05D006656 ORTHO05D008208 4.8e-55 218.4 178 63.5
VMungo0720G2665 Vigna mungo HOM05D006656 ORTHO05D008208 4.8e-55 218.4 172 65.7
FAN17G2925 Fragaria x ananassa HOM05D006656 ORTHO05D008208 6.2e-55 218.0 171 66.7
Lj3A676G52 Lonicera japonica HOM05D006656 ORTHO05D008208 1.4e-54 216.9 179 64.8
Sp3g21170 Schrenkiella parvula HOM05D006656 ORTHO05D008208 1.4e-54 216.9 178 63.5
SpUn0047_0050 Schrenkiella parvula HOM05D006656 ORTHO05D008208 1.4e-54 216.9 178 63.5
AT3G23490 Arabidopsis thaliana HOM05D006656 ORTHO05D008208 1.8e-54 216.5 178 63.5
AL3G38180 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 2.4e-54 216.1 178 63.5
Thhalv10021585m.g Eutrema salsugineum HOM05D006656 ORTHO05D008208 3.1e-54 215.7 178 62.4
Psat6g137160 Pisum sativum HOM05D006656 ORTHO05D008208 3.1e-54 215.7 172 63.4
BraA07t28683Z Brassica rapa HOM05D006656 ORTHO05D008208 4.0e-54 215.3 178 62.4
BcaC06g35534 Brassica carinata HOM05D006656 ORTHO05D008208 5.3e-54 214.9 178 62.4
A07p08920 Brassica napus HOM05D006656 ORTHO05D008208 5.3e-54 214.9 178 61.8
C07p13760 Brassica napus HOM05D006656 ORTHO05D008208 5.3e-54 214.9 178 62.4
BolC7t41871H Brassica oleracea HOM05D006656 ORTHO05D008208 5.3e-54 214.9 178 62.4
Carub.0003s2372 Capsella rubella HOM05D006656 ORTHO05D008208 1.2e-53 213.8 178 62.4
SGA_v2.0_scaffold67G22735 Striga asiatica HOM05D006656 ORTHO05D008208 5.8e-53 211.5 220 55.0
vmacro15465 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 3.8e-52 208.8 177 61.6
MBI07_g15427_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 1.1e-51 207.2 182 63.2
Aa31LG8G9940 Aethionema arabicum HOM05D006656 ORTHO05D008208 3.2e-51 205.7 170 62.4
ATR0736G110 Amborella trichopoda HOM05D006656 ORTHO05D008208 1.6e-50 203.4 178 57.3
vmacro15466 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 9.6e-48 194.1 172 61.0
Pp3c19_11440 Physcomitrium patens HOM05D006656 ORTHO05D008208 9.9e-45 184.1 181 52.5
MELO3C006399.2 Cucumis melo HOM05D000603 ORTHO05D003510 5.5e-43 178.3 170 55.9
Mapoly0080s0009 Marchantia polymorpha HOM05D006656 ORTHO05D008208 8.7e-41 171.0 179 50.8
AagrBONN_evm.TU.Sc2ySwM_344.2747 Anthoceros agrestis HOM05D006656 ORTHO05D008208 6.9e-38 161.4 189 48.7
Haze_11433 Corylus avellana HOM05D006656 ORTHO05D008208 2.9e-36 156.0 254 41.3
GSVIVG01027874001 Vitis vinifera HOM05D006656 ORTHO05D008208 3.8e-36 155.6 117 67.5
Cc03_g05940 Coffea canephora HOM05D006656 ORTHO05D008208 8.4e-36 154.5 117 65.8
HPP92_000029 Vanilla planifolia HOM05D006656 ORTHO05D008208 8.4e-36 154.5 188 52.7
Cfa014756 Carpinus fangiana HOM05D006656 ORTHO05D008208 4.6e-34 148.7 130 61.5
CBR_g36666 Chara braunii HOM05D006656 ORTHO05D008208 6.0e-34 148.3 180 44.4
Duzib151G0018 Durio zibethinus HOM05D006656 ORTHO05D008208 6.7e-33 144.8 148 53.4
AL242U10020 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 1.5e-32 143.7 134 59.0
CBR_g71972 Chara braunii HOM05D006656 ORTHO05D008208 1.5e-32 143.7 174 46.6
PRCOL_00005673 Prasinoderma coloniale HOM05D006656 ORTHO05D008208 3.4e-29 132.5 170 41.2
arahy.Tifrunner.gnm1.ann1.USJ12Z Arachis hypogaea HOM05D006656 ORTHO05D008208 9.3e-27 124.4 80 77.5
SMO271G0046 Selaginella moellendorffii HOM05D006656 ORTHO05D008208 1.1e-22 110.9 163 38.7
Gohir.A02G041301 Gossypium hirsutum HOM05D006656 ORTHO05D008208 5.5e-19 98.6 63 74.6
Nitab4.5_0000014g0170 Nicotiana tabacum HOM05D006656 ORTHO05D008208 1.2e-18 97.4 74 64.9
AagrBONN_evm.TU.Sc2ySwM_344.2745 Anthoceros agrestis HOM05D006656 ORTHO05D008208 1.0e-09 67.8 108 38.9
BcaB02g10054 Brassica carinata HOM05D006656 ORTHO05D008208 3.0e-09 66.2 90 44.4
HPP92_027915 Vanilla planifolia HOM05D003501 ORTHO05D004388 2.6e-08 63.2 50 68.0
MCO04G243 Micromonas commoda HOM05D006656 ORTHO05D008208 4.4e-08 62.4 173 28.3
BcaB06g27105 Brassica carinata HOM05D006656 ORTHO05D008208 7.4e-08 61.6 75 45.3
BolC2t11169H Brassica oleracea HOM05D006656 ORTHO05D008208 3.7e-07 59.3 81 43.2
BcaC09g51699 Brassica carinata HOM05D006656 ORTHO05D008208 1.1e-06 57.8 71 45.1


User provided reference genes

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