Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.2e-197 693.0 357 100.0
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 3.3e-182 641.7 357 93.8
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 1.1e-158 563.5 378 80.4
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 5.3e-156 554.7 378 78.6
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 1.4e-137 493.4 458 61.1
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 6.7e-127 458.0 382 62.3
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 8.7e-127 457.6 382 62.0
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 6.9e-124 448.0 401 59.6
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 2.0e-123 446.4 382 61.5
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 3.4e-123 445.7 388 64.2
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 4.5e-123 445.3 380 61.8
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 7.7e-123 444.5 382 62.8
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 2.2e-122 443.0 384 62.8
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 5.0e-122 441.8 378 61.9
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 6.5e-122 441.4 383 61.9
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 8.5e-122 441.0 384 63.0
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.1e-121 440.7 379 63.9
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.4e-121 440.3 379 62.3
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.9e-121 439.9 383 62.7
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 2.5e-121 439.5 378 62.2
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 3.2e-121 439.1 382 62.3
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 7.2e-121 438.0 382 61.8
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 9.4e-121 437.6 382 61.5
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 1.2e-120 437.2 388 62.4
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 2.1e-120 436.4 384 62.0
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.6e-120 435.6 390 59.7
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 4.6e-120 435.3 405 58.3
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 6.1e-120 434.9 384 61.5
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 6.1e-120 434.9 382 60.7
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 6.1e-120 434.9 384 60.7
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 7.9e-120 434.5 382 59.9
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 1.0e-119 434.1 382 61.0
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 1.4e-119 433.7 378 61.1
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 1.8e-119 433.3 382 61.5
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 2.3e-119 433.0 382 60.5
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 3.0e-119 432.6 382 61.8
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 8.8e-119 431.0 382 59.7
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.1e-118 430.6 383 60.6
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 2.0e-118 429.9 411 56.9
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 2.6e-118 429.5 382 61.3
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 3.3e-118 429.1 376 61.4
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 4.4e-118 428.7 382 60.2
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 5.7e-118 428.3 383 60.8
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 1.3e-117 427.2 384 59.6
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 1.7e-117 426.8 382 61.3
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 4.8e-117 425.2 382 59.9
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 4.8e-117 425.2 388 60.1
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 1.4e-116 423.7 438 55.3
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 1.8e-116 423.3 384 60.4
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 2.4e-116 422.9 410 57.6
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 6.9e-116 421.4 380 59.5
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 6.9e-116 421.4 437 53.5
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 6.9e-116 421.4 380 60.0
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 1.2e-115 420.6 382 59.9
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.5e-115 420.2 378 61.1
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 3.4e-115 419.1 378 59.8
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 2.9e-114 416.0 388 60.3
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 3.8e-114 415.6 382 58.6
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 3.8e-114 415.6 372 59.9
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.1e-113 414.1 384 58.3
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 1.9e-113 413.3 407 56.3
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 2.5e-113 412.9 382 58.6
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 3.2e-113 412.5 435 53.8
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 5.5e-113 411.8 387 59.2
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 7.2e-113 411.4 382 58.6
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.1e-112 409.8 382 58.4
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 7.9e-112 407.9 382 58.9
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 1.4e-111 407.1 388 56.4
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 1.8e-111 406.8 382 57.6
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.8e-111 406.8 394 58.6
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 1.8e-111 406.8 384 57.6
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 5.2e-111 405.2 384 58.1
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 8.8e-111 404.4 384 57.3
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.1e-110 404.1 380 57.4
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 1.5e-110 403.7 382 57.1
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.0e-110 403.3 411 55.2
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 4.4e-110 402.1 380 57.4
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 7.4e-110 401.4 374 60.2
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 7.4e-110 401.4 382 56.8
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 9.7e-110 401.0 382 56.3
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 3.7e-109 399.1 385 57.7
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 3.7e-109 399.1 385 57.7
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 3.7e-109 399.1 384 56.8
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 3.7e-109 399.1 383 57.2
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 4.8e-109 398.7 382 56.5
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 4.1e-108 395.6 384 56.2
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 7.0e-108 394.8 385 57.1
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 2.0e-107 393.3 385 56.6
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 2.0e-107 393.3 385 56.6
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 3.5e-107 392.5 385 56.4
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 1.9e-105 386.7 361 58.7
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 1.2e-104 384.0 387 55.0
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 1.6e-104 383.6 402 54.2
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.8e-103 380.2 380 55.0
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 4.1e-100 369.0 380 55.3
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 1.9e-97 360.1 383 54.6
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 3.2e-97 359.4 334 59.6
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 1.8e-95 353.6 327 58.7
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 4.4e-94 349.0 385 51.9
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 5.7e-94 348.6 386 51.0
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 7.5e-94 348.2 382 52.6
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 2.1e-88 330.1 410 49.0
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 8.0e-88 328.2 271 67.2
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.3e-82 310.8 375 49.3
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 2.1e-80 303.5 273 61.2
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 4.6e-51 206.1 241 48.5
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 7.8e-51 205.3 417 36.0
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 6.0e-43 179.1 460 32.2
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.7e-37 161.0 158 56.3
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.2e-36 156.8 167 53.3
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 9.3e-36 155.2 158 55.1
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.3e-33 146.7 105 66.7
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 1.3e-29 134.8 340 33.8
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.7e-29 134.4 105 64.8
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 2.9e-29 133.7 106 59.4
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 6.4e-29 132.5 109 65.1
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.3e-26 124.8 167 46.7
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 3.0e-26 123.6 105 55.2
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.0e-26 123.6 147 48.3
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 2.5e-25 120.6 106 55.7
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 5.5e-20 102.8 95 61.1
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 7.9e-19 99.0 84 59.5
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 3.8e-13 80.1 124 37.9


User provided reference genes

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