Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 7.9e-52 206.8 105 100.0
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 4.3e-50 201.1 103 98.1
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 5.3e-48 194.1 105 91.4
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 7.2e-45 183.7 104 86.5
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 2.1e-44 182.2 104 84.6
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 3.9e-43 177.9 105 85.7
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 5.1e-43 177.6 105 81.9
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 6.7e-43 177.2 105 84.8
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 6.7e-43 177.2 105 84.8
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 6.7e-43 177.2 105 83.8
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 1.1e-42 176.4 102 85.3
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 1.1e-42 176.4 105 86.7
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 1.1e-42 176.4 103 80.6
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 3.3e-42 174.9 105 82.9
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 1.7e-41 172.6 103 85.4
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 3.7e-41 171.4 105 83.8
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 3.7e-41 171.4 105 81.0
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 3.7e-41 171.4 104 78.8
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 4.8e-41 171.0 105 79.0
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 4.8e-41 171.0 104 81.7
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 6.3e-41 170.6 105 82.9
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 8.2e-41 170.2 103 80.6
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 1.1e-40 169.9 103 83.5
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 1.4e-40 169.5 99 82.8
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.8e-40 169.1 104 77.9
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 1.8e-40 169.1 101 83.2
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 2.4e-40 168.7 105 81.9
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 2.4e-40 168.7 102 81.4
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 3.1e-40 168.3 103 82.5
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 3.1e-40 168.3 105 81.0
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 5.3e-40 167.5 102 80.4
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 6.9e-40 167.2 105 81.0
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.5e-39 166.0 105 76.2
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 2.6e-39 165.2 102 79.4
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 2.6e-39 165.2 105 79.0
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 3.4e-39 164.9 100 81.0
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 4.5e-39 164.5 102 78.4
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 7.7e-39 163.7 103 79.6
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 7.7e-39 163.7 102 79.4
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 1.3e-38 162.9 105 79.0
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 1.3e-38 162.9 105 78.1
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.7e-38 162.5 102 77.5
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 2.2e-38 162.2 100 81.0
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 2.2e-38 162.2 103 79.6
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 2.2e-38 162.2 105 80.0
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 2.9e-38 161.8 105 79.0
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 2.9e-38 161.8 102 78.4
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 3.8e-38 161.4 105 79.0
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 6.5e-38 160.6 95 84.2
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 6.5e-38 160.6 99 79.8
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 1.1e-37 159.8 104 75.0
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.9e-37 159.1 95 85.3
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 2.5e-37 158.7 105 74.3
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 3.2e-37 158.3 102 76.5
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 4.2e-37 157.9 103 76.7
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 1.2e-36 156.4 105 75.2
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 2.7e-36 155.2 103 75.7
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 4.7e-36 154.5 103 73.8
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 6.1e-36 154.1 101 73.3
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.3e-35 152.1 92 81.5
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 3.0e-35 151.8 95 80.0
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 8.8e-35 150.2 100 72.0
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 8.8e-35 150.2 92 80.4
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 1.5e-34 149.4 92 79.3
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 3.3e-34 148.3 92 79.3
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 3.3e-34 148.3 92 80.4
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 9.7e-34 146.7 90 81.1
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 9.7e-34 146.7 92 78.3
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 1.7e-33 146.0 99 71.7
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 1.7e-33 146.0 105 68.6
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 2.8e-33 145.2 102 67.6
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 2.8e-33 145.2 105 68.6
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 3.7e-33 144.8 104 72.1
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 4.8e-33 144.4 99 69.7
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 1.1e-32 143.3 103 70.9
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 1.4e-32 142.9 89 76.4
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 9.1e-32 140.2 90 76.7
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 9.1e-32 140.2 90 76.7
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 1.2e-31 139.8 92 75.0
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 1.2e-31 139.8 105 65.7
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 4.5e-31 137.9 92 73.9
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 5.9e-31 137.5 92 72.8
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 1.3e-30 136.3 90 74.4
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 1.7e-30 136.0 90 74.4
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 3.8e-30 134.8 92 71.7
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 3.8e-30 134.8 94 73.4
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 4.2e-29 131.3 91 71.4
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 1.6e-28 129.4 93 67.7
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.1e-28 129.0 76 84.2
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 2.7e-28 128.6 76 84.2
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 2.7e-28 128.6 89 69.7
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 3.0e-27 125.2 76 81.6
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 2.2e-25 119.0 100 58.0
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 3.7e-25 118.2 90 70.0
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 3.7e-25 118.2 76 77.6
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 3.7e-25 118.2 76 75.0
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 1.1e-24 116.7 79 73.4
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 1.4e-24 116.3 74 78.4
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 1.4e-24 116.3 80 72.5
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 1.4e-24 116.3 75 74.7
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 2.4e-24 115.5 100 61.0
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 3.1e-24 115.2 74 77.0
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 7.7e-23 110.5 75 73.3
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 6.5e-22 107.5 78 69.2
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 8.5e-22 107.1 93 61.3
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 4.2e-21 104.8 64 78.1
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 2.7e-20 102.1 73 68.5
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 1.4e-19 99.8 64 79.7
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 3.4e-18 95.1 97 51.5
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 1.8e-16 89.4 62 77.4
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 9.1e-16 87.0 98 52.0
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.2e-15 86.7 78 56.4
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 1.6e-15 86.3 86 50.0
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 3.5e-15 85.1 75 58.7
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 1.5e-13 79.7 86 53.5
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 1.9e-13 79.3 87 51.7
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 2.5e-13 79.0 52 75.0
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 7.7e-07 57.4 37 70.3
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 6.6e-06 54.3 109 36.7


User provided reference genes

Program Settings