Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015377 Chenopodium quinoa HOM05D000079 ORTHO05D137986 7.0e-56 220.3 106 100.0
AUR62020711 Chenopodium quinoa HOM05D000079 ORTHO05D000211 8.6e-30 133.7 101 62.4
EL10Ac2g03840 Beta vulgaris HOM05D000079 ORTHO05D000211 2.3e-19 99.0 110 50.9
EL10Ac2g03848 Beta vulgaris HOM05D000079 ORTHO05D000211 2.3e-19 99.0 110 50.9
AUR62009466 Chenopodium quinoa HOM05D000079 ORTHO05D000211 1.3e-17 93.2 116 46.6
EL10Ac2g03850 Beta vulgaris HOM05D000079 ORTHO05D000211 1.9e-16 89.4 108 47.2
EL10Ac2g03841 Beta vulgaris HOM05D000079 ORTHO05D000211 4.1e-16 88.2 108 46.3
EL10Ac2g03853 Beta vulgaris HOM05D000079 ORTHO05D000211 4.1e-16 88.2 108 46.3
AUR62028013 Chenopodium quinoa HOM05D000079 ORTHO05D000211 4.0e-11 71.6 59 57.6
MD16G1253400 Malus domestica HOM05D000079 ORTHO05D000211 3.4e-10 68.6 109 36.7
GSVIVG01010912001 Vitis vinifera HOM05D000079 ORTHO05D000211 3.4e-10 68.6 108 40.7
CANSAT01G2282 Cannabis sativa HOM05D000079 ORTHO05D000211 7.6e-10 67.4 104 37.5
Atru.chr7.829 Acer truncatum HOM05D000079 ORTHO05D000211 3.2e-08 62.0 106 34.0
Ah.09g234200 Amaranthus hybridus HOM05D000079 ORTHO05D000211 4.1e-08 61.6 104 35.6
ECA236G4304 Erigeron canadensis HOM05D000079 ORTHO05D000211 4.1e-08 61.6 111 36.9
Ah.04g150330 Amaranthus hybridus HOM05D000079 ORTHO05D000211 5.4e-08 61.2 104 37.5
Glyma.15G241300 Glycine max HOM05D000079 ORTHO05D000211 5.4e-08 61.2 108 37.0
FAN13G1957 Fragaria x ananassa HOM05D000079 ORTHO05D000211 9.2e-08 60.5 92 40.2
FAN18G1852 Fragaria x ananassa HOM05D000079 ORTHO05D000211 9.2e-08 60.5 92 40.2
FAN18G2947 Fragaria x ananassa HOM05D000079 ORTHO05D000211 9.2e-08 60.5 92 40.2
Lj2P581T7 Lonicera japonica HOM05D000079 ORTHO05D000211 1.2e-07 60.1 103 37.9
Lj2P585T30 Lonicera japonica HOM05D000079 ORTHO05D000211 1.2e-07 60.1 103 37.9
Eucgr.J03136 Eucalyptus grandis HOM05D000079 ORTHO05D000211 1.6e-07 59.7 110 34.5
CANSAT21G0255 Cannabis sativa HOM05D000079 ORTHO05D000211 2.7e-07 58.9 106 37.7
Lj2P584T14 Lonicera japonica HOM05D000079 ORTHO05D000211 2.7e-07 58.9 104 36.5
FvH4_5g22390 Fragaria vesca HOM05D000079 ORTHO05D000211 3.5e-07 58.5 92 39.1
FAN08G2120 Fragaria x ananassa HOM05D000079 ORTHO05D000211 3.5e-07 58.5 92 40.2
Eucgr.C02267 Eucalyptus grandis HOM05D000079 ORTHO05D000211 4.6e-07 58.2 107 32.7
Lj2P574T2 Lonicera japonica HOM05D000079 ORTHO05D000211 6.0e-07 57.8 100 36.0
Lj2P582T2 Lonicera japonica HOM05D000079 ORTHO05D000211 6.0e-07 57.8 100 36.0
QL11p004882 Quercus lobata HOM05D000079 ORTHO05D000211 6.0e-07 57.8 105 31.4
Carub.0003s3331 Capsella rubella HOM05D000079 ORTHO05D000211 7.8e-07 57.4 110 35.5
vmacro16780 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 7.8e-07 57.4 103 34.0
Cfa013423 Carpinus fangiana HOM05D000079 ORTHO05D000211 1.0e-06 57.0 106 33.0
vmacro16781 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 1.0e-06 57.0 112 33.9
RcHm_v2.0_Chr7g0210141 Rosa chinensis HOM05D000079 ORTHO05D000211 1.3e-06 56.6 93 35.5
Phvul.003G139325 Phaseolus vulgaris HOM05D000079 ORTHO05D000211 1.7e-06 56.2 107 33.6
Aa31LG8G16130 Aethionema arabicum HOM05D000079 ORTHO05D000211 2.3e-06 55.8 103 31.1
Prupe.1G079800 Prunus persica HOM05D000079 ORTHO05D000211 2.3e-06 55.8 108 33.3
THA.LOC104814627 Tarenaya hassleriana HOM05D000079 ORTHO05D000211 2.3e-06 55.8 104 30.8
AUR62020975 Chenopodium quinoa HOM05D000079 ORTHO05D000211 3.9e-06 55.1 109 26.6
HanXRQChr06g0170381 Helianthus annuus HOM05D000079 ORTHO05D000211 3.9e-06 55.1 111 32.4
Oeu055845.1 Olea europaea HOM05D000079 ORTHO05D000211 3.9e-06 55.1 108 33.3
TWI75G0717 Tripterygium wilfordii HOM05D000079 ORTHO05D000211 3.9e-06 55.1 102 32.4
VMungo1215G1842 Vigna mungo HOM05D000079 ORTHO05D000211 3.9e-06 55.1 110 32.7
Ciclev10008265m.g Citrus clementina HOM05D000079 ORTHO05D000211 5.1e-06 54.7 108 31.5
Cc05_g02710 Coffea canephora HOM05D000079 ORTHO05D000211 5.1e-06 54.7 110 32.7
Dinv02606 Davidia involucrata HOM05D000079 ORTHO05D000211 5.1e-06 54.7 101 34.7
ECA234G2841 Erigeron canadensis HOM05D001787 ORTHO05D003488 5.1e-06 54.7 106 27.4
GSVIVG01023651001 Vitis vinifera HOM05D000079 ORTHO05D000211 5.1e-06 54.7 111 31.5
Lj7P462T24 Lonicera japonica HOM05D000079 ORTHO05D000211 6.6e-06 54.3 107 33.6
Psat4g077600 Pisum sativum HOM05D000079 ORTHO05D000211 6.6e-06 54.3 100 30.0
vmacro16778 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 6.6e-06 54.3 110 31.8
CSS0007718 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D000211 8.6e-06 53.9 117 32.5
Potri.006G165200 Populus trichocarpa HOM05D000079 ORTHO05D000211 8.6e-06 53.9 103 32.0


User provided reference genes

Program Settings