Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 3.3e-144 515.0 255 100.0
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 3.0e-137 491.9 255 96.1
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 4.6e-122 441.4 262 84.0
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 3.3e-120 435.3 261 83.5
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.1e-102 377.1 267 73.8
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 2.6e-101 372.5 254 74.0
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 1.3e-100 370.2 212 83.0
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.5e-99 366.7 265 69.1
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 2.5e-99 365.9 222 78.8
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 7.2e-99 364.4 255 71.8
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 9.4e-99 364.0 251 71.3
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 9.4e-99 364.0 251 71.3
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 1.2e-98 363.6 261 70.1
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 6.1e-98 361.3 206 83.0
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 6.1e-98 361.3 206 83.0
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 3.0e-97 359.0 249 71.9
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 3.9e-97 358.6 260 70.8
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 6.7e-97 357.8 205 81.5
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 6.7e-97 357.8 243 74.1
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.5e-96 356.7 248 71.4
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 2.0e-96 356.3 253 71.9
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 3.3e-96 355.5 199 83.9
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 9.7e-96 354.0 262 67.2
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 9.7e-96 354.0 260 69.2
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 1.3e-95 353.6 214 78.5
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 2.2e-95 352.8 252 71.4
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 2.8e-95 352.4 210 80.0
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 2.8e-95 352.4 202 82.2
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 3.7e-95 352.1 260 68.8
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 4.8e-95 351.7 263 68.1
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 6.3e-95 351.3 250 70.4
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 8.2e-95 350.9 204 80.4
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 8.2e-95 350.9 262 66.4
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 8.2e-95 350.9 241 72.2
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 1.8e-94 349.7 215 77.7
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 1.8e-94 349.7 218 77.5
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 2.4e-94 349.4 248 71.8
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 3.1e-94 349.0 210 79.0
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 4.1e-94 348.6 221 75.1
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 2.6e-93 345.9 246 69.5
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 4.5e-93 345.1 217 75.6
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.0e-92 344.0 255 68.2
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 1.0e-92 344.0 191 84.8
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.7e-92 343.2 218 77.1
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 2.2e-92 342.8 263 66.2
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 2.2e-92 342.8 260 66.9
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 2.2e-92 342.8 252 71.4
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 2.9e-92 342.4 251 70.5
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 2.9e-92 342.4 252 68.3
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.8e-92 342.0 253 68.8
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 3.8e-92 342.0 197 82.2
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 3.8e-92 342.0 256 68.0
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 5.0e-92 341.7 255 67.5
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 1.9e-91 339.7 196 80.1
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.9e-91 339.7 191 82.7
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 3.2e-91 339.0 243 69.1
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 4.2e-91 338.6 269 68.8
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 5.5e-91 338.2 257 66.5
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 5.5e-91 338.2 265 68.7
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 7.2e-91 337.8 195 80.0
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 9.4e-91 337.4 257 66.1
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 9.4e-91 337.4 262 67.6
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 1.2e-90 337.0 257 66.5
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 1.2e-90 337.0 263 68.8
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 2.1e-90 336.3 253 67.6
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 2.1e-90 336.3 253 68.8
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.6e-90 335.5 255 68.6
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.4e-89 333.6 258 66.3
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.4e-89 333.6 258 66.3
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 1.8e-89 333.2 253 67.2
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 2.3e-89 332.8 254 67.7
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 5.2e-89 331.6 196 81.6
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 5.2e-89 331.6 274 64.6
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 2.0e-88 329.7 247 68.4
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 4.4e-88 328.6 247 68.4
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 1.3e-87 327.0 242 66.5
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 1.3e-87 327.0 199 78.9
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 1.8e-86 323.2 207 70.0
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 2.4e-86 322.8 251 67.3
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 2.4e-86 322.8 195 78.5
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 3.8e-84 315.5 199 74.9
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 3.6e-82 308.9 194 74.7
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.0e-81 307.4 237 63.3
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 1.5e-80 303.5 270 60.0
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.3e-79 300.4 255 61.2
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 1.3e-79 300.4 270 59.3
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 2.8e-79 299.3 267 57.7
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 2.4e-78 296.2 197 71.6
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 5.4e-78 295.0 168 81.0
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 2.3e-76 289.7 185 75.7
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 5.0e-76 288.5 347 48.7
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 9.5e-75 284.3 165 80.6
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 1.6e-74 283.5 265 59.6
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-73 280.8 226 60.6
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.4e-73 280.4 165 78.8
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 1.7e-68 263.5 169 76.9
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 8.9e-65 251.1 203 67.5
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 6.4e-55 218.4 123 83.7
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.4e-54 217.2 178 64.6
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 5.1e-52 208.8 188 62.8
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 3.3e-51 206.1 247 51.0
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 2.1e-50 203.4 122 77.9
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 2.3e-49 199.9 170 64.7
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 7.6e-48 194.9 183 57.9
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 2.9e-47 193.0 211 53.1
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 5.6e-43 178.7 216 47.7
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.6e-40 169.9 158 62.0
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 7.6e-40 168.3 487 29.6
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 3.2e-38 162.9 95 80.0
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 1.5e-32 144.1 213 43.2
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 4.9e-31 139.0 73 80.8
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.0e-28 129.8 73 79.5
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 2.5e-27 126.7 73 76.7
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.7e-15 87.4 96 50.0
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-06 55.1 39 71.8


User provided reference genes

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