Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 3.5e-152 541.6 273 100.0
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 2.1e-141 505.8 271 94.1
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 3.5e-99 365.5 275 71.6
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 1.3e-90 337.0 272 65.1
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 1.2e-78 297.4 274 58.8
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 1.1e-76 290.8 210 67.6
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 4.1e-76 288.9 227 62.1
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 2.0e-75 286.6 245 62.0
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 5.0e-74 282.0 209 65.1
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 1.5e-73 280.4 209 65.6
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.5e-73 280.4 274 56.2
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.5e-73 280.4 281 54.1
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 4.3e-73 278.9 259 57.1
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 7.3e-73 278.1 209 65.6
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 7.3e-73 278.1 274 55.5
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 7.3e-73 278.1 218 61.5
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 7.3e-73 278.1 189 71.4
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 9.5e-73 277.7 271 53.5
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 1.2e-72 277.3 244 58.6
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 4.7e-72 275.4 271 55.7
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 6.1e-72 275.0 276 55.8
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 6.1e-72 275.0 201 64.7
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 1.4e-71 273.9 226 61.1
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 1.8e-71 273.5 271 55.4
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 1.8e-71 273.5 200 67.0
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 5.2e-71 271.9 210 64.3
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 1.2e-70 270.8 214 59.8
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 1.5e-70 270.4 280 53.6
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 5.8e-70 268.5 272 53.3
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 5.8e-70 268.5 270 53.3
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 7.5e-70 268.1 261 55.9
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 7.5e-70 268.1 209 65.1
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 9.8e-70 267.7 270 53.3
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 2.2e-69 266.5 272 54.8
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 3.7e-69 265.8 271 56.8
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 6.4e-69 265.0 200 65.5
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 1.4e-68 263.8 279 50.9
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 1.4e-68 263.8 271 52.4
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.9e-68 263.5 207 59.9
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 3.2e-68 262.7 258 54.7
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 4.1e-68 262.3 270 55.2
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 7.0e-68 261.5 272 52.6
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 7.0e-68 261.5 222 60.4
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 7.0e-68 261.5 271 51.7
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 9.2e-68 261.2 275 49.8
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 1.2e-67 260.8 266 54.1
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 1.6e-67 260.4 272 55.5
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 1.6e-67 260.4 270 51.5
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 3.5e-67 259.2 278 53.2
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 4.6e-67 258.8 282 52.8
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 4.6e-67 258.8 282 52.8
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 6.0e-67 258.5 270 52.6
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 7.8e-67 258.1 272 51.1
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 7.8e-67 258.1 200 63.5
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 7.8e-67 258.1 279 52.7
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 1.7e-66 256.9 284 51.8
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 3.0e-66 256.1 215 60.9
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 3.0e-66 256.1 215 60.9
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 3.0e-66 256.1 215 60.9
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 5.0e-66 255.4 215 60.9
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 5.0e-66 255.4 215 60.9
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 6.6e-66 255.0 279 53.0
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 8.6e-66 254.6 265 55.1
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.1e-65 254.2 203 61.6
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 1.5e-65 253.8 281 50.2
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.9e-65 253.4 194 63.9
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 1.9e-65 253.4 229 57.6
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 7.3e-65 251.5 281 50.9
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 7.3e-65 251.5 281 50.9
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.6e-64 250.4 270 52.2
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.8e-64 249.6 262 53.1
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 3.6e-64 249.2 200 61.5
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 8.0e-64 248.1 278 49.3
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 8.9e-63 244.6 268 50.7
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 8.9e-63 244.6 285 50.5
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 1.3e-61 240.7 198 61.6
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 2.2e-61 240.0 198 61.1
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 2.2e-61 240.0 278 50.4
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.9e-60 236.9 202 59.9
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 4.1e-60 235.7 198 60.6
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 5.4e-60 235.3 277 48.0
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 9.2e-60 234.6 202 58.9
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 3.0e-58 229.6 209 58.4
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 5.1e-58 228.8 275 47.3
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 3.3e-57 226.1 192 58.3
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 1.2e-56 224.2 273 48.4
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.6e-56 223.8 192 58.9
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 3.6e-56 222.6 192 57.8
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 1.5e-54 217.2 276 46.0
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 5.8e-54 215.3 280 46.4
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 1.3e-53 214.2 199 51.8
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 1.7e-53 213.8 189 56.6
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 6.4e-53 211.8 275 46.2
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.1e-51 206.8 203 55.7
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 7.8e-51 204.9 194 53.6
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 3.9e-50 202.6 192 52.1
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 2.8e-48 196.4 192 53.6
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 2.0e-46 190.3 207 55.1
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 2.0e-46 190.3 192 49.5
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 2.6e-46 189.9 192 49.5
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 7.1e-44 181.8 198 52.0
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 6.6e-42 175.3 150 60.7
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 1.9e-41 173.7 183 49.7
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 5.6e-33 145.6 216 39.4
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 7.3e-33 145.2 185 43.2
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.3e-32 144.4 130 55.4
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 1.1e-20 104.8 187 39.0
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 1.1e-20 104.8 173 34.7
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 1.3e-18 97.8 186 33.9
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.5e-17 94.4 124 41.1
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 2.1e-16 90.5 156 35.9
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 1.1e-15 88.2 75 60.0
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 2.2e-13 80.5 63 65.1
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 7.1e-12 75.5 64 56.2
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 4.6e-11 72.8 66 59.1
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 3.0e-10 70.1 66 57.6
Nn3g21845 Nelumbo nucifera HOM05D006815 ORTHO05D008536 4.5e-06 56.2 42 59.5


User provided reference genes

Program Settings