Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015183 Chenopodium quinoa HOM05D000891 ORTHO05D011021 8.9e-160 567.0 310 100.0
AUR62017650 Chenopodium quinoa HOM05D000891 ORTHO05D011021 1.4e-120 436.8 359 73.0
Ah.01g013050 Amaranthus hybridus HOM05D000891 ORTHO05D011021 3.7e-97 359.0 359 59.1
CsaV3_3G041130 Cucumis sativus L. HOM05D000891 ORTHO05D011021 5.7e-58 228.8 361 36.8
Lj8A737T25 Lonicera japonica HOM05D000891 ORTHO05D011021 2.3e-54 216.9 364 42.6
MELO3C009843.2 Cucumis melo HOM05D000891 ORTHO05D011021 7.3e-53 211.8 357 41.7
Dinv12793 Davidia involucrata HOM05D000891 ORTHO05D011021 2.3e-46 190.3 353 40.8
ClCG10G015370 Citrullus lanatus HOM05D000891 ORTHO05D011021 1.2e-44 184.5 357 32.8
PGR044G1927 Punica granatum HOM05D000891 ORTHO05D011021 1.6e-44 184.1 362 32.9
Eucgr.J00281 Eucalyptus grandis HOM05D000891 ORTHO05D011021 4.0e-43 179.5 365 37.8
TWI77G0594 Tripterygium wilfordii HOM05D000891 ORTHO05D011021 4.9e-41 172.6 361 36.3
QL03p043301 Quercus lobata HOM05D000891 ORTHO05D011021 1.4e-40 171.0 359 36.8
GSVIVG01010212001 Vitis vinifera HOM05D000891 ORTHO05D011021 2.4e-40 170.2 355 39.4
Duzib251G0184 Durio zibethinus HOM05D000891 ORTHO05D011021 3.2e-40 169.9 361 38.5
ECA233G3340 Erigeron canadensis HOM05D000891 ORTHO05D011021 1.2e-39 167.9 364 35.2
COL.COLO4_27643 Corchorus olitorius HOM05D000891 ORTHO05D011021 4.6e-39 166.0 360 38.6
Sed0009198 Sechium edule HOM05D000891 ORTHO05D011021 6.6e-38 162.2 361 37.1
Gohir.A13G026800 Gossypium hirsutum HOM05D000891 ORTHO05D011021 8.6e-38 161.8 362 37.6
Gorai.013G028800 Gossypium raimondii HOM05D000891 ORTHO05D011021 8.6e-38 161.8 360 37.2
Gohir.D13G025600 Gossypium hirsutum HOM05D000891 ORTHO05D011021 2.5e-37 160.2 358 37.2
Actinidia34496 Actinidia chinensis HOM05D000891 ORTHO05D011021 3.6e-36 156.4 364 35.7
Gohir.A11G271366 Gossypium hirsutum HOM05D000891 ORTHO05D011021 3.6e-36 156.4 274 41.6
Thecc.02G309800 Theobroma cacao HOM05D000891 ORTHO05D011021 6.6e-30 135.6 379 32.2
Cpa.g.sc8.290 Carica papaya HOM05D000891 ORTHO05D011021 5.6e-29 132.5 365 34.0
Lsat_1_v5_gn_8_33421 Lactuca sativa HOM05D000891 ORTHO05D011021 8.1e-28 128.6 384 31.8
DCAR_030407 Daucus carota HOM05D000891 ORTHO05D011021 1.1e-27 128.3 369 32.2
Aqoxy3G00024 Aquilegia oxysepala HOM05D000891 ORTHO05D011021 3.1e-27 126.7 361 36.0
Zm00001eb259410 Zea mays HOM05D027950 ORTHO05D011021 1.4e-24 117.9 360 28.3
PGR044G0747 Punica granatum HOM05D000891 ORTHO05D011021 1.9e-21 107.5 195 36.4
HPP92_005055 Vanilla planifolia HOM05D000891 ORTHO05D011021 1.2e-18 98.2 363 31.7
Nn4g24892 Nelumbo nucifera HOM05D000891 ORTHO05D011021 4.2e-16 89.7 169 32.5
Os02g0829800 Oryza sativa ssp. japonica HOM05D000891 ORTHO05D011021 2.1e-15 87.4 360 24.4
HPP92_012852 Vanilla planifolia HOM05D000891 ORTHO05D011021 6.6e-14 82.4 353 30.3
HanXRQChr13g0392791 Helianthus annuus HOM05D000891 ORTHO05D011021 1.1e-13 81.6 155 31.6
CDE12G0148 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 5.6e-13 79.3 305 24.9
HPP92_012847 Vanilla planifolia HOM05D000891 ORTHO05D011021 5.6e-13 79.3 353 30.0
arahy.Tifrunner.gnm1.ann1.B0BY4Q Arachis hypogaea HOM05D000891 ORTHO05D000761 7.3e-13 79.0 340 22.6
arahy.Tifrunner.gnm1.ann1.LDS0KH Arachis hypogaea HOM05D000891 ORTHO05D000761 7.3e-13 79.0 340 22.6
Duzib248G0648 Durio zibethinus HOM05D000891 ORTHO05D011021 7.3e-13 79.0 95 49.5
Atru.chr10.968 Acer truncatum HOM05D000891 ORTHO05D000761 2.8e-12 77.0 301 24.6
ATR0618G180 Amborella trichopoda HOM05D000891 ORTHO05D000761 6.2e-12 75.9 131 33.6
Gohir.A09G069200 Gossypium hirsutum HOM05D000891 ORTHO05D000761 8.1e-12 75.5 299 22.7
MBI03_g33920_MAGBIO Magnolia biondii HOM05D000891 ORTHO05D000761 1.1e-11 75.1 134 32.8
HanXRQChr14g0440391 Helianthus annuus HOM05D000891 ORTHO05D000761 1.8e-11 74.3 318 24.2
Rhsim01G0243200 Rhododendron simsii HOM05D000891 ORTHO05D011021 2.4e-11 73.9 99 44.4
ECA238G4369 Erigeron canadensis HOM05D000891 ORTHO05D000761 3.1e-11 73.6 360 23.3
CDE02G2552 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 6.9e-11 72.4 303 24.8
AUR62044184 Chenopodium quinoa HOM05D000891 ORTHO05D000761 1.3e-09 68.2 282 24.8
Haze_15114 Corylus avellana HOM05D000891 ORTHO05D000761 2.9e-09 67.0 354 21.2
Duzib160G0410 Durio zibethinus HOM05D000891 ORTHO05D000761 3.8e-09 66.6 343 21.0
MD15G1265700 Malus domestica HOM05D000891 ORTHO05D000761 6.4e-09 65.9 356 22.8
Dinv17858 Davidia involucrata HOM05D000891 ORTHO05D000761 8.4e-09 65.5 299 30.8
CiPaw.01G035200 Carya illinoinensis HOM05D000891 ORTHO05D000761 1.1e-08 65.1 357 21.3
A08p22340 Brassica napus HOM05D000891 ORTHO05D000761 1.4e-08 64.7 357 20.7
Prupe.7G151800 Prunus persica HOM05D000891 ORTHO05D000761 1.4e-08 64.7 358 22.9
Aqoxy4G01892 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 1.9e-08 64.3 177 28.2
BcaC03g15998 Brassica carinata HOM05D000891 ORTHO05D000761 1.9e-08 64.3 339 21.8
CSS0040738 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 1.9e-08 64.3 356 19.9
Os10g0484900 Oryza sativa ssp. japonica HOM05D027950 ORTHO05D011021 1.9e-08 64.3 85 44.7
BraA08t34190Z Brassica rapa HOM05D000891 ORTHO05D000761 2.4e-08 63.9 357 20.7
Actinidia26936 Actinidia chinensis HOM05D000891 ORTHO05D000761 3.2e-08 63.5 235 26.0
AL2G41370 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 3.2e-08 63.5 339 27.7
BcaB03g12377 Brassica carinata HOM05D000891 ORTHO05D000761 3.2e-08 63.5 357 20.7
CDE12G0214 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 3.2e-08 63.5 257 23.7
BcaB05g25293 Brassica carinata HOM05D000891 ORTHO05D000761 4.2e-08 63.2 339 21.8
A03p38070 Brassica napus HOM05D000891 ORTHO05D000761 5.4e-08 62.8 158 29.1
A07p26530 Brassica napus HOM05D000891 ORTHO05D000761 5.4e-08 62.8 335 22.4
BraA03t12960Z Brassica rapa HOM05D000891 ORTHO05D000761 5.4e-08 62.8 158 29.1
CDE05G2408 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 5.4e-08 62.8 117 33.3
Ciclev10025762m.g Citrus clementina HOM05D000891 ORTHO05D000761 5.4e-08 62.8 358 27.1
Lsat_1_v5_gn_2_76721 Lactuca sativa HOM05D000891 ORTHO05D000761 5.4e-08 62.8 360 22.2
MD05G1334700 Malus domestica HOM05D000891 ORTHO05D000761 5.4e-08 62.8 129 33.3
AL7G14330 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 7.1e-08 62.4 357 22.4
AT4G36680 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 7.1e-08 62.4 358 21.8
Duzib235G1047 Durio zibethinus HOM05D000891 ORTHO05D000761 7.1e-08 62.4 137 31.4
CARHR245040 Cardamine hirsuta HOM05D000891 ORTHO05D000761 9.3e-08 62.0 350 22.0
AUR62012568 Chenopodium quinoa HOM05D000891 ORTHO05D000761 9.3e-08 62.0 142 31.0
Gohir.A06G186500 Gossypium hirsutum HOM05D000891 ORTHO05D000761 9.3e-08 62.0 338 25.4
Nn1g07110 Nelumbo nucifera HOM05D000891 ORTHO05D000761 9.3e-08 62.0 81 44.4
Potri.011G001100 Populus trichocarpa HOM05D000891 ORTHO05D000761 9.3e-08 62.0 264 23.5
HanXRQChr05g0130841 Helianthus annuus HOM05D000891 ORTHO05D000761 1.2e-07 61.6 160 30.0
Sc03g0001890 Simmondsia chinensis HOM05D000891 ORTHO05D000761 1.2e-07 61.6 117 34.2
C01p51940 Brassica napus HOM05D000891 ORTHO05D000761 1.6e-07 61.2 159 26.4
BolC1t05142H Brassica oleracea HOM05D000891 ORTHO05D000761 1.6e-07 61.2 159 26.4
Sabra11G0000300 Salix brachista HOM05D000891 ORTHO05D000761 1.6e-07 61.2 265 24.9
HPP92_015175 Vanilla planifolia HOM05D027950 ORTHO05D011021 1.6e-07 61.2 104 37.5
BcaC01g04016 Brassica carinata HOM05D000891 ORTHO05D000761 2.7e-07 60.5 112 34.8
A01p40400 Brassica napus HOM05D000891 ORTHO05D000761 2.7e-07 60.5 159 26.4
C03p46200 Brassica napus HOM05D000891 ORTHO05D000761 2.7e-07 60.5 112 34.8
BraA01t04075Z Brassica rapa HOM05D000891 ORTHO05D000761 2.7e-07 60.5 159 26.4
Thhalv10018671m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 2.7e-07 60.5 337 21.4
HanXRQChr15g0482791 Helianthus annuus HOM05D000891 ORTHO05D000761 2.7e-07 60.5 306 24.2
Lalb_Chr14g0373751 Lupinus albus HOM05D000891 ORTHO05D000761 2.7e-07 60.5 338 20.7
Medtr2g103550 Medicago truncatula HOM05D000891 ORTHO05D000761 2.7e-07 60.5 340 23.2
Sabra05G0103000 Salix brachista HOM05D000891 ORTHO05D000761 2.7e-07 60.5 357 23.0
Sp5g35650 Schrenkiella parvula HOM05D000891 ORTHO05D000761 2.7e-07 60.5 339 22.1
ATR0763G100 Amborella trichopoda HOM05D000891 ORTHO05D000761 3.5e-07 60.1 83 39.8
Aqoxy4G01893 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 3.5e-07 60.1 164 31.1
BolC3t16891H Brassica oleracea HOM05D000891 ORTHO05D000761 3.5e-07 60.1 112 33.9
Migut.D01063 Erythranthe guttata HOM05D000891 ORTHO05D000761 3.5e-07 60.1 319 21.3
Prupe.4G030500 Prunus persica HOM05D000891 ORTHO05D000761 3.5e-07 60.1 164 28.7
CSS0031339 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 4.6e-07 59.7 118 33.1
CARHR074340 Cardamine hirsuta HOM05D000891 ORTHO05D000761 4.6e-07 59.7 339 22.1
Atru.chr3.547 Acer truncatum HOM05D000891 ORTHO05D000761 6.0e-07 59.3 360 21.1
Actinidia05549 Actinidia chinensis HOM05D000891 ORTHO05D000761 6.0e-07 59.3 131 33.6
Cfa000283 Carpinus fangiana HOM05D000891 ORTHO05D000761 6.0e-07 59.3 123 30.9
Thhalv10027579m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 6.0e-07 59.3 350 21.4
Gohir.D06G192800 Gossypium hirsutum HOM05D000891 ORTHO05D000761 6.0e-07 59.3 338 19.5
Solyc02g085650.4 Solanum lycopersicum HOM05D001985 ORTHO05D000761 6.0e-07 59.3 351 21.1
BolC2t09765H Brassica oleracea HOM05D000891 ORTHO05D000761 7.9e-07 58.9 339 27.1
Migut.H00180 Erythranthe guttata HOM05D000891 ORTHO05D000761 7.9e-07 58.9 231 30.7
ECA236G1633 Erigeron canadensis HOM05D000891 ORTHO05D000761 1.0e-06 58.5 176 27.8
Nitab4.5_0007448g0010 Nicotiana tabacum HOM05D000891 ORTHO05D000761 1.0e-06 58.5 358 24.0
Zm00001eb045450 Zea mays HOM05D027950 ORTHO05D011021 1.0e-06 58.5 85 40.0
Aqoxy2G01746 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 1.3e-06 58.2 337 27.6
AT1G80150 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 1.3e-06 58.2 184 27.2
CANSAT56G1279 Cannabis sativa HOM05D000891 ORTHO05D000761 1.3e-06 58.2 164 27.4
ClCG01G022320 Citrullus lanatus HOM05D000891 ORTHO05D000761 1.3e-06 58.2 148 27.7
Haze_06658 Corylus avellana HOM05D000891 ORTHO05D000761 1.3e-06 58.2 117 31.6
TAR627G1176 Trochodendron aralioides HOM05D000891 ORTHO05D000761 1.3e-06 58.2 92 34.8
Migut.H01562 Erythranthe guttata HOM05D000891 ORTHO05D000761 1.8e-06 57.8 159 29.6
HPP92_020726 Vanilla planifolia HOM05D000891 ORTHO05D000761 1.8e-06 57.8 175 27.4
arahy.Tifrunner.gnm1.ann1.72G1G0 Arachis hypogaea HOM05D000891 ORTHO05D000761 3.0e-06 57.0 93 37.6
MSTRG.4712 Avicennia marina HOM05D000891 ORTHO05D000761 3.0e-06 57.0 319 21.9
BraA07t30296Z Brassica rapa HOM05D000891 ORTHO05D000761 3.0e-06 57.0 335 22.4
A02p23790 Brassica napus HOM05D000891 ORTHO05D000761 3.9e-06 56.6 339 27.1
BraA02t07370Z Brassica rapa HOM05D000891 ORTHO05D000761 3.9e-06 56.6 339 27.1
FAN21G3318 Fragaria x ananassa HOM05D000891 ORTHO05D000761 3.9e-06 56.6 283 23.0
Gorai.010G226600 Gossypium raimondii HOM05D000891 ORTHO05D000761 3.9e-06 56.6 338 25.4
Thecc.06G206500 Theobroma cacao HOM05D000891 ORTHO05D000761 3.9e-06 56.6 148 29.7
TWI18G0252 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 3.9e-06 56.6 106 33.0
ATR0618G089 Amborella trichopoda HOM05D000891 ORTHO05D000761 5.1e-06 56.2 80 33.8
Aqoxy7G02163 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 5.1e-06 56.2 338 26.9
Haze_16531 Corylus avellana HOM05D006819 ORTHO05D008763 5.1e-06 56.2 181 27.1
Duzib192G0933 Durio zibethinus HOM05D000891 ORTHO05D000761 5.1e-06 56.2 342 25.1
Nitab4.5_0002155g0070 Nicotiana tabacum HOM05D000891 ORTHO05D000761 5.1e-06 56.2 94 30.9
QL05p077799 Quercus lobata HOM05D000891 ORTHO05D000761 5.1e-06 56.2 112 32.1
C02p37530 Brassica napus HOM05D000891 ORTHO05D000761 6.7e-06 55.8 339 26.8
CSS0036990 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 6.7e-06 55.8 331 19.6
RcHm_v2.0_Chr5g0004781 Rosa chinensis HOM05D000891 ORTHO05D000761 6.7e-06 55.8 159 27.0
SalBow2G1681 Salvia bowleyana HOM05D000891 ORTHO05D000761 6.7e-06 55.8 327 20.5
Sp3g11320 Schrenkiella parvula HOM05D000891 ORTHO05D000761 6.7e-06 55.8 159 25.2
arahy.Tifrunner.gnm1.ann1.2A943I Arachis hypogaea HOM05D000891 ORTHO05D000761 8.7e-06 55.5 93 35.5
BcaB04g18745 Brassica carinata HOM05D000891 ORTHO05D000761 8.7e-06 55.5 292 28.8
A01p40390 Brassica napus HOM05D000891 ORTHO05D000761 8.7e-06 55.5 112 33.0
BraA01t04074Z Brassica rapa HOM05D000891 ORTHO05D000761 8.7e-06 55.5 112 33.0
Ca_01065_v3 Cicer arietinum L. HOM05D000891 ORTHO05D000761 8.7e-06 55.5 337 21.7
TAR626G0803 Trochodendron aralioides HOM05D000891 ORTHO05D000761 8.7e-06 55.5 100 36.0


User provided reference genes

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