Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 1.0e-99 366.7 184 100.0
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 5.8e-50 201.4 143 74.8
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 1.2e-42 177.2 122 71.3
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 2.7e-39 166.0 122 66.4
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 3.0e-38 162.5 122 68.9
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 4.3e-37 158.7 123 65.9
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 1.6e-36 156.8 122 59.8
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 2.8e-36 156.0 122 63.9
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 3.7e-36 155.6 122 61.5
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 1.1e-35 154.1 122 60.7
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 1.4e-35 153.7 123 61.8
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 2.4e-35 152.9 122 64.8
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 2.4e-35 152.9 122 63.9
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 3.1e-35 152.5 122 61.5
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 9.0e-35 151.0 122 61.5
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 9.0e-35 151.0 122 63.1
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 1.5e-34 150.2 122 59.8
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.5e-34 150.2 122 61.5
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 2.0e-34 149.8 122 62.3
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 2.0e-34 149.8 122 61.5
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 2.0e-34 149.8 122 62.3
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 2.6e-34 149.4 122 58.2
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 2.6e-34 149.4 123 61.0
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 2.6e-34 149.4 106 64.2
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 7.6e-34 147.9 126 58.7
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 1.0e-33 147.5 126 57.9
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 1.0e-33 147.5 122 59.8
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 1.3e-33 147.1 126 60.3
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 2.9e-33 146.0 126 58.7
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 3.8e-33 145.6 122 59.0
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 5.0e-33 145.2 122 63.1
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 5.0e-33 145.2 126 57.9
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 5.0e-33 145.2 122 59.8
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 6.5e-33 144.8 122 60.7
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 8.4e-33 144.4 122 59.0
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 1.1e-32 144.1 122 57.4
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 1.4e-32 143.7 120 56.7
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 1.9e-32 143.3 120 60.8
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 3.2e-32 142.5 122 57.4
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 5.5e-32 141.7 122 60.7
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 5.5e-32 141.7 120 58.3
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 5.5e-32 141.7 122 58.2
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 7.2e-32 141.4 123 57.7
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 7.2e-32 141.4 114 56.1
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 7.2e-32 141.4 123 60.2
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 9.3e-32 141.0 122 59.8
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 9.3e-32 141.0 124 62.9
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 1.2e-31 140.6 122 61.5
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 1.2e-31 140.6 122 58.2
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 2.1e-31 139.8 110 61.8
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 2.1e-31 139.8 122 58.2
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 2.7e-31 139.4 122 59.0
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 2.7e-31 139.4 117 57.3
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 2.7e-31 139.4 103 64.1
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 4.6e-31 138.7 108 60.2
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 4.6e-31 138.7 123 58.5
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 6.1e-31 138.3 120 56.7
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 6.1e-31 138.3 120 56.7
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 6.1e-31 138.3 114 57.0
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 6.1e-31 138.3 125 54.4
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 6.1e-31 138.3 120 60.8
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 7.9e-31 137.9 122 55.7
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 1.0e-30 137.5 125 54.4
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 1.3e-30 137.1 123 61.0
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 1.3e-30 137.1 122 56.6
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 1.8e-30 136.7 103 63.1
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 2.3e-30 136.3 122 56.6
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 3.0e-30 136.0 120 60.0
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 5.1e-30 135.2 122 57.4
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 5.1e-30 135.2 102 64.7
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 5.1e-30 135.2 103 62.1
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 5.1e-30 135.2 103 62.1
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 6.7e-30 134.8 104 60.6
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 8.7e-30 134.4 103 62.1
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 8.7e-30 134.4 110 59.1
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 1.1e-29 134.0 122 54.1
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 1.5e-29 133.7 119 58.0
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 1.9e-29 133.3 122 54.9
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.5e-29 132.9 103 62.1
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 2.5e-29 132.9 110 59.1
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 4.3e-29 132.1 120 56.7
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 3.7e-28 129.0 122 54.1
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 4.8e-28 128.6 122 53.3
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 4.8e-28 128.6 125 54.4
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 6.3e-28 128.3 122 53.3
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 6.3e-28 128.3 122 53.3
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 6.3e-28 128.3 122 53.3
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 6.3e-28 128.3 122 53.3
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 6.3e-28 128.3 110 57.3
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 8.2e-28 127.9 122 53.3
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 1.1e-27 127.5 122 51.6
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 3.1e-27 125.9 106 56.6
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 9.0e-27 124.4 98 61.2
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 9.0e-27 124.4 106 56.6
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 1.2e-26 124.0 132 51.5
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 7.7e-26 121.3 110 56.4
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 1.3e-25 120.6 125 51.2
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 8.5e-25 117.9 102 57.8
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 1.1e-24 117.5 103 58.3
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 5.5e-24 115.2 83 68.7
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 2.1e-23 113.2 83 66.3
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 1.8e-22 110.2 88 61.4
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-22 109.4 114 45.6
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 6.9e-19 98.2 106 46.2
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 9.1e-19 97.8 83 57.8
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 4.5e-18 95.5 87 56.3
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 1.4e-16 90.5 118 44.1
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 1.4e-16 90.5 118 44.1
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 2.5e-16 89.7 96 46.9
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 4.2e-16 89.0 108 42.6
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 9.4e-16 87.8 63 69.8
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 1.2e-15 87.4 148 37.8
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 1.8e-14 83.6 124 40.3
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 8.2e-12 74.7 139 36.7
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 1.8e-11 73.6 108 40.7
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 4.1e-11 72.4 68 55.9
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 7.0e-11 71.6 63 55.6
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 9.1e-11 71.2 63 55.6
CiPaw.03G154000 Carya illinoinensis HOM05D000172 ORTHO05D008216 1.7e-09 67.0 58 53.4
arahy.Tifrunner.gnm1.ann1.XV84RB Arachis hypogaea HOM05D000172 ORTHO05D008216 5.0e-09 65.5 63 52.4
DCAR_021134 Daucus carota HOM05D000172 ORTHO05D008216 5.0e-09 65.5 57 57.9
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 6.5e-09 65.1 63 50.8
Hund04586 Selenicereus undatus HOM05D035355 ORTHO05D008216 1.9e-08 63.5 106 40.6
Hund04588 Selenicereus undatus HOM05D035355 ORTHO05D008216 1.9e-08 63.5 106 40.6
AT1G04985 Arabidopsis thaliana HOM05D000172 ORTHO05D008216 2.5e-08 63.2 59 50.8
SGA_v2.0_scaffold74G24592 Striga asiatica HOM05D000172 ORTHO05D008216 3.0e-06 56.2 70 42.9


User provided reference genes

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