Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 2.8e-269 931.4 492 100.0
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 6.7e-194 681.0 448 74.6
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 2.1e-187 659.4 402 81.3
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 4.6e-142 508.8 268 94.8
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 1.0e-133 481.1 435 55.4
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 1.6e-131 473.8 450 55.1
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 1.1e-130 471.1 451 56.1
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 6.8e-130 468.4 429 56.4
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 9.9e-129 464.5 447 52.8
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 8.3e-128 461.5 430 54.2
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 1.4e-127 460.7 446 52.5
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 3.9e-125 452.6 446 51.8
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 8.6e-125 451.4 397 59.4
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 1.1e-124 451.1 447 52.3
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.5e-124 450.7 432 54.6
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 2.5e-124 449.9 464 52.6
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 9.5e-124 448.0 446 51.8
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 2.1e-123 446.8 433 54.5
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 2.4e-122 443.4 440 52.3
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 3.1e-122 443.0 430 52.3
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 5.2e-122 442.2 453 52.1
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 6.8e-122 441.8 430 51.9
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 6.8e-122 441.8 435 53.8
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 2.0e-121 440.3 453 51.7
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 9.9e-121 438.0 454 51.5
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.3e-120 437.6 430 51.6
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 2.2e-120 436.8 430 51.4
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 2.2e-120 436.8 445 52.4
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 2.9e-120 436.4 445 52.1
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 6.4e-120 435.3 440 52.5
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 1.1e-119 434.5 397 56.9
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 1.1e-119 434.5 430 52.8
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.9e-119 433.7 430 51.2
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 2.4e-119 433.3 449 51.7
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 4.2e-119 432.6 429 51.3
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 9.2e-119 431.4 454 50.9
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 9.2e-119 431.4 436 53.4
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.6e-118 430.6 398 56.5
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 7.8e-118 428.3 435 52.6
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 2.3e-117 426.8 453 52.3
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 2.3e-117 426.8 453 52.3
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 3.0e-117 426.4 453 52.3
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 3.9e-117 426.0 453 52.3
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 1.1e-116 424.5 453 52.3
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 1.1e-116 424.5 435 52.9
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 1.1e-116 424.5 396 55.3
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 1.9e-116 423.7 437 52.9
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 3.3e-116 422.9 454 50.4
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 5.6e-116 422.2 433 49.7
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 3.6e-115 419.5 456 49.3
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 1.4e-114 417.5 432 51.2
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.4e-114 416.8 433 49.2
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 3.1e-114 416.4 396 52.5
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 5.3e-114 415.6 449 49.7
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 5.3e-114 415.6 454 50.0
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 9.0e-114 414.8 488 45.7
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 1.5e-113 414.1 453 49.9
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 2.0e-113 413.7 449 49.4
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 2.0e-113 413.7 436 49.8
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 4.4e-113 412.5 436 48.9
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 5.8e-113 412.1 449 49.9
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 7.6e-113 411.8 433 48.7
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 7.6e-113 411.8 395 53.9
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 8.4e-112 408.3 433 47.1
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 3.2e-111 406.4 447 48.3
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 4.2e-111 406.0 448 50.0
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 7.1e-111 405.2 436 50.0
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 7.1e-111 405.2 433 46.7
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.2e-110 404.4 433 46.4
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 1.6e-110 404.1 439 49.0
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 1.6e-110 404.1 434 49.3
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 4.6e-110 402.5 401 53.4
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 4.6e-110 402.5 457 48.6
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 1.0e-109 401.4 455 47.9
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 1.3e-109 401.0 395 53.2
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 3.9e-109 399.4 433 47.6
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 8.7e-109 398.3 449 49.7
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 9.6e-108 394.8 449 49.4
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 6.2e-107 392.1 434 47.9
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 1.4e-106 391.0 446 46.2
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 1.8e-106 390.6 394 51.3
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 3.1e-106 389.8 399 52.6
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.5e-105 387.5 429 47.3
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 2.0e-105 387.1 434 46.5
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 7.6e-105 385.2 394 50.3
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 1.3e-104 384.4 467 45.6
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.1e-103 381.3 395 49.6
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 1.4e-103 380.9 384 52.3
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 7.1e-103 378.6 404 49.5
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 3.7e-99 366.3 513 41.7
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 2.9e-96 356.7 396 47.7
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 1.2e-94 351.3 426 47.4
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 6.0e-94 349.0 370 50.0
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 5.1e-93 345.9 439 45.1
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 5.7e-92 342.4 455 44.0
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 7.4e-92 342.0 457 44.0
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 2.8e-91 340.1 437 45.8
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 2.8e-91 340.1 439 44.6
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 6.9e-90 335.5 465 43.7
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 1.2e-89 334.7 432 42.8
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 4.5e-89 332.8 459 42.9
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 1.0e-88 331.6 451 41.9
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.7e-88 330.9 445 40.9
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 8.4e-88 328.6 445 42.5
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 8.4e-88 328.6 451 41.7
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 1.1e-87 328.2 461 41.9
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 1.9e-87 327.4 460 41.7
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 9.3e-87 325.1 460 38.7
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 1.3e-85 321.2 431 41.5
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 1.9e-84 317.4 317 51.4
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.5e-84 317.0 445 39.6
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 2.5e-84 317.0 403 44.9
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 7.7e-81 305.4 437 44.2
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 2.7e-78 297.0 451 39.5
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 6.1e-78 295.8 300 50.0
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 3.1e-74 283.5 308 48.4
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 3.1e-74 283.5 468 38.0
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 4.1e-74 283.1 409 42.1
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 3.1e-66 256.9 365 42.5
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 4.1e-66 256.5 402 36.3
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 5.9e-65 252.7 430 37.2
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 2.8e-59 233.8 410 32.9
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.0e-56 225.3 449 35.9
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 3.7e-43 180.3 304 37.8
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 1.0e-24 119.0 135 43.7
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 1.8e-21 108.2 162 40.1
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.1e-15 89.0 83 48.2
Sc21g0000680 Simmondsia chinensis HOM05D005756 ORTHO05D018916 1.6e-06 58.5 41 56.1
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 6.2e-06 56.6 53 54.7
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 8.1e-06 56.2 53 54.7


User provided reference genes

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