Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 3.7e-263 911.0 453 100.0
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 2.5e-256 888.3 453 97.8
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.5e-240 835.9 453 91.2
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 2.2e-146 523.1 453 60.7
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 7.7e-128 461.5 450 54.9
Hund01540 Selenicereus undatus HOM05D003575 ORTHO05D003587 2.2e-90 337.0 375 50.9
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 1.1e-68 265.0 447 39.6
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 2.2e-66 257.3 454 35.5
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 7.1e-65 252.3 442 35.1
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 7.3e-62 242.3 427 36.1
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.2e-59 235.0 434 34.1
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 2.0e-59 234.2 432 32.4
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 2.0e-59 234.2 433 35.6
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 2.6e-59 233.8 440 35.0
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 4.4e-59 233.0 427 32.1
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.4e-59 233.0 441 35.1
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 1.3e-58 231.5 434 32.9
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 1.3e-58 231.5 431 33.6
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 1.7e-58 231.1 448 33.7
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 2.9e-58 230.3 425 34.1
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 6.4e-58 229.2 440 31.8
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 6.4e-58 229.2 436 33.5
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 4.2e-57 226.5 445 33.0
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 4.2e-57 226.5 428 34.3
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 2.1e-56 224.2 454 32.6
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 2.7e-56 223.8 446 31.6
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 1.0e-55 221.9 426 33.8
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 2.3e-55 220.7 428 33.6
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 3.0e-55 220.3 424 32.8
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 5.1e-55 219.5 436 32.6
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 5.1e-55 219.5 437 31.6
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 5.1e-55 219.5 426 32.6
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 6.6e-55 219.2 432 32.4
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 8.7e-55 218.8 437 31.8
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 9.6e-54 215.3 427 33.7
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 1.3e-53 214.9 564 27.8
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 1.3e-53 214.9 447 33.1
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 1.3e-53 214.9 445 32.6
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 1.3e-53 214.9 494 30.8
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 1.6e-53 214.5 437 33.0
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.8e-53 213.0 441 31.7
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 6.2e-53 212.6 452 30.3
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 6.2e-53 212.6 443 30.7
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 1.1e-52 211.8 428 32.2
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 4.0e-52 209.9 437 31.6
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 4.0e-52 209.9 439 31.4
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 6.9e-52 209.1 452 30.1
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 6.9e-52 209.1 452 30.1
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 6.9e-52 209.1 444 31.3
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.2e-51 208.4 439 31.9
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 4.5e-51 206.5 428 31.1
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 1.7e-50 204.5 441 30.4
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.7e-50 204.5 441 30.4
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 2.2e-50 204.1 431 31.1
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 2.2e-50 204.1 444 31.5
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 6.4e-50 202.6 430 32.8
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 1.1e-49 201.8 425 31.1
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.9e-49 201.1 430 30.9
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 2.4e-49 200.7 427 32.6
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 2.4e-49 200.7 441 30.6
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 2.4e-49 200.7 452 32.5
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 4.2e-49 199.9 433 30.3
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 7.1e-49 199.1 433 30.5
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 9.3e-49 198.7 451 30.6
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 2.1e-48 197.6 448 31.0
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.8e-47 194.5 443 30.7
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 6.7e-47 192.6 430 31.2
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 8.7e-47 192.2 368 31.0
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 2.5e-46 190.7 362 31.8
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.3e-46 189.9 451 29.5
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 5.6e-46 189.5 436 29.6
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 1.3e-45 188.3 380 30.8
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 3.7e-45 186.8 451 30.4
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 1.8e-44 184.5 432 29.9
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 2.4e-44 184.1 430 29.1
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 3.1e-44 183.7 427 31.1
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 3.1e-44 183.7 430 29.1
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 4.0e-44 183.3 430 30.2
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 1.2e-43 181.8 429 28.4
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 5.8e-43 179.5 507 30.4
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 5.8e-43 179.5 432 27.8
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 2.2e-42 177.6 438 30.8
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 2.2e-42 177.6 436 30.0
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 8.4e-42 175.6 434 29.3
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.4e-41 174.9 478 27.6
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 4.2e-41 173.3 426 27.9
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 4.2e-41 173.3 428 29.4
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.2e-40 171.8 366 30.3
MELO3C030470.2 Cucumis melo HOM05D003575 ORTHO05D003587 6.0e-40 169.5 427 29.5
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 7.9e-40 169.1 409 30.1
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 7.9e-40 169.1 427 30.7
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 1.0e-39 168.7 355 31.5
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 1.3e-39 168.3 367 29.4
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 1.8e-39 167.9 426 28.9
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 2.3e-39 167.5 402 31.1
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 3.0e-39 167.2 367 30.5
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 1.1e-38 165.2 414 29.7
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 5.6e-38 162.9 471 27.6
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 7.4e-38 162.5 364 28.8
Sed0014379 Sechium edule HOM05D003575 ORTHO05D003587 1.6e-37 161.4 429 28.0
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.1e-36 158.7 362 28.7
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.2e-35 155.2 353 28.9
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 4.5e-35 153.3 430 27.0
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 4.5e-35 153.3 164 45.7
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.0e-34 152.1 430 27.7
Dinv21311 Davidia involucrata HOM05D003575 ORTHO05D003587 4.2e-33 146.7 288 36.8
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 1.6e-32 144.8 430 27.2
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 1.3e-31 141.7 129 53.5
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 3.0e-31 140.6 420 27.1
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 6.7e-31 139.4 181 39.8
Medtr3g082740 Medicago truncatula HOM05D003575 ORTHO05D003587 1.6e-29 134.8 330 30.0
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 5.3e-28 129.8 194 35.6
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 5.9e-27 126.3 164 37.2
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 1.7e-26 124.8 165 40.6
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 3.8e-26 123.6 189 32.8
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 3.8e-26 123.6 189 32.8
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 5.0e-26 123.2 164 36.0
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 8.5e-26 122.5 164 36.6
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 8.5e-26 122.5 166 36.1
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 3.2e-25 120.6 166 35.5
EL10Ac9g22882 Beta vulgaris HOM05D003575 ORTHO05D003587 9.4e-25 119.0 97 55.7
Aqoxy4G01549 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.2e-24 118.6 182 38.5
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 1.6e-24 118.2 166 34.9
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 1.6e-24 118.2 164 36.6
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 2.7e-24 117.5 163 38.0
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 3.6e-24 117.1 165 38.2
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 3.6e-24 117.1 194 33.0
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 4.6e-24 116.7 164 33.5
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 7.9e-24 115.9 163 37.4
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 1.0e-23 115.5 163 37.4
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 1.4e-23 115.2 163 37.4
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.4e-23 115.2 176 35.2
EL10Ac6g15056 Beta vulgaris HOM05D003575 ORTHO05D003587 3.0e-23 114.0 97 53.6
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 3.0e-23 114.0 186 35.5
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 6.7e-23 112.8 162 36.4
Cc00_g01040 Coffea canephora HOM05D003575 ORTHO05D003587 6.7e-23 112.8 194 32.0
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 8.8e-23 112.5 125 42.4
RcHm_v2.0_Chr2g0155791 Rosa chinensis HOM05D003575 ORTHO05D003587 1.5e-22 111.7 155 40.6
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 2.5e-22 110.9 171 29.8
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 4.3e-22 110.2 176 30.1
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 1.7e-21 108.2 174 35.6
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 1.7e-21 108.2 163 37.4
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 3.7e-21 107.1 165 34.5
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 8.2e-21 105.9 211 37.4
TPR.G40538 Trifolium pratense HOM05D003575 ORTHO05D003587 8.2e-21 105.9 153 35.9
FAN16G0569 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.1e-20 104.0 370 25.4
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 3.1e-20 104.0 167 31.7
MBI15_g06462_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 4.1e-20 103.6 342 24.3
MD09G1128800 Malus domestica HOM05D003575 ORTHO05D003587 5.3e-20 103.2 154 35.7
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 6.9e-20 102.8 165 35.8
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 9.1e-20 102.4 191 36.1
RcHm_v2.0_Chr2g0155771 Rosa chinensis HOM05D003575 ORTHO05D003587 2.6e-19 100.9 153 35.9
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.9e-19 99.8 179 33.0
FAN15G3143 Fragaria x ananassa HOM05D003575 ORTHO05D003587 7.7e-19 99.4 170 33.5
FvH4_2g12920 Fragaria vesca HOM05D003575 ORTHO05D003587 1.0e-18 99.0 170 33.5
FAN24G1566 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.0e-18 99.0 170 33.5
FAN20G0397 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.2e-18 97.8 170 32.9
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 6.5e-18 96.3 358 24.6
Zm00001eb287050 Zea mays HOM05D003575 ORTHO05D003587 1.4e-17 95.1 178 32.0
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 3.6e-16 90.5 101 46.5
PSO017G1253 Papaver somniferum HOM05D003575 ORTHO05D003587 1.8e-15 88.2 168 28.6
Lsat_1_v5_gn_8_78381 Lactuca sativa HOM05D003575 ORTHO05D003587 3.9e-15 87.0 142 34.5
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 5.1e-15 86.7 101 43.6
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 6.7e-15 86.3 105 40.0
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 8.8e-15 85.9 137 35.8
FAN14G3058 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.6e-14 84.3 113 38.9
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 3.7e-13 80.5 165 28.5
Aqoxy91s001 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 8.2e-13 79.3 117 37.6
PSO339G5808 Papaver somniferum HOM05D003575 ORTHO05D003587 8.2e-13 79.3 137 30.7
MBI15_g48140_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 1.4e-12 78.6 97 38.1
Os05g0386400 Oryza sativa ssp. japonica HOM05D003575 ORTHO05D003587 5.3e-12 76.6 192 29.2
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 1.5e-11 75.1 109 37.6
Mapoly0033s0032 Marchantia polymorpha HOM05D003575 ORTHO05D003587 2.6e-11 74.3 215 30.2
Oeu041110.1 Olea europaea HOM05D003575 ORTHO05D003587 1.3e-10 72.0 80 47.5
FvH4_3g20450 Fragaria vesca HOM05D039614 ORTHO05D045963 1.9e-09 68.2 80 38.8
FAN11G0216 Fragaria x ananassa HOM05D003575 ORTHO05D045963 1.9e-09 68.2 80 38.8
Zm00001eb264990 Zea mays HOM05D003575 ORTHO05D003587 1.9e-09 68.2 142 28.2
FvH4_6g40520 Fragaria vesca HOM05D003575 ORTHO05D003587 3.2e-09 67.4 99 35.4
Mapoly0021s0099 Marchantia polymorpha HOM05D003575 ORTHO05D003587 2.7e-08 64.3 146 25.3
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 3.9e-07 60.5 142 27.5
MD09G1128900 Malus domestica HOM05D003575 ORTHO05D003587 6.7e-07 59.7 64 43.8
Glyma.15G224002 Glycine max HOM05D003575 ORTHO05D003587 1.5e-06 58.5 72 34.7
SEGI_27817 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 2.0e-06 58.2 91 31.9
Lalb_Chr14g0362571 Lupinus albus HOM05D003575 ORTHO05D003587 4.4e-06 57.0 89 38.2
Mapoly0072s0063 Marchantia polymorpha HOM05D040683 ORTHO05D003587 7.4e-06 56.2 144 25.0


User provided reference genes

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