Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 6.7e-87 323.9 158 100.0
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.3e-86 321.6 158 98.7
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 2.5e-65 252.3 154 80.5
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 1.2e-64 250.0 193 67.4
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 7.4e-62 240.7 157 73.9
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.0e-55 220.3 157 70.7
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 2.3e-55 219.2 157 70.7
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 1.5e-54 216.5 156 71.2
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 2.6e-54 215.7 160 70.6
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 3.3e-54 215.3 157 68.2
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 1.7e-53 213.0 162 69.1
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 1.1e-52 210.3 156 68.6
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.2e-51 206.8 161 64.6
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.3e-50 203.4 157 64.3
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 3.8e-50 201.8 154 62.3
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 5.0e-50 201.4 158 67.7
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 8.5e-50 200.7 166 63.9
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 8.5e-50 200.7 156 67.9
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 8.5e-50 200.7 150 66.0
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.1e-49 200.3 158 65.2
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.5e-49 199.9 170 60.6
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.5e-49 199.9 156 68.6
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 1.5e-49 199.9 158 64.6
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 1.5e-49 199.9 158 63.3
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 4.2e-49 198.4 157 64.3
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 4.2e-49 198.4 167 63.5
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 5.5e-49 198.0 152 67.8
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 7.2e-49 197.6 155 61.3
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 9.4e-49 197.2 154 65.6
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.6e-48 196.4 156 61.5
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 1.6e-48 196.4 161 63.4
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 1.0e-47 193.7 169 60.4
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.0e-47 193.7 153 65.4
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 3.0e-47 192.2 159 62.3
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 4.0e-47 191.8 162 62.3
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 2.2e-45 186.0 170 60.6
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 3.7e-45 185.3 165 60.0
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 6.3e-45 184.5 165 60.0
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 1.8e-44 183.0 148 60.8
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 1.2e-43 180.3 156 57.1
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 1.2e-43 180.3 154 61.0
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.6e-43 179.9 153 60.1
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.0e-42 177.2 155 60.6
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 2.2e-42 176.0 157 60.5
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 2.9e-42 175.6 202 52.5
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 8.5e-42 174.1 164 56.7
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 1.1e-41 173.7 167 57.5
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.5e-41 173.3 166 57.2
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 2.5e-41 172.6 168 57.1
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 1.2e-40 170.2 153 56.9
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 1.2e-40 170.2 167 54.5
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 1.2e-40 170.2 151 57.6
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 2.1e-40 169.5 156 56.4
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 3.6e-40 168.7 154 56.5
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 4.7e-40 168.3 152 60.5
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.4e-39 166.8 161 54.7
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 2.3e-39 166.0 159 55.3
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 2.3e-39 166.0 164 56.1
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 2.3e-39 166.0 146 57.5
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 1.2e-38 163.7 166 54.8
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 1.5e-38 163.3 165 56.4
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 2.0e-38 162.9 155 53.5
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 4.4e-38 161.8 151 55.6
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 7.5e-38 161.0 155 52.9
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 2.8e-37 159.1 144 55.6
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 3.7e-37 158.7 126 62.7
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 1.4e-36 156.8 147 55.1
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 1.0e-34 150.6 149 54.4
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 1.0e-34 150.6 149 54.4
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 1.0e-34 150.6 149 54.4
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 1.0e-34 150.6 149 53.7
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 1.0e-34 150.6 157 52.2
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 1.3e-34 150.2 152 52.6
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 1.3e-34 150.2 152 52.6
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 1.3e-34 150.2 153 52.3
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 1.7e-34 149.8 149 54.4
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 1.7e-34 149.8 152 52.6
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 5.0e-34 148.3 147 53.7
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 5.0e-34 148.3 154 51.9
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 5.0e-34 148.3 151 55.6
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 8.6e-34 147.5 155 54.2
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 5.6e-33 144.8 160 51.9
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.2e-32 143.7 154 53.2
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 5.2e-31 138.3 152 45.4
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 1.2e-30 137.1 153 46.4
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 2.6e-30 136.0 135 54.8
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 3.4e-30 135.6 153 45.8
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 2.9e-29 132.5 148 48.6
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 7.0e-28 127.9 138 46.4
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.0e-26 124.0 119 57.1
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 2.3e-26 122.9 96 60.4
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 3.6e-24 115.5 155 42.6
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 4.4e-22 108.6 101 57.4
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 1.7e-21 106.7 91 58.2
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 7.0e-20 101.3 82 63.4
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 1.6e-19 100.1 130 40.0
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.5e-17 93.6 116 49.1
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 1.2e-16 90.5 86 53.5
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 4.7e-16 88.6 76 57.9
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 6.2e-16 88.2 111 45.9
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 1.7e-10 70.1 46 67.4
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.5e-09 66.2 44 68.2
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 3.4e-06 55.8 36 66.7


User provided reference genes

Program Settings