Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.1e-69 266.5 132 100.0
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.0e-64 250.0 132 94.7
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 1.4e-34 149.8 119 65.5
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 3.3e-31 138.7 104 71.2
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 4.8e-30 134.8 129 55.0
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 1.4e-29 133.3 123 58.5
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.2e-28 130.2 110 60.0
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 4.5e-28 128.3 132 53.0
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 7.7e-28 127.5 96 64.6
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 7.7e-28 127.5 110 58.2
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.0e-27 127.1 131 51.9
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 1.7e-27 126.3 104 62.5
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 2.9e-27 125.6 97 63.9
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 3.8e-27 125.2 123 56.1
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 3.8e-27 125.2 129 52.7
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 5.0e-27 124.8 80 70.0
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 6.5e-27 124.4 80 70.0
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 8.5e-27 124.0 117 58.1
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 1.1e-26 123.6 115 62.6
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 1.4e-26 123.2 96 63.5
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.4e-26 123.2 89 67.4
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 1.4e-26 123.2 127 53.5
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 2.5e-26 122.5 109 59.6
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 3.2e-26 122.1 109 59.6
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 4.2e-26 121.7 110 57.3
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 5.5e-26 121.3 74 75.7
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 5.5e-26 121.3 116 54.3
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 7.2e-26 120.9 104 62.5
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 7.2e-26 120.9 127 52.0
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 9.4e-26 120.6 103 60.2
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 9.4e-26 120.6 113 55.8
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 9.4e-26 120.6 121 55.4
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 9.4e-26 120.6 78 70.5
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 1.2e-25 120.2 95 63.2
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 1.2e-25 120.2 88 64.8
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 1.6e-25 119.8 115 60.0
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.6e-25 119.8 127 48.8
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 2.1e-25 119.4 101 59.4
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 2.1e-25 119.4 71 71.8
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 2.1e-25 119.4 114 57.9
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 2.7e-25 119.0 102 57.8
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 2.7e-25 119.0 111 55.0
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 3.6e-25 118.6 102 59.8
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 3.6e-25 118.6 108 57.4
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 3.6e-25 118.6 110 57.3
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 6.1e-25 117.9 113 57.5
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 6.1e-25 117.9 101 55.4
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 7.9e-25 117.5 99 62.6
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 7.9e-25 117.5 126 51.6
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 7.9e-25 117.5 70 74.3
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 7.9e-25 117.5 70 74.3
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 7.9e-25 117.5 116 56.0
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.0e-24 117.1 65 76.9
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.0e-24 117.1 103 55.3
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 1.0e-24 117.1 117 55.6
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 1.8e-24 116.3 101 56.4
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 1.8e-24 116.3 68 77.9
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 2.3e-24 115.9 118 54.2
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 2.3e-24 115.9 116 56.0
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 3.0e-24 115.5 118 55.1
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 3.0e-24 115.5 107 55.1
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 3.0e-24 115.5 115 52.2
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 3.0e-24 115.5 116 56.0
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 3.0e-24 115.5 116 56.0
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 3.9e-24 115.2 96 58.3
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 3.9e-24 115.2 91 62.6
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 3.9e-24 115.2 132 50.0
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 5.1e-24 114.8 61 80.3
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 6.7e-24 114.4 64 73.4
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 6.7e-24 114.4 103 58.3
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 8.8e-24 114.0 113 55.8
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 8.8e-24 114.0 98 54.1
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 8.8e-24 114.0 66 77.3
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 1.1e-23 113.6 108 56.5
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 1.1e-23 113.6 108 56.5
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 1.5e-23 113.2 73 72.6
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 2.6e-23 112.5 117 53.8
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 2.6e-23 112.5 120 52.5
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 3.3e-23 112.1 90 62.2
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 3.3e-23 112.1 89 60.7
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 3.3e-23 112.1 115 53.9
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 4.4e-23 111.7 106 53.8
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 5.7e-23 111.3 102 57.8
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 5.7e-23 111.3 72 68.1
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 9.7e-23 110.5 103 53.4
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 1.7e-22 109.8 96 58.3
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 2.2e-22 109.4 110 55.5
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 3.7e-22 108.6 98 57.1
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 4.8e-22 108.2 60 76.7
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 4.8e-22 108.2 106 53.8
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 3.1e-21 105.5 123 50.4
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 3.1e-21 105.5 94 57.4
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 4.1e-21 105.1 142 43.0
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 6.9e-21 104.4 94 54.3
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 9.1e-21 104.0 101 47.5
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 1.2e-20 103.6 94 55.3
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.2e-19 99.4 55 76.4
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 2.9e-19 99.0 55 74.5
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 3.2e-18 95.5 109 47.7
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 5.5e-18 94.7 59 67.8
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 2.1e-17 92.8 70 65.7
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 2.2e-14 82.8 55 65.5
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 1.9e-10 69.7 76 46.1


User provided reference genes

Program Settings