Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 0.0e+00 1327.4 646 100.0
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 0.0e+00 1146.3 661 87.3
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 8.8e-210 734.2 489 74.6
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 4.4e-185 652.1 600 59.2
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 9.8e-185 651.0 606 58.7
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 1.8e-183 646.7 455 70.3
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 7.0e-183 644.8 577 58.8
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 1.7e-181 640.2 456 69.7
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 1.9e-180 636.7 468 68.2
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 7.2e-180 634.8 553 60.0
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 1.8e-178 630.2 540 61.9
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 4.0e-178 629.0 592 57.6
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 1.3e-176 624.0 561 60.2
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 3.7e-176 622.5 549 59.4
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 4.1e-175 619.0 665 52.6
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 9.1e-175 617.8 671 53.4
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 2.7e-174 616.3 605 56.2
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 5.9e-174 615.1 583 56.9
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 5.0e-173 612.1 569 57.1
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 6.6e-173 611.7 591 56.7
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.1e-172 610.9 505 61.4
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 2.5e-172 609.8 483 64.6
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 5.6e-172 608.6 505 61.2
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.2e-171 607.4 487 64.1
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 2.1e-171 606.7 464 66.4
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 1.0e-170 604.4 574 57.8
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 3.4e-169 599.4 502 61.0
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 3.4e-169 599.4 542 58.9
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 3.7e-168 595.9 507 60.7
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 1.8e-167 593.6 529 58.8
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 9.2e-167 591.3 405 69.9
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.2e-166 590.9 418 69.4
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.2e-166 590.9 482 63.7
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.6e-166 590.5 527 60.2
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 4.6e-166 589.0 423 68.1
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 3.9e-165 585.9 456 64.3
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 3.3e-164 582.8 468 62.0
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 1.2e-163 580.9 585 53.8
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 1.0e-162 577.8 485 60.0
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.3e-162 576.6 421 65.6
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 3.1e-162 576.2 563 54.7
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 4.0e-162 575.9 564 55.9
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 6.8e-162 575.1 683 49.9
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 8.9e-162 574.7 578 54.3
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 4.4e-161 572.4 490 60.8
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 9.8e-161 571.2 455 63.3
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.3e-160 570.9 666 49.1
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 3.2e-159 566.2 467 63.2
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 3.2e-159 566.2 529 57.7
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 3.2e-159 566.2 540 56.1
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 1.6e-158 563.9 457 63.0
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 1.6e-158 563.9 447 63.5
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 4.6e-158 562.4 645 50.9
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 1.9e-156 557.0 537 55.5
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 1.6e-155 553.9 599 51.1
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.1e-155 553.5 461 61.6
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 2.8e-155 553.1 579 50.6
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 2.6e-153 546.6 431 64.3
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 2.6e-153 546.6 492 57.1
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 3.2e-151 539.7 438 62.6
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 2.1e-150 537.0 563 50.4
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 2.8e-147 526.6 491 55.6
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 8.1e-147 525.0 610 49.5
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 5.8e-145 518.8 526 53.2
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.9e-143 513.8 452 59.1
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 4.6e-142 509.2 420 59.5
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 4.4e-137 492.7 471 55.4
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 2.3e-125 453.8 364 62.1
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 2.2e-112 410.6 437 50.8
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 4.9e-112 409.5 443 47.6
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 1.1e-108 398.3 287 68.3
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 1.8e-101 374.4 272 65.8
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 4.6e-94 349.7 244 69.7
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 4.1e-82 310.1 416 48.1
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 7.2e-79 299.3 228 69.3
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 7.5e-76 289.3 308 54.2
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 4.8e-75 286.6 272 55.1
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 3.6e-70 270.4 362 42.8
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 2.8e-67 260.8 279 50.2
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 9.8e-52 209.1 192 56.8
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 5.0e-48 196.8 289 47.1
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 2.2e-35 154.8 141 57.4
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 3.2e-34 151.0 133 53.4
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.6e-33 148.7 512 27.5
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 3.8e-27 127.5 77 72.7
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 2.4e-26 124.8 133 51.1
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 2.3e-24 118.2 126 53.2
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 6.2e-22 110.2 113 54.9
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 4.3e-15 87.4 207 31.4
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 4.0e-13 80.9 57 64.9
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 1.3e-11 75.9 77 53.2
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 3.8e-11 74.3 171 33.3
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 8.4e-11 73.2 83 49.4
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 1.4e-10 72.4 178 31.5
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 1.2e-09 69.3 165 29.1
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 2.5e-07 61.6 58 53.4


User provided reference genes

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