Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014649 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.0e-84 316.6 154 100.0
AUR62014652 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.6e-77 292.7 154 92.9
AUR62044724 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.5e-67 259.6 135 94.1
EL10As6g23631 Beta vulgaris HOM05D004865 ORTHO05D005949 6.3e-58 227.6 155 70.3
EL10As6g23632 Beta vulgaris HOM05D004865 ORTHO05D005949 1.2e-56 223.4 155 69.0
AUR62012544 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.5e-54 215.7 148 73.0
AUR62044116 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.8e-44 183.0 87 94.3
AUR62012547 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.0e-39 167.2 145 62.1
AUR62012571 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.2e-35 153.7 98 70.4
Ah.06g181840 Amaranthus hybridus HOM05D004865 ORTHO05D005949 6.0e-32 141.4 154 47.4
AUR62012550 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.1e-29 132.9 149 51.7
AUR62014650 Chenopodium quinoa HOM05D004865 ORTHO05D005949 6.2e-29 131.3 96 69.8
Sc24g0002420 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.4e-27 125.6 155 43.9
ClCG11G000590 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.7e-26 123.2 145 46.2
Sed0022242 Sechium edule HOM05D004865 ORTHO05D005949 2.2e-26 122.9 145 44.1
Sc24g0002410 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.4e-25 120.2 155 43.9
ClCG03G011170 Citrullus lanatus HOM05D004865 ORTHO05D005949 4.2e-25 118.6 145 44.8
Sc09g0006330 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.4e-25 118.2 145 42.1
Prupe.2G116800 Prunus persica HOM05D004865 ORTHO05D005949 1.2e-24 117.1 150 43.3
Sc09g0006350 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.6e-24 116.7 157 42.0
ClCG11G000680 Citrullus lanatus HOM05D004865 ORTHO05D005949 3.5e-24 115.5 145 43.4
MD09G1162700 Malus domestica HOM05D004865 ORTHO05D005949 6.0e-24 114.8 145 44.8
Sc17g0004370 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.8e-24 114.4 146 38.4
ClCG03G011140 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.0e-23 114.0 145 43.4
Sc09g0006530 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.0e-23 114.0 144 41.7
MELO3C010083.2 Cucumis melo HOM05D004865 ORTHO05D005949 1.7e-23 113.2 145 42.8
MD09G1162600 Malus domestica HOM05D004865 ORTHO05D005949 1.7e-23 113.2 145 44.8
MD09G1162900 Malus domestica HOM05D004865 ORTHO05D005949 2.3e-23 112.8 141 44.7
Lj3A898T31 Lonicera japonica HOM05D004865 ORTHO05D005949 3.9e-23 112.1 145 44.1
MD17G1147700 Malus domestica HOM05D004865 ORTHO05D005949 3.9e-23 112.1 148 43.9
MD09G1163100 Malus domestica HOM05D004865 ORTHO05D005949 5.1e-23 111.7 147 42.9
Lj1P308T9 Lonicera japonica HOM05D004865 ORTHO05D005949 6.6e-23 111.3 124 43.5
Sc22g0001740 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.6e-23 111.3 147 42.9
Actinidia05767 Actinidia chinensis HOM05D004865 ORTHO05D005949 8.7e-23 110.9 152 41.4
CsaV3_1G044030 Cucumis sativus L. HOM05D004865 ORTHO05D005949 9.6e-22 107.5 145 40.7
Lj1P314T6 Lonicera japonica HOM05D004865 ORTHO05D005949 9.6e-22 107.5 126 42.1
Sc06g0005920 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.6e-21 105.5 144 39.6
Lj1P501T11 Lonicera japonica HOM05D004865 ORTHO05D005949 4.8e-21 105.1 126 40.5
Lj1P506T13 Lonicera japonica HOM05D004865 ORTHO05D005949 4.8e-21 105.1 126 40.5
Sc02g0003580 Simmondsia chinensis HOM05D004865 ORTHO05D005949 8.1e-21 104.4 145 40.0
Sc22g0001720 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.8e-20 103.2 140 42.1
Sc23g0005380 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.8e-20 103.2 131 42.0
Hma1.2p1_0543F.1_g175180 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 2.4e-20 102.8 153 39.9
Hma1.2p1_3336F.1_g335335 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 2.4e-20 102.8 153 39.9
Lj1P506T10 Lonicera japonica HOM05D004865 ORTHO05D005949 2.4e-20 102.8 126 40.5
Lj1P515T6 Lonicera japonica HOM05D004865 ORTHO05D005949 2.4e-20 102.8 126 40.5
MD05G1102400 Malus domestica HOM05D004865 ORTHO05D005949 2.4e-20 102.8 143 44.8
Sc22g0001710 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.4e-20 102.8 157 38.2
Sc22g0001760 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.9e-20 101.3 146 38.4
Sc22g0001730 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.2e-19 100.5 147 38.1
Sc09g0006340 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.5e-19 100.1 143 41.3
Actinidia30932 Actinidia chinensis HOM05D004865 ORTHO05D005949 7.6e-19 97.8 152 40.8
Lj6P373T4 Lonicera japonica HOM05D004865 ORTHO05D005949 1.3e-18 97.1 134 39.6
Hma1.2p1_1768F.1_g301530 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.7e-18 96.7 145 38.6
Actinidia30931 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.4e-17 93.6 152 39.5
Lj6P378T3 Lonicera japonica HOM05D004865 ORTHO05D005949 1.9e-17 93.2 134 37.3
SGA_v2.0_scaffold11G05644 Striga asiatica HOM05D004865 ORTHO05D005949 2.4e-17 92.8 143 38.5
Lj6P379T11 Lonicera japonica HOM05D004865 ORTHO05D005949 3.2e-17 92.4 134 36.6
MD17G1148100 Malus domestica HOM05D004865 ORTHO05D005949 3.2e-17 92.4 147 40.1
MD17G1148200 Malus domestica HOM05D004865 ORTHO05D005949 3.2e-17 92.4 147 40.1
Prupe.1G577300 Prunus persica HOM05D004865 ORTHO05D005949 5.4e-17 91.7 105 47.6
Ah.14g087230 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.6e-16 90.1 150 36.7
Lj6P371T8 Lonicera japonica HOM05D004865 ORTHO05D005949 1.6e-16 90.1 134 35.8
CSS0028314 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 2.1e-16 89.7 156 36.5
AUR62031151 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.1e-16 89.7 147 32.7
AUR62036568 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.1e-16 89.7 147 33.3
Duzib052G0039 Durio zibethinus HOM05D004865 ORTHO05D005949 2.7e-16 89.4 135 40.0
Sc16g0002940 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.6e-16 88.6 111 42.3
Sc24g0002440 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.6e-16 88.6 87 46.0
Os04g0308500 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 6.0e-16 88.2 145 35.2
Os04g0310100 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 6.0e-16 88.2 145 35.2
Sc16g0002960 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.9e-16 87.8 78 48.7
Sc22g0001750 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.9e-16 87.8 148 35.1
FAN22G1472 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.7e-15 86.7 135 39.3
Sed0001554 Sechium edule HOM05D004865 ORTHO05D034719 1.7e-15 86.7 142 38.7
Ah.14g087250 Amaranthus hybridus HOM05D004865 ORTHO05D005949 3.0e-15 85.9 147 34.0
EL10Ac8g20499 Beta vulgaris HOM05D004865 ORTHO05D005949 3.0e-15 85.9 148 34.5
Duzib212G1045 Durio zibethinus HOM05D004865 ORTHO05D005949 3.9e-15 85.5 141 35.5
DCAR_016015 Daucus carota HOM05D004865 ORTHO05D005949 5.1e-15 85.1 147 33.3
Ah.14g087240 Amaranthus hybridus HOM05D004865 ORTHO05D005949 6.6e-15 84.7 140 34.3
Gohir.A10G138700 Gossypium hirsutum HOM05D004865 ORTHO05D005949 6.6e-15 84.7 144 33.3
SGA_v2.0_scaffold163G38046 Striga asiatica HOM05D004865 ORTHO05D005949 6.6e-15 84.7 146 35.6
Gohir.D10G128100 Gossypium hirsutum HOM05D004865 ORTHO05D005949 1.5e-14 83.6 144 32.6
Gorai.011G141300 Gossypium raimondii HOM05D004865 ORTHO05D005949 1.5e-14 83.6 144 32.6
FAN09G4882 Fragaria x ananassa HOM05D004865 ORTHO05D005949 3.3e-14 82.4 106 41.5
CSS0032746 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 4.3e-14 82.0 155 38.1
SGA_v2.0_scaffold105G30447 Striga asiatica HOM05D004865 ORTHO05D005949 4.3e-14 82.0 149 32.9
AUR62014648 Chenopodium quinoa HOM05D004865 ORTHO05D005949 9.6e-14 80.9 67 67.2
DCAR_015955 Daucus carota HOM05D004865 ORTHO05D005949 9.6e-14 80.9 143 35.7
Sed0006015 Sechium edule HOM05D004865 ORTHO05D034719 1.3e-13 80.5 146 34.9
FvH4_6g36010 Fragaria vesca HOM05D004865 ORTHO05D005949 1.6e-13 80.1 111 41.4
FAN02G0162 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.6e-13 80.1 106 40.6
AUR62031152 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.8e-13 79.3 142 36.6
ECA233G1731 Erigeron canadensis HOM05D004865 ORTHO05D005949 3.6e-13 79.0 114 40.4
FAN14G5541 Fragaria x ananassa HOM05D004865 ORTHO05D005949 3.6e-13 79.0 88 46.6
DCAR_015954 Daucus carota HOM05D004865 ORTHO05D005949 4.8e-13 78.6 140 32.1
DCAR_016016 Daucus carota HOM05D004865 ORTHO05D005949 6.2e-13 78.2 143 35.0
AUR62036569 Chenopodium quinoa HOM05D004865 ORTHO05D005949 8.1e-13 77.8 142 36.6
MELO3C031484.2 Cucumis melo HOM05D004865 ORTHO05D005949 8.1e-13 77.8 137 38.0
AUR62027396 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.4e-12 77.0 109 38.5
Lj6P371T11 Lonicera japonica HOM05D004865 ORTHO05D005949 1.4e-12 77.0 93 40.9
SGA_v2.0_scaffold11G05649 Striga asiatica HOM05D004865 ORTHO05D005949 1.4e-12 77.0 109 37.6
HanXRQChr14g0437021 Helianthus annuus HOM05D000041 ORTHO05D000452 1.8e-12 76.6 82 42.7
FAN14G3467 Fragaria x ananassa HOM05D004865 ORTHO05D005949 4.0e-12 75.5 88 44.3
Cre07.g321800 Chlamydomonas reinhardtii HOM05D004865 ORTHO05D005949 5.3e-12 75.1 146 31.5
Lj6C375T0 Lonicera japonica HOM05D004865 ORTHO05D005949 9.0e-12 74.3 112 34.8
ECA233G0690 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.5e-11 73.6 106 34.9
EL10Ac6g13634 Beta vulgaris HOM05D004865 ORTHO05D005949 2.0e-11 73.2 108 37.0
Lsat_1_v5_gn_8_2701 Lactuca sativa HOM05D000041 ORTHO05D000452 3.4e-11 72.4 109 33.0
MD17G1148000 Malus domestica HOM05D004865 ORTHO05D005949 3.4e-11 72.4 150 35.3
Lsat_1_v5_gn_6_87560 Lactuca sativa HOM05D004865 ORTHO05D005949 4.5e-11 72.0 95 40.0
ClCG11G011710 Citrullus lanatus HOM05D004865 ORTHO05D034719 7.6e-11 71.2 133 38.3
Zm00001eb137370 Zea mays HOM05D004865 ORTHO05D005949 9.9e-11 70.9 144 31.2
CSS0027528 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 1.7e-10 70.1 157 34.4
AUR62027395 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.2e-10 69.7 128 37.5
Zm00001eb137430 Zea mays HOM05D004865 ORTHO05D005949 2.2e-10 69.7 148 32.4
ECA233G0596 Erigeron canadensis HOM05D004865 ORTHO05D000001 6.4e-10 68.2 125 32.8
Sc23g0005400 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.4e-10 68.2 134 34.3
Zm00001eb137410 Zea mays HOM05D004865 ORTHO05D005949 8.4e-10 67.8 145 33.8
Ah.14g087270 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.1e-09 67.4 97 38.1
HanXRQChr14g0461501 Helianthus annuus HOM05D004865 ORTHO05D005949 3.2e-09 65.9 110 35.5
EL10Ac8g20500 Beta vulgaris HOM05D004865 ORTHO05D005949 5.5e-09 65.1 130 32.3
CSS0005385 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 9.3e-09 64.3 150 31.3
ECA233G6014 Erigeron canadensis HOM05D004865 ORTHO05D005949 9.3e-09 64.3 110 36.4
Sed0017379 Sechium edule HOM05D004865 ORTHO05D005949 9.3e-09 64.3 124 33.1
ECA233G2698 Erigeron canadensis HOM05D004865 ORTHO05D005949 1.6e-08 63.5 91 37.4
ECA233G5215 Erigeron canadensis HOM05D004865 ORTHO05D005949 1.6e-08 63.5 78 42.3
HanXRQChr17g0555801 Helianthus annuus HOM05D004865 ORTHO05D005949 2.7e-08 62.8 127 34.6
HanXRQChr17g0555831 Helianthus annuus HOM05D004865 ORTHO05D005949 2.7e-08 62.8 127 34.6
Sed0020964 Sechium edule HOM05D004865 ORTHO05D005949 4.6e-08 62.0 105 37.1
Zm00001eb137380 Zea mays HOM05D004865 ORTHO05D005949 4.6e-08 62.0 106 37.7
EL10Ac6g13635 Beta vulgaris HOM05D004865 ORTHO05D005949 6.0e-08 61.6 130 30.8
HanXRQChr03g0060861 Helianthus annuus HOM05D004865 ORTHO05D005949 1.3e-07 60.5 89 34.8
HanXRQChr03g0060851 Helianthus annuus HOM05D004865 ORTHO05D005949 1.8e-07 60.1 89 34.8
CsaV3_4G030090 Cucumis sativus L. HOM05D004865 ORTHO05D005949 6.7e-07 58.2 65 38.5
HanXRQChr03g0085651 Helianthus annuus HOM05D004865 ORTHO05D005949 6.7e-07 58.2 101 36.6
HanXRQChr13g0416741 Helianthus annuus HOM05D004865 ORTHO05D005949 8.7e-07 57.8 63 42.9
HanXRQChr13g0416751 Helianthus annuus HOM05D004865 ORTHO05D005949 2.5e-06 56.2 63 42.9
HanXRQChr13g0416771 Helianthus annuus HOM05D004865 ORTHO05D005949 2.5e-06 56.2 63 42.9
Sed0001119 Sechium edule HOM05D004865 ORTHO05D005949 7.4e-06 54.7 110 31.8


User provided reference genes

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