Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 6.1e-132 474.2 240 100.0
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 1.5e-98 363.2 186 97.3
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 1.7e-89 333.2 186 86.0
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 1.4e-88 330.1 230 72.6
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 3.2e-88 328.9 183 85.2
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 4.1e-88 328.6 183 86.3
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 5.4e-88 328.2 183 84.2
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 7.0e-88 327.8 182 85.2
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 1.6e-87 326.6 183 85.2
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 1.6e-87 326.6 237 70.0
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 2.0e-87 326.2 251 70.9
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 2.7e-87 325.9 183 84.2
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 3.5e-87 325.5 183 84.2
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 3.5e-87 325.5 185 82.7
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 4.6e-87 325.1 185 82.7
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 4.6e-87 325.1 183 83.1
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 4.6e-87 325.1 186 83.3
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 5.9e-87 324.7 185 83.2
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 7.8e-87 324.3 183 84.2
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 1.0e-86 323.9 182 84.6
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 1.0e-86 323.9 275 65.8
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 1.7e-86 323.2 186 82.3
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 1.7e-86 323.2 183 82.5
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 3.9e-86 322.0 185 81.1
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 6.6e-86 321.2 263 64.6
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 8.6e-86 320.9 186 82.3
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 8.6e-86 320.9 206 75.7
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 1.1e-85 320.5 183 83.6
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 1.1e-85 320.5 194 80.4
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 1.9e-85 319.7 183 84.2
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 1.9e-85 319.7 183 82.5
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 1.9e-85 319.7 183 82.5
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 1.9e-85 319.7 183 82.5
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 1.9e-85 319.7 183 82.5
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 2.5e-85 319.3 183 82.0
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 2.5e-85 319.3 183 82.5
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 4.3e-85 318.5 183 83.1
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 4.3e-85 318.5 184 83.2
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 4.3e-85 318.5 238 67.2
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 4.3e-85 318.5 183 83.1
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 5.6e-85 318.2 184 82.6
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 7.3e-85 317.8 183 81.4
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 9.5e-85 317.4 183 83.1
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 1.2e-84 317.0 183 83.6
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 1.6e-84 316.6 183 80.9
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 2.1e-84 316.2 184 83.2
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 2.8e-84 315.8 183 80.9
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 2.8e-84 315.8 183 80.9
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 2.8e-84 315.8 183 80.9
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 4.7e-84 315.1 226 69.9
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 4.7e-84 315.1 186 81.2
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 1.4e-83 313.5 218 72.5
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 1.8e-83 313.2 183 80.3
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 1.8e-83 313.2 183 81.4
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 2.3e-83 312.8 183 82.5
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 3.1e-83 312.4 184 81.0
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 3.1e-83 312.4 185 82.2
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 4.0e-83 312.0 185 81.1
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 8.9e-83 310.8 183 80.3
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 8.9e-83 310.8 183 81.4
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 1.5e-82 310.1 183 80.3
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 2.0e-82 309.7 184 79.9
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 2.6e-82 309.3 184 79.3
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 2.6e-82 309.3 183 79.8
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 4.4e-82 308.5 183 81.4
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 7.5e-82 307.8 187 80.2
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.7e-81 306.6 235 67.2
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.7e-81 306.6 235 67.2
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 6.4e-81 304.7 183 79.8
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 8.3e-81 304.3 183 79.8
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 1.1e-80 303.9 186 79.6
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 1.4e-80 303.5 183 78.7
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 1.4e-80 303.5 239 64.4
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 2.4e-80 302.8 183 79.8
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 7.0e-80 301.2 183 78.7
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 1.2e-79 300.4 183 79.2
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 2.7e-79 299.3 204 73.5
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 4.6e-79 298.5 186 77.4
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 4.6e-79 298.5 186 77.4
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 4.6e-79 298.5 186 77.4
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 4.6e-79 298.5 186 77.4
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 4.6e-79 298.5 186 77.4
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 6.0e-79 298.1 186 77.4
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 7.8e-79 297.7 169 83.4
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 3.9e-78 295.4 212 70.8
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.1e-77 293.9 183 77.6
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 1.6e-76 290.0 181 78.5
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 3.6e-76 288.9 177 79.7
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 6.2e-76 288.1 169 79.9
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 2.3e-75 286.2 247 60.3
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 6.4e-73 278.1 171 77.2
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 1.4e-72 276.9 167 77.8
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 6.0e-71 271.6 152 83.6
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 1.3e-70 270.4 159 80.5
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 8.6e-70 267.7 152 82.9
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 4.7e-68 261.9 181 68.5
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 4.0e-67 258.8 181 71.3
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 8.9e-67 257.7 168 73.8
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 2.6e-66 256.1 183 67.2
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 2.2e-65 253.1 183 68.3
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 3.5e-63 245.7 183 67.8
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 1.3e-62 243.8 182 62.6
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 6.9e-59 231.5 126 84.9
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 2.9e-57 226.1 126 83.3
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 3.3e-53 212.6 128 78.9
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 6.2e-52 208.4 121 81.0
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 2.9e-49 199.5 107 86.0
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 5.1e-46 188.7 171 59.6
PRCOL_00000779 Prasinoderma coloniale HOM05D006042 ORTHO05D007658 6.2e-44 181.8 184 50.0
MCO16G088 Micromonas commoda HOM05D006042 ORTHO05D007658 2.2e-41 173.3 181 47.5
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 4.2e-40 169.1 121 70.2
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 1.0e-38 164.5 169 53.3
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 6.7e-38 161.8 184 52.2
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 7.4e-37 158.3 97 75.3
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 4.8e-36 155.6 97 74.2
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 6.5e-33 145.2 80 82.5
unitig_0.g9 Utricularia gibba HOM05D006042 ORTHO05D007658 7.1e-32 141.7 80 80.0
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 3.0e-30 136.3 104 71.2
Cpa.g.sc179.23 Carica papaya HOM05D006042 ORTHO05D007658 5.1e-30 135.6 89 75.3
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 1.9e-29 133.7 164 48.2
GSVIVG01027526001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.5e-26 124.0 78 74.4
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 2.0e-26 123.6 127 52.8
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 1.0e-25 121.3 74 74.3
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 3.1e-19 99.8 234 34.6
Sabra17G0093400 Salix brachista HOM05D006042 ORTHO05D007658 9.1e-19 98.2 90 60.0
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 4.5e-18 95.9 75 62.7
BcaC05g29172 Brassica carinata HOM05D006042 ORTHO05D032368 3.9e-14 82.8 50 72.0
C02p54890 Brassica napus HOM05D006042 ORTHO05D032368 5.1e-14 82.4 51 70.6
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 5.7e-13 79.0 55 67.3
CARHR262580 Cardamine hirsuta HOM05D006042 ORTHO05D007658 4.8e-12 75.9 83 53.0
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 4.8e-12 75.9 47 70.2
Peaxi162Scf00104g00074 Petunia axillaris HOM05D006042 ORTHO05D007658 1.4e-11 74.3 48 70.8
VMungo0464G0819 Vigna mungo HOM05D006042 ORTHO05D007658 5.5e-08 62.4 47 61.7


User provided reference genes

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