Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014501 Chenopodium quinoa HOM05D002879 ORTHO05D002930 7.7e-26 120.6 108 100.0
AUR62035549 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.6e-23 112.8 109 98.2
AUR62038034 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.6e-23 112.8 109 98.2
AUR62038037 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.7e-22 107.5 90 97.8
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.8e-17 91.7 87 89.7
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.8e-17 91.7 87 89.7
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.8e-17 91.7 87 89.7
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 3.3e-13 78.6 105 70.5
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 2.8e-12 75.5 87 67.8
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.1e-11 73.6 87 77.0
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.9e-09 65.5 87 71.3
Ah.05g177050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 5.0e-09 64.7 86 76.7
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.5e-08 62.4 49 63.3
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 2.5e-08 62.4 49 63.3
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 3.2e-08 62.0 49 63.3
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.2e-08 62.0 49 63.3
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 7.2e-08 60.8 80 73.8
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.2e-07 60.1 46 60.9
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 1.6e-07 59.7 45 62.2
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 1.6e-07 59.7 85 65.9
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.1e-07 59.3 45 64.4
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.1e-07 59.3 45 64.4
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.1e-07 59.3 45 64.4
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 2.1e-07 59.3 43 67.4
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.1e-07 59.3 87 69.0
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.7e-07 58.9 47 61.7
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 3.6e-07 58.5 43 65.1
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 4.7e-07 58.2 48 60.4
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 4.7e-07 58.2 43 62.8
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.7e-07 58.2 45 62.2
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 4.7e-07 58.2 45 62.2
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 4.7e-07 58.2 85 71.8
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 6.1e-07 57.8 87 65.5
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.1e-07 57.8 47 63.8
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 6.1e-07 57.8 44 63.6
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 6.1e-07 57.8 43 65.1
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.0e-07 57.4 43 62.8
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 1.0e-06 57.0 48 58.3
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.0e-06 57.0 49 59.2
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.0e-06 57.0 48 60.4
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 1.4e-06 56.6 49 57.1
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.4e-06 56.6 47 61.7
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 1.4e-06 56.6 47 59.6
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.8e-06 56.2 48 58.3
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.8e-06 56.2 48 58.3
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.8e-06 56.2 47 59.6
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.8e-06 56.2 87 62.1
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 2.3e-06 55.8 47 59.6
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.3e-06 55.8 40 67.5
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.3e-06 55.8 47 59.6
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.3e-06 55.8 45 62.2
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.3e-06 55.8 44 61.4
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.3e-06 55.8 43 62.8
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.0e-06 55.5 48 58.3
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 3.0e-06 55.5 81 72.8
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 3.0e-06 55.5 81 45.7
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 4.0e-06 55.1 48 56.2
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.0e-06 55.1 43 62.8
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.0e-06 55.1 45 57.8
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.0e-06 55.1 45 57.8
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 4.0e-06 55.1 35 71.4
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.2e-06 54.7 43 60.5
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.7e-06 54.3 48 56.2
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.7e-06 54.3 87 63.2


User provided reference genes

Program Settings