Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 4.6e-80 301.2 156 100.0
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.6e-40 169.9 91 97.8
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 5.1e-39 164.9 91 94.5
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 2.3e-31 139.4 93 79.6
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 2.3e-31 139.4 86 82.6
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 6.7e-31 137.9 83 84.3
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 8.8e-31 137.5 84 82.1
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 8.8e-31 137.5 83 83.1
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 4.3e-30 135.2 83 84.3
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 4.3e-30 135.2 86 82.6
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 5.7e-30 134.8 83 81.9
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 7.4e-30 134.4 85 81.2
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 7.4e-30 134.4 83 81.9
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 9.7e-30 134.0 79 86.1
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 9.7e-30 134.0 80 86.2
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 9.7e-30 134.0 80 86.2
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 1.3e-29 133.7 84 81.0
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 1.7e-29 133.3 83 81.9
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 1.7e-29 133.3 84 81.0
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 1.7e-29 133.3 80 85.0
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 1.7e-29 133.3 80 85.0
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 2.2e-29 132.9 84 78.6
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 2.2e-29 132.9 87 81.6
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 6.3e-29 131.3 90 75.6
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 8.2e-29 131.0 80 85.0
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 8.2e-29 131.0 82 79.3
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 8.2e-29 131.0 80 83.8
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 1.1e-28 130.6 80 85.0
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.4e-28 130.2 83 79.5
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.8e-28 129.8 89 74.2
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.8e-28 129.8 84 81.0
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 1.8e-28 129.8 91 73.6
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 3.1e-28 129.0 89 74.2
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 3.1e-28 129.0 89 74.2
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 3.1e-28 129.0 89 74.2
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 3.1e-28 129.0 89 74.2
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 3.1e-28 129.0 89 74.2
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 3.1e-28 129.0 89 74.2
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 3.1e-28 129.0 80 80.0
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 3.1e-28 129.0 82 80.5
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 3.1e-28 129.0 87 78.2
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 3.1e-28 129.0 87 78.2
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 3.1e-28 129.0 82 80.5
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 4.1e-28 128.6 85 76.5
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 4.1e-28 128.6 87 73.6
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 5.3e-28 128.3 88 76.1
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 5.3e-28 128.3 85 74.1
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 5.3e-28 128.3 85 80.0
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 5.3e-28 128.3 84 78.6
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 5.3e-28 128.3 87 73.6
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 5.3e-28 128.3 85 77.6
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 6.9e-28 127.9 83 77.1
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 6.9e-28 127.9 83 77.1
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 9.1e-28 127.5 80 82.5
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 1.2e-27 127.1 83 79.5
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.2e-27 127.1 85 74.1
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 1.5e-27 126.7 89 73.0
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 1.5e-27 126.7 87 72.4
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 1.5e-27 126.7 87 72.4
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.5e-27 126.7 87 72.4
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 2.0e-27 126.3 86 75.6
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 2.6e-27 125.9 83 74.7
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 2.6e-27 125.9 85 76.5
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 3.4e-27 125.6 82 79.3
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 3.4e-27 125.6 81 77.8
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 4.5e-27 125.2 88 72.7
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 4.5e-27 125.2 81 80.2
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 4.5e-27 125.2 83 81.9
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 5.9e-27 124.8 89 71.9
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 7.7e-27 124.4 92 68.5
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 7.7e-27 124.4 83 77.1
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 7.7e-27 124.4 83 75.9
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 7.7e-27 124.4 88 71.6
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.0e-26 124.0 89 68.5
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 1.0e-26 124.0 84 75.0
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 1.0e-26 124.0 82 78.0
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 1.3e-26 123.6 89 71.9
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 2.2e-26 122.9 88 70.5
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 2.9e-26 122.5 85 71.8
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 2.9e-26 122.5 91 70.3
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 2.9e-26 122.5 80 78.8
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 5.0e-26 121.7 81 76.5
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 5.0e-26 121.7 91 74.7
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 6.5e-26 121.3 84 71.4
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 8.5e-26 120.9 84 73.8
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 8.5e-26 120.9 83 80.7
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.1e-25 120.6 85 72.9
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 1.1e-25 120.6 81 75.3
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 1.4e-25 120.2 88 72.7
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 1.9e-25 119.8 83 74.7
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 2.5e-25 119.4 89 67.4
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 3.2e-25 119.0 89 71.9
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 3.2e-25 119.0 91 69.2
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 7.2e-25 117.9 82 73.2
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 7.2e-25 117.9 87 69.0
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 1.2e-24 117.1 82 73.2
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 2.7e-24 115.9 81 74.1
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 3.6e-24 115.5 81 74.1
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 1.4e-23 113.6 85 68.2
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 3.9e-23 112.1 81 72.8
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 6.7e-23 111.3 82 75.6
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 2.2e-21 106.3 104 59.6
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 4.8e-21 105.1 83 66.3
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.5e-19 100.1 58 86.2
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.7e-16 89.4 52 80.8
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 6.1e-16 88.2 68 64.7
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.4e-15 87.0 123 43.1
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 1.8e-15 86.7 126 49.2
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 3.9e-15 85.5 53 79.2
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.1e-12 77.4 58 74.1
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.4e-12 77.0 57 70.2
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 5.3e-12 75.1 82 53.7
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 7.0e-12 74.7 87 57.5
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 1.6e-11 73.6 106 43.4
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 1.3e-10 70.5 44 77.3
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 1.8e-07 60.1 93 41.9
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 3.0e-07 59.3 50 60.0
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 1.2e-06 57.4 36 83.3


User provided reference genes

Program Settings