Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014349 Chenopodium quinoa HOM05D003319 ORTHO05D003739 9.7e-287 989.6 539 100.0
AUR62019092 Chenopodium quinoa HOM05D003319 ORTHO05D003739 2.1e-257 892.1 591 84.4
EL10Ac1g00993 Beta vulgaris HOM05D003319 ORTHO05D003739 7.4e-146 521.5 609 55.5
EL10Ac3g06093 Beta vulgaris HOM05D003319 ORTHO05D003739 2.9e-89 333.6 610 44.8
Hund04947 Selenicereus undatus HOM05D003319 ORTHO05D003739 2.9e-81 307.0 620 41.1
AUR62002401 Chenopodium quinoa HOM05D003319 ORTHO05D003739 1.6e-79 301.2 542 43.7
AUR62023790 Chenopodium quinoa HOM05D003319 ORTHO05D003739 9.0e-75 285.4 542 42.6
Sc26g0002970 Simmondsia chinensis HOM05D003319 ORTHO05D003739 6.9e-67 259.2 568 39.6
Dinv42609 Davidia involucrata HOM05D003319 ORTHO05D003739 5.5e-64 249.6 492 40.4
Hund17284 Selenicereus undatus HOM05D003319 ORTHO05D003739 6.7e-62 242.7 501 42.5
vmacro04648 Vaccinium macrocarpon HOM05D003319 ORTHO05D003739 5.8e-58 229.6 424 42.7
Rhsim07G0212100 Rhododendron simsii HOM05D003319 ORTHO05D003739 8.4e-57 225.7 533 37.0
GSVIVG01009184001 Vitis vinifera HOM05D003319 ORTHO05D003739 2.7e-55 220.7 523 37.3
CANSAT35G1730 Cannabis sativa HOM05D003319 ORTHO05D003739 4.6e-55 219.9 484 39.0
TAR628G1108 Trochodendron aralioides HOM05D003319 ORTHO05D003739 1.3e-54 218.4 613 34.9
Lj4A737G58 Lonicera japonica HOM05D003319 ORTHO05D003739 6.7e-54 216.1 458 40.4
Eucgr.F02154 Eucalyptus grandis HOM05D003319 ORTHO05D003739 4.3e-53 213.4 472 38.1
Ciclev10000622m.g Citrus clementina HOM05D003319 ORTHO05D003739 1.3e-52 211.8 458 38.4
Nn1g05581 Nelumbo nucifera HOM05D003319 ORTHO05D003739 4.8e-52 209.9 506 38.1
Nitab4.5_0001607g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 6.3e-52 209.5 469 38.2
TAR376G1177 Trochodendron aralioides HOM05D003319 ORTHO05D003739 6.3e-52 209.5 527 37.0
Potri.002G106500 Populus trichocarpa HOM05D003319 ORTHO05D003739 2.0e-50 204.5 444 37.8
Ah.07g202760 Amaranthus hybridus HOM05D003319 ORTHO05D003739 2.6e-50 204.1 497 39.8
CAN.G806.11 Capsicum annuum HOM05D003319 ORTHO05D003739 4.5e-50 203.4 461 36.7
Hma1.2p1_0010F.1_g006630 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 2.2e-49 201.1 507 36.1
Peaxi162Scf00454g00323 Petunia axillaris HOM05D003319 ORTHO05D003739 3.8e-49 200.3 457 37.6
Solyc12g087970.2 Solanum lycopersicum HOM05D003319 ORTHO05D003739 1.4e-48 198.4 497 35.6
Sopen12g030000 Solanum pennellii HOM05D003319 ORTHO05D003739 2.5e-48 197.6 510 36.1
CiPaw.07G165000 Carya illinoinensis HOM05D003319 ORTHO05D003739 3.2e-48 197.2 447 36.5
Cc10_g15920 Coffea canephora HOM05D003319 ORTHO05D003739 5.5e-48 196.4 593 32.9
Nitab4.5_0000354g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 7.2e-48 196.1 535 36.1
Manes.18G058300 Manihot esculenta HOM05D003319 ORTHO05D003739 1.2e-47 195.3 602 33.4
Sabra02G0083800 Salix brachista HOM05D003319 ORTHO05D003739 1.0e-46 192.2 492 35.6
PGR042G0823 Punica granatum HOM05D003319 ORTHO05D003739 2.3e-46 191.0 442 38.0
Peaxi162Scf00160g01038 Petunia axillaris HOM05D003319 ORTHO05D003739 3.9e-46 190.3 417 39.1
Cfa009865 Carpinus fangiana HOM05D003319 ORTHO05D003739 8.8e-46 189.1 456 38.6
Thecc.08G071400 Theobroma cacao HOM05D003319 ORTHO05D003739 3.3e-45 187.2 474 36.3
QL09p017848 Quercus lobata HOM05D003319 ORTHO05D003739 1.7e-44 184.9 637 31.7
Manes.02G144600 Manihot esculenta HOM05D003319 ORTHO05D003739 2.2e-44 184.5 492 35.6
MD08G1198900 Malus domestica HOM05D003319 ORTHO05D003739 1.1e-43 182.2 460 36.3
Nitab4.5_0000131g0210 Nicotiana tabacum HOM05D003319 ORTHO05D003739 1.1e-43 182.2 420 37.4
Aqoxy5G01378 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 1.8e-43 181.4 533 34.5
Prupe.1G532700 Prunus persica HOM05D003319 ORTHO05D003739 2.4e-43 181.0 438 35.8
Atru.chr13.1006 Acer truncatum HOM05D003319 ORTHO05D003739 6.9e-43 179.5 543 33.7
CDE05G3064 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 9.1e-43 179.1 439 36.0
Cfa013800 Carpinus fangiana HOM05D003319 ORTHO05D003739 2.0e-42 177.9 532 33.3
CiPaw.08G055800 Carya illinoinensis HOM05D003319 ORTHO05D003739 2.0e-42 177.9 564 33.3
Haze_22463 Corylus avellana HOM05D003319 ORTHO05D003739 3.4e-42 177.2 463 35.0
CsaV3_2G030210 Cucumis sativus L. HOM05D003319 ORTHO05D003739 3.8e-41 173.7 542 32.5
MSTRG.11807 Avicennia marina HOM05D003319 ORTHO05D003739 6.5e-41 172.9 492 32.5
PSO170G3999 Papaver somniferum HOM05D003319 ORTHO05D003739 1.4e-40 171.8 446 34.8
PSO210G3859 Papaver somniferum HOM05D003319 ORTHO05D003739 2.5e-40 171.0 443 35.2
ClCG11G014590 Citrullus lanatus HOM05D003319 ORTHO05D003739 3.2e-40 170.6 459 32.5
Haze_23237 Corylus avellana HOM05D003319 ORTHO05D003739 3.2e-40 170.6 317 41.6
Gohir.D01G114100 Gossypium hirsutum HOM05D003319 ORTHO05D003739 3.2e-40 170.6 488 34.8
Solyc04g076360.4 Solanum lycopersicum HOM05D003319 ORTHO05D003739 3.2e-40 170.6 515 32.6
Lsat_1_v5_gn_9_74001 Lactuca sativa HOM05D003319 ORTHO05D003739 5.5e-40 169.9 389 36.2
MELO3C003521.2 Cucumis melo HOM05D003319 ORTHO05D003739 2.7e-39 167.5 525 31.0
Gohir.A01G126500 Gossypium hirsutum HOM05D003319 ORTHO05D003739 3.6e-39 167.2 555 34.6
MBI16_g19592_MAGBIO Magnolia biondii HOM05D003319 ORTHO05D003739 4.7e-39 166.8 516 33.7
PGR031G0455 Punica granatum HOM05D003319 ORTHO05D003739 6.1e-39 166.4 584 32.4
ATR0582G130 Amborella trichopoda HOM05D003319 ORTHO05D003739 7.9e-39 166.0 437 33.9
CAN.G475.23 Capsicum annuum HOM05D003319 ORTHO05D003739 7.9e-39 166.0 501 33.1
Prupe.1G532600 Prunus persica HOM05D003319 ORTHO05D003739 1.0e-38 165.6 487 35.3
Gorai.002G139000 Gossypium raimondii HOM05D003319 ORTHO05D003739 3.9e-38 163.7 556 33.8
Actinidia19627 Actinidia chinensis HOM05D003319 ORTHO05D003739 5.1e-38 163.3 383 37.3
CDE11G0791 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 5.1e-38 163.3 570 30.9
Nitab4.5_0005913g0020 Nicotiana tabacum HOM05D003319 ORTHO05D003739 6.7e-38 162.9 504 32.9
Duzib093G0230 Durio zibethinus HOM05D003319 ORTHO05D003739 1.1e-37 162.2 333 39.6
SGA_v2.0_scaffold193G40665 Striga asiatica HOM05D003319 ORTHO05D003739 1.5e-37 161.8 439 33.5
CsaV3_3G048000 Cucumis sativus L. HOM05D003319 ORTHO05D003739 3.3e-37 160.6 374 34.8
Sed0024254 Sechium edule HOM05D003319 ORTHO05D003739 3.3e-37 160.6 495 32.7
CiPaw.14G112200 Carya illinoinensis HOM05D003319 ORTHO05D003739 1.3e-36 158.7 620 30.8
QL01p017023 Quercus lobata HOM05D003319 ORTHO05D003739 1.3e-36 158.7 708 29.2
Sopen00g008100 Solanum pennellii HOM05D003319 ORTHO05D003739 1.3e-36 158.7 507 32.1
Migut.A00432 Erythranthe guttata HOM05D003319 ORTHO05D003739 2.8e-36 157.5 520 33.7
ECA232G2539 Erigeron canadensis HOM05D001083 ORTHO05D001637 4.8e-36 156.8 504 34.3
RcHm_v2.0_Chr7g0235501 Rosa chinensis HOM05D003319 ORTHO05D003739 1.8e-35 154.8 442 33.0
Sed0025417 Sechium edule HOM05D003319 ORTHO05D003739 3.1e-35 154.1 388 34.0
MELO3C011083.2 Cucumis melo HOM05D003319 ORTHO05D003739 4.1e-35 153.7 579 30.6
HPP92_016140 Vanilla planifolia HOM05D003319 ORTHO05D003739 2.6e-34 151.0 512 31.8
ClCG08G011640 Citrullus lanatus HOM05D003319 ORTHO05D003739 3.5e-34 150.6 593 29.7
PGSC0003DMG400009342 Solanum tuberosum HOM05D003319 ORTHO05D003739 1.3e-33 148.7 421 34.9
TWI56G0998 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 1.7e-33 148.3 636 29.1
Glyma.04G095300 Glycine max HOM05D003319 ORTHO05D003739 3.8e-33 147.1 414 31.9
Oeu018565.2 Olea europaea HOM05D003319 ORTHO05D003739 3.8e-33 147.1 555 30.8
TWI36G0459 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 3.8e-33 147.1 607 29.5
Actinidia19629 Actinidia chinensis HOM05D003319 ORTHO05D003739 6.5e-33 146.4 306 38.6
arahy.Tifrunner.gnm1.ann1.53Z6YZ Arachis hypogaea HOM05D003319 ORTHO05D003739 1.9e-32 144.8 409 31.5
HanXRQChr05g0163341 Helianthus annuus HOM05D003319 ORTHO05D003739 4.2e-32 143.7 354 38.4
VMungo1309G1101 Vigna mungo HOM05D003319 ORTHO05D003739 4.2e-32 143.7 416 31.0
Duzib041G0541 Durio zibethinus HOM05D003319 ORTHO05D003739 7.2e-32 142.9 555 32.4
Cpa.g.sc21.26 Carica papaya HOM05D003319 ORTHO05D003739 1.2e-31 142.1 521 31.1
HanXRQChr15g0484821 Helianthus annuus HOM05D003319 ORTHO05D003739 2.7e-31 141.0 332 35.2
THA.LOC104816794 Tarenaya hassleriana HOM05D003319 ORTHO05D003739 3.6e-31 140.6 572 29.4
PSO478G0452 Papaver somniferum HOM05D003319 ORTHO05D003739 1.4e-30 138.7 418 34.9
Lj1g0027025 Lotus japonicus HOM05D003319 ORTHO05D003739 2.3e-30 137.9 333 33.3
AT1G58220 Arabidopsis thaliana HOM05D003319 ORTHO05D003739 4.0e-30 137.1 386 33.9
FAN13G1335 Fragaria x ananassa HOM05D003319 ORTHO05D003739 4.0e-30 137.1 453 32.7
Sp2g05390 Schrenkiella parvula HOM05D003319 ORTHO05D003739 6.7e-30 136.3 390 34.1
FvH4_5g34820 Fragaria vesca HOM05D003319 ORTHO05D003739 2.0e-29 134.8 536 31.0
CSS0018207 Camellia sinensis var. sinensis HOM05D003319 ORTHO05D003739 3.3e-29 134.0 243 41.6
CARHR053790 Cardamine hirsuta HOM05D003319 ORTHO05D003739 3.3e-29 134.0 323 35.6
Lsat_1_v5_gn_6_104940 Lactuca sativa HOM05D003319 ORTHO05D003739 4.4e-29 133.7 498 30.5
FAN04G1055 Fragaria x ananassa HOM05D003319 ORTHO05D003739 7.4e-29 132.9 547 31.1
AL2G18190 Arabidopsis lyrata HOM05D003319 ORTHO05D003739 1.3e-28 132.1 362 35.1
DCAR_019315 Daucus carota HOM05D003319 ORTHO05D003739 1.7e-28 131.7 500 30.4
ECA246G1786 Erigeron canadensis HOM05D003319 ORTHO05D003739 3.7e-28 130.6 352 35.8
Aa31LG1G5280 Aethionema arabicum HOM05D003319 ORTHO05D003739 6.3e-28 129.8 398 32.7
Carub.0002s0638 Capsella rubella HOM05D003319 ORTHO05D003739 8.2e-28 129.4 363 33.1
DCAR_012853 Daucus carota HOM05D003319 ORTHO05D003739 1.8e-27 128.3 310 33.9
Thhalv10024079m.g Eutrema salsugineum HOM05D003319 ORTHO05D003739 4.1e-27 127.1 390 33.3
Phvul.009G036300 Phaseolus vulgaris HOM05D003319 ORTHO05D003739 7.0e-27 126.3 538 27.3
CAN.G193.10 Capsicum annuum HOM05D003319 ORTHO05D003739 4.5e-26 123.6 226 40.7
Sed0014936 Sechium edule HOM05D003319 ORTHO05D003739 1.3e-25 122.1 453 29.8
A01p28300 Brassica napus HOM05D003319 ORTHO05D003739 1.7e-25 121.7 387 31.3
BraA01t02959Z Brassica rapa HOM05D003319 ORTHO05D003739 1.7e-25 121.7 387 31.3
Dinv44863 Davidia involucrata HOM05D001049 ORTHO05D001986 2.2e-25 121.3 171 48.5
Aa31LG2G10920 Aethionema arabicum HOM05D003319 ORTHO05D003739 2.9e-25 120.9 381 31.8
MD15G1386000 Malus domestica HOM05D003319 ORTHO05D003739 5.0e-25 120.2 240 40.0
Sp1g08300 Schrenkiella parvula HOM05D003319 ORTHO05D003739 5.0e-25 120.2 381 32.8
COL.COLO4_35252 Corchorus olitorius HOM05D001049 ORTHO05D001986 8.5e-25 119.4 256 41.8
BcaC09g49499 Brassica carinata HOM05D003319 ORTHO05D003739 1.1e-24 119.0 390 30.8
C01p35850 Brassica napus HOM05D003319 ORTHO05D003739 1.1e-24 119.0 390 30.8
BolC1t03546H Brassica oleracea HOM05D003319 ORTHO05D003739 1.1e-24 119.0 390 30.8
Migut.F01437 Erythranthe guttata HOM05D003319 ORTHO05D003739 1.1e-24 119.0 555 27.7
BcaB04g20193 Brassica carinata HOM05D003319 ORTHO05D003739 1.5e-24 118.6 400 30.8
Lalb_Chr23g0270031 Lupinus albus HOM05D003319 ORTHO05D003739 1.9e-24 118.2 435 29.4
A09p18510 Brassica napus HOM05D003319 ORTHO05D003739 3.2e-24 117.5 385 32.5
Lalb_Chr11g0064951 Lupinus albus HOM05D003319 ORTHO05D003739 5.5e-24 116.7 461 29.9
C09p23120 Brassica napus HOM05D003319 ORTHO05D003739 1.2e-23 115.5 427 30.9
BcaC04g22121 Brassica carinata HOM05D003319 ORTHO05D003739 1.6e-23 115.2 386 31.6
AL1G20260 Arabidopsis lyrata HOM05D003319 ORTHO05D003739 2.1e-23 114.8 301 36.2
SalBow4G2315 Salvia bowleyana HOM05D003319 ORTHO05D003739 2.1e-23 114.8 636 25.0
Aqoxy5G01379 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 2.7e-23 114.4 195 43.6
BraA09t37477Z Brassica rapa HOM05D003319 ORTHO05D003739 2.7e-23 114.4 387 32.3
CARHR009680 Cardamine hirsuta HOM05D003319 ORTHO05D003739 1.0e-22 112.5 280 34.3
BolC9t55230H Brassica oleracea HOM05D003319 ORTHO05D003739 1.4e-22 112.1 428 31.1
Psat5g049040 Pisum sativum HOM05D003319 ORTHO05D003739 1.8e-22 111.7 394 28.4
Os02g0551400 Oryza sativa ssp. japonica HOM05D003319 ORTHO05D003739 2.3e-22 111.3 348 31.6
Ca_23436_v3 Cicer arietinum L. HOM05D003319 ORTHO05D003739 5.2e-22 110.2 362 31.5
Medtr8g024690 Medicago truncatula HOM05D003319 ORTHO05D003739 8.8e-22 109.4 304 29.3
PSO478G2921 Papaver somniferum HOM05D003319 ORTHO05D003739 1.5e-21 108.6 512 28.3
PSO478G3694 Papaver somniferum HOM05D003319 ORTHO05D003739 2.6e-21 107.8 460 30.0
FAN08G0387 Fragaria x ananassa HOM05D003319 ORTHO05D003739 3.4e-21 107.5 479 29.0
arahy.Tifrunner.gnm1.ann1.J3DRUP Arachis hypogaea HOM05D003319 ORTHO05D003739 5.7e-21 106.7 389 29.8
AT1G09710 Arabidopsis thaliana HOM05D003319 ORTHO05D003739 7.5e-21 106.3 478 28.7
Sabra05G0119500 Salix brachista HOM05D003319 ORTHO05D003739 1.7e-20 105.1 776 24.6
FAN18G0012 Fragaria x ananassa HOM05D003319 ORTHO05D003739 2.2e-20 104.8 589 28.2
PSO478G0048 Papaver somniferum HOM05D003319 ORTHO05D003739 2.2e-20 104.8 508 28.0
unitig_32.g10947 Utricularia gibba HOM05D003319 ORTHO05D003739 4.8e-20 103.6 508 27.0
TPR.G6339 Trifolium pratense HOM05D003319 ORTHO05D003739 6.3e-20 103.2 339 29.5
Hma1.2p1_0616F.1_g189970 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 8.3e-20 102.8 131 49.6
Medtr3g100180 Medicago truncatula HOM05D003319 ORTHO05D003739 1.1e-19 102.4 395 27.8
arahy.Tifrunner.gnm1.ann1.ET429J Arachis hypogaea HOM05D003319 ORTHO05D003739 2.4e-19 101.3 490 25.3
Lalb_Chr08g0242551 Lupinus albus HOM05D003319 ORTHO05D003739 3.1e-19 100.9 440 29.1
arahy.Tifrunner.gnm1.ann1.S3SE83 Arachis hypogaea HOM05D003319 ORTHO05D003739 7.0e-19 99.8 351 30.2
Carub.0001s0905 Capsella rubella HOM05D003319 ORTHO05D003739 1.6e-18 98.6 332 31.0
Ca_29526_v3 Cicer arietinum L. HOM05D003319 ORTHO05D003739 2.7e-18 97.8 383 29.8
C05p07790 Brassica napus HOM05D003319 ORTHO05D003739 3.5e-18 97.4 485 27.8
BolC5t29530H Brassica oleracea HOM05D003319 ORTHO05D003739 3.5e-18 97.4 497 28.4
Phvul.008G182100 Phaseolus vulgaris HOM05D003319 ORTHO05D003739 5.9e-18 96.7 249 30.5
Glyma.02G214600 Glycine max HOM05D003319 ORTHO05D003739 1.0e-17 95.9 251 29.1
BraA06t23850Z Brassica rapa HOM05D003319 ORTHO05D003739 2.2e-17 94.7 601 25.3
Zm00001eb243450 Zea mays HOM05D003319 ORTHO05D003739 2.9e-17 94.4 480 27.5
Lj4A88T36 Lonicera japonica HOM05D003319 ORTHO05D003739 1.1e-16 92.4 163 41.1
PSO782G3079 Papaver somniferum HOM05D003319 ORTHO05D003739 2.5e-16 91.3 261 32.2
Glyma.06G097100 Glycine max HOM05D003319 ORTHO05D003739 3.2e-16 90.9 293 32.1
A06p06390 Brassica napus HOM05D003319 ORTHO05D003739 8.0e-15 86.3 493 25.4
Psat2g065280 Pisum sativum HOM05D003319 ORTHO05D003739 2.3e-14 84.7 216 31.5
VMungo0647G1715 Vigna mungo HOM05D003319 ORTHO05D003739 5.2e-14 83.6 221 32.6
SEGI_24455 Sequoiadendron giganteum HOM05D003319 ORTHO05D003739 1.2e-13 82.4 445 25.8
arahy.Tifrunner.gnm1.ann1.30MVJR Arachis hypogaea HOM05D003319 ORTHO05D003739 3.4e-13 80.9 141 41.1
MD15G1385800 Malus domestica HOM05D003319 ORTHO05D003739 3.4e-13 80.9 198 34.8
Zm00001eb181960 Zea mays HOM05D003319 ORTHO05D003739 3.4e-13 80.9 325 28.9
PSO782G3353 Papaver somniferum HOM05D003319 ORTHO05D003739 1.1e-11 75.9 282 27.7
CBR_g9135 Chara braunii HOM05D003319 ORTHO05D003739 4.1e-11 73.9 151 37.1
Pp3c8_16730 Physcomitrium patens HOM05D003319 ORTHO05D003739 2.0e-10 71.6 185 31.4
Mapoly0014s0193 Marchantia polymorpha HOM05D003319 ORTHO05D003739 2.7e-10 71.2 506 25.1
CSS0012387 Camellia sinensis var. sinensis HOM05D003319 ORTHO05D003739 2.9e-09 67.8 261 31.0
PGSC0003DMG400002048 Solanum tuberosum HOM05D003319 ORTHO05D003739 8.6e-09 66.2 242 33.5
Lj4A717T32 Lonicera japonica HOM05D003319 ORTHO05D003739 1.1e-08 65.9 94 52.1
Oeu040388.1 Olea europaea HOM05D003319 ORTHO05D003739 5.6e-08 63.5 106 42.5
SHI20380 Sapria himalayana HOM05D003319 ORTHO05D003739 1.6e-07 62.0 62 51.6
FvH4_4g17970 Fragaria vesca HOM05D003319 ORTHO05D003739 4.7e-07 60.5 135 35.6
Lj4A717G27 Lonicera japonica HOM05D003319 ORTHO05D003739 2.3e-06 58.2 216 30.6
Hma1.2p1_0125F.1_g058840 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 8.9e-06 56.2 212 33.0


User provided reference genes

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