Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 3.8e-193 677.9 329 100.0
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.5e-192 675.2 329 99.4
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.7e-172 609.4 325 87.4
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 1.4e-166 589.7 327 84.1
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.0e-153 547.0 328 78.7
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 5.2e-150 534.6 326 78.2
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 6.8e-150 534.3 326 77.0
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 4.4e-149 531.6 326 76.7
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 1.7e-148 529.6 326 76.1
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 4.9e-148 528.1 328 75.3
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 8.3e-148 527.3 320 77.2
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 8.3e-148 527.3 320 77.2
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.4e-147 526.6 326 76.1
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 5.4e-147 524.6 327 74.6
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 9.2e-147 523.9 326 75.5
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 9.2e-147 523.9 326 76.7
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 1.2e-146 523.5 327 74.6
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.2e-146 523.5 326 76.7
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 2.0e-146 522.7 326 74.8
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 4.5e-146 521.5 328 74.4
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 4.5e-146 521.5 327 74.6
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 7.8e-146 520.8 326 74.8
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 1.0e-145 520.4 326 75.2
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 1.3e-145 520.0 326 76.7
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.3e-145 520.0 325 75.4
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 2.3e-145 519.2 328 74.7
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 2.9e-145 518.8 328 75.3
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 5.0e-145 518.1 326 74.8
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 6.6e-145 517.7 327 73.4
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 6.6e-145 517.7 326 74.8
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 1.1e-144 516.9 327 75.5
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 1.1e-144 516.9 327 73.4
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 3.3e-144 515.4 327 73.1
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 5.6e-144 514.6 325 73.5
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 7.3e-144 514.2 326 75.2
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 7.3e-144 514.2 327 73.7
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 7.3e-144 514.2 326 73.6
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 2.1e-143 512.7 329 74.5
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 2.8e-143 512.3 329 73.9
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 8.0e-143 510.8 327 72.2
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 8.0e-143 510.8 326 73.6
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.0e-142 510.4 326 73.6
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 1.8e-142 509.6 329 74.8
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.8e-142 509.6 327 74.0
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 2.3e-142 509.2 329 75.4
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 2.3e-142 509.2 326 72.7
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 5.2e-142 508.1 319 73.0
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 5.2e-142 508.1 327 71.6
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 8.9e-142 507.3 328 73.5
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.2e-141 506.9 326 73.6
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.5e-141 506.5 327 73.7
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.5e-141 506.5 327 71.9
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 1.5e-141 506.5 328 73.2
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 2.0e-141 506.1 329 74.5
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 2.0e-141 506.1 317 75.1
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 5.7e-141 504.6 328 72.3
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 7.5e-141 504.2 324 73.5
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 4.9e-140 501.5 329 72.9
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 8.3e-140 500.7 345 71.3
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 5.4e-139 498.0 336 72.0
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.2e-138 496.9 326 71.2
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 2.0e-138 496.1 326 73.3
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 3.5e-138 495.4 333 72.1
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 3.5e-138 495.4 326 73.6
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 1.0e-137 493.8 339 71.4
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 2.3e-137 492.7 328 72.6
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.1e-136 490.3 329 72.0
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 1.5e-136 490.0 319 72.4
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.5e-136 490.0 308 74.0
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 3.6e-135 485.3 318 72.0
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 3.6e-135 485.3 327 70.0
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 6.2e-135 484.6 335 68.7
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 4.0e-134 481.9 311 74.0
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 2.6e-133 479.2 326 70.6
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 3.4e-133 478.8 303 73.3
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 7.5e-133 477.6 319 71.8
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 1.7e-132 476.5 298 73.8
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 1.1e-131 473.8 314 72.0
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.4e-131 472.6 303 72.3
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 5.4e-131 471.5 316 69.3
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 2.7e-130 469.2 303 71.6
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 6.0e-130 468.0 326 68.1
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 4.7e-127 458.4 326 66.9
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 2.0e-125 453.0 312 70.2
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.6e-122 443.4 326 66.6
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.3e-121 440.3 319 64.3
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 2.5e-120 436.0 249 80.7
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.6e-119 433.3 326 64.7
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 1.4e-118 430.3 324 65.1
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.4e-118 429.5 324 60.5
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 4.0e-118 428.7 324 60.5
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.2e-117 427.2 250 78.4
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 4.4e-117 425.2 250 79.2
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 2.9e-116 422.5 250 78.4
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 2.9e-116 422.5 329 59.0
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 4.9e-116 421.8 323 64.1
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 6.6e-113 411.4 315 61.6
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 2.8e-111 406.0 309 59.2
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.1e-107 394.0 316 58.5
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 1.9e-107 393.3 278 67.6
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.3e-103 380.6 249 71.1
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 6.2e-103 378.3 326 59.2
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.4e-102 377.1 236 71.6
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.3e-95 354.0 218 77.1
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 1.9e-91 340.1 196 80.6
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 9.0e-86 321.2 311 51.8
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 1.4e-65 254.2 169 67.5
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 2.4e-62 243.4 144 80.6
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 4.8e-55 219.2 130 80.8
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 7.7e-45 185.3 280 35.7
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 1.7e-44 184.1 304 38.5
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 1.2e-42 177.9 145 55.9
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.1e-38 164.9 304 34.2
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 1.3e-36 157.9 116 64.7
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.8e-31 140.2 108 68.5
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 1.7e-28 131.0 85 64.7
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 2.9e-28 130.2 78 79.5
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 3.8e-28 129.8 131 51.9
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.0e-20 105.1 65 64.6
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.9e-19 100.9 55 80.0
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 8.0e-18 95.5 78 56.4
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 9.8e-16 88.6 73 60.3
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 5.2e-09 66.2 64 51.6
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 4.4e-08 63.2 36 72.2
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 4.9e-07 59.7 62 50.0
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 4.1e-06 56.6 41 63.4


User provided reference genes

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