Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.9e-224 781.2 401 100.0
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 7.7e-180 634.0 464 72.8
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 1.0e-152 543.9 405 70.9
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 6.6e-131 471.5 312 73.7
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 3.6e-129 465.7 370 64.9
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 1.4e-128 463.8 314 72.0
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.3e-128 463.0 404 61.9
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 8.9e-128 461.1 385 62.6
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 2.0e-127 459.9 328 69.5
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.3e-126 457.2 388 61.9
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 2.9e-126 456.1 372 64.5
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 6.4e-126 454.9 399 61.4
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.1e-125 454.1 324 70.4
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.4e-125 453.8 414 59.2
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.9e-125 453.4 379 60.2
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 4.1e-125 452.2 318 69.2
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 7.0e-125 451.4 364 64.3
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.2e-124 450.7 320 68.4
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 2.0e-124 449.9 314 69.4
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 3.5e-124 449.1 316 67.7
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 6.0e-124 448.4 320 67.8
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 1.3e-123 447.2 329 67.8
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 1.7e-123 446.8 411 57.7
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 3.0e-123 446.0 347 65.1
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 8.6e-123 444.5 323 65.9
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.3e-122 442.6 319 65.8
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 9.5e-122 441.0 386 61.4
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 1.2e-121 440.7 319 66.5
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 2.1e-121 439.9 414 56.0
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 3.6e-121 439.1 413 57.9
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 4.7e-121 438.7 396 57.8
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 4.7e-121 438.7 328 65.9
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.2e-121 438.3 319 66.1
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 8.1e-121 438.0 344 66.0
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.1e-120 437.6 401 58.4
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 1.1e-120 437.6 314 66.9
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.3e-120 436.4 314 66.9
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 4.0e-120 435.6 403 57.1
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 6.8e-120 434.9 383 61.1
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 6.8e-120 434.9 402 58.7
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 8.9e-120 434.5 374 59.1
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.5e-119 433.7 386 60.1
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 5.8e-119 431.8 359 60.7
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 5.8e-119 431.8 460 53.5
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 7.5e-119 431.4 324 65.4
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 7.5e-119 431.4 394 58.9
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 9.8e-119 431.0 354 63.6
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 2.9e-118 429.5 410 57.1
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 2.9e-118 429.5 308 67.5
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.1e-117 427.6 378 59.5
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.1e-117 427.6 336 64.6
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 2.4e-117 426.4 334 65.0
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 4.1e-117 425.6 313 66.5
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 5.4e-117 425.2 334 63.8
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 7.1e-117 424.9 361 61.2
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 2.1e-116 423.3 382 59.2
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 2.1e-116 423.3 381 58.5
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 4.6e-116 422.2 384 57.0
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 1.3e-115 420.6 314 62.7
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.7e-115 420.2 405 56.8
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 5.1e-115 418.7 314 66.9
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 6.6e-115 418.3 364 60.7
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 8.6e-115 417.9 407 53.3
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.1e-114 417.5 372 58.3
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 1.5e-114 417.2 334 62.9
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 5.6e-114 415.2 304 67.1
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.3e-114 414.8 366 59.3
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 3.6e-113 412.5 308 64.6
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 1.4e-112 410.6 304 65.8
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 2.3e-112 409.8 383 57.2
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 5.2e-112 408.7 324 62.3
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 1.5e-111 407.1 398 55.3
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 2.6e-111 406.4 257 75.1
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 3.4e-111 406.0 393 57.0
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.8e-111 405.2 316 63.0
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.8e-111 405.2 321 62.0
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 2.9e-110 402.9 411 52.6
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 6.4e-110 401.7 312 63.1
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.4e-110 401.7 325 61.2
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 6.4e-110 401.7 329 63.2
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.1e-109 401.0 335 61.5
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 4.1e-109 399.1 304 64.1
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 5.4e-109 398.7 307 63.2
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.7e-108 396.4 337 58.8
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 6.0e-108 395.2 376 56.1
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 1.0e-107 394.4 290 66.9
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.6e-107 391.3 329 59.6
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 2.5e-106 389.8 294 64.3
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 6.9e-104 381.7 286 67.5
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 7.1e-101 371.7 303 60.7
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.1e-96 356.3 273 66.3
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 3.4e-95 352.8 247 69.2
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.9e-93 347.1 268 64.9
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.3e-91 340.9 336 56.2
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.3e-91 340.9 430 45.8
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 2.8e-89 333.2 282 59.9
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.2e-84 317.8 337 51.0
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.1e-82 311.2 319 55.5
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 2.3e-75 287.0 192 70.3
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 9.0e-72 275.0 242 59.1
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 1.9e-69 267.3 364 46.4
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 4.6e-68 262.7 293 45.7
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 4.6e-68 262.7 302 51.0
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 1.8e-67 260.8 210 62.4
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 1.3e-65 254.6 182 64.8
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 6.1e-60 235.7 287 47.4
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 6.5e-54 215.7 262 48.9
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.6e-52 209.9 154 64.9
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 2.0e-50 204.1 147 63.3
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.6e-50 203.8 251 45.4
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 5.7e-50 202.6 191 53.9
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 2.4e-48 197.2 289 38.4
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 6.7e-43 179.1 195 50.3
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.1e-40 171.8 185 50.8
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 7.7e-39 165.6 199 46.2
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 3.5e-31 140.2 111 58.6
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 5.9e-31 139.4 261 37.9
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 1.3e-30 138.3 175 46.3
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 4.9e-25 119.8 311 29.3
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.4e-24 118.2 89 56.2
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 2.4e-24 117.5 184 40.2
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 5.4e-24 116.3 87 62.1
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 5.4e-24 116.3 191 38.7
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.2e-23 115.2 196 39.3
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 1.6e-23 114.8 78 70.5
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 5.9e-23 112.8 321 28.3
Mapoly0003s0267 Marchantia polymorpha HOM05D032652 ORTHO05D005510 3.6e-20 103.6 303 28.7
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 6.1e-20 102.8 153 41.8
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.0e-19 102.1 68 70.6
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.4e-19 101.7 202 34.7
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 5.2e-19 99.8 164 34.8
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 1.2e-18 98.6 62 72.6
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 7.5e-18 95.9 67 67.2
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 1.7e-17 94.7 61 73.8
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 1.8e-16 91.3 100 48.0
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 2.7e-15 87.4 70 62.9
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.3e-14 84.3 255 25.9
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 1.9e-13 81.3 107 47.7
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 1.2e-12 78.6 271 26.6
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 1.6e-12 78.2 58 65.5
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 1.6e-12 78.2 271 26.6
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 1.8e-11 74.7 260 26.2
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 3.1e-11 73.9 322 23.6
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.6e-10 70.9 241 25.7
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 3.4e-10 70.5 61 57.4
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 7.5e-10 69.3 302 24.8
MCO15G091 Micromonas commoda HOM05D036318 ORTHO05D005510 1.0e-06 58.9 339 23.0


User provided reference genes

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