Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 0.0e+00 1644.8 855 100.0
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 0.0e+00 1513.4 855 92.5
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 0.0e+00 1286.6 861 79.3
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 0.0e+00 1227.2 858 75.9
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 7.6e-286 987.3 916 59.3
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 5.3e-271 937.9 829 61.2
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.3e-266 923.3 861 58.4
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 5.7e-265 917.9 861 58.3
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 6.5e-261 904.4 862 57.7
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 2.5e-260 902.5 766 61.9
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 4.2e-260 901.7 826 58.1
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 9.4e-260 900.6 774 61.4
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 1.2e-259 900.2 823 58.7
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 1.0e-258 897.1 865 56.4
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 1.4e-258 896.7 875 57.4
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 1.4e-258 896.7 772 61.3
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 3.3e-257 892.1 820 58.8
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 5.7e-257 891.3 769 60.1
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 7.4e-257 891.0 772 61.9
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 3.7e-256 888.6 824 57.8
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 4.8e-256 888.3 877 56.2
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.8e-255 886.3 774 59.8
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 6.9e-255 884.4 772 61.4
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.5e-254 883.2 823 57.6
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 8.5e-253 877.5 747 61.8
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 1.0e-250 870.5 790 58.1
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.8e-250 869.8 776 59.9
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 5.1e-250 868.2 765 59.2
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.0e-249 866.3 772 60.2
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 4.4e-249 865.1 824 57.5
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 9.1e-247 857.4 763 60.0
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.0e-245 854.0 850 55.4
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 2.2e-245 852.8 773 59.9
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 9.4e-244 847.4 762 60.4
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 2.7e-243 845.9 767 58.4
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 8.0e-243 844.3 751 59.8
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 1.0e-242 844.0 771 58.5
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 3.0e-242 842.4 769 58.5
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 6.7e-242 841.3 749 61.9
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 2.0e-241 839.7 751 59.5
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 7.4e-241 837.8 847 53.7
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 1.1e-239 833.9 760 58.4
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.4e-239 833.6 873 53.4
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 1.8e-239 833.2 780 57.2
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 5.3e-239 831.6 823 56.0
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 9.1e-239 830.9 794 56.8
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 2.2e-237 826.2 808 55.9
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 3.8e-237 825.5 760 58.6
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 1.0e-234 817.4 769 57.1
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 1.0e-234 817.4 788 56.9
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 1.7e-232 810.1 875 53.6
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.5e-228 797.0 768 57.0
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.5e-228 797.0 830 53.9
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 6.1e-227 791.6 756 56.9
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 1.4e-226 790.4 716 59.1
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 1.4e-226 790.4 808 54.1
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 2.3e-226 789.6 763 56.4
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 1.5e-225 786.9 781 55.3
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.5e-225 786.9 782 55.1
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 4.4e-225 785.4 749 56.6
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 4.4e-225 785.4 757 56.8
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 5.7e-225 785.0 782 55.0
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 6.3e-224 781.6 757 56.1
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 1.4e-223 780.4 752 56.2
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 3.1e-223 779.2 814 53.4
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 4.1e-223 778.9 757 56.4
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 7.0e-223 778.1 776 54.9
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 9.1e-223 777.7 757 56.3
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 7.2e-220 768.1 757 56.0
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 9.5e-220 767.7 816 53.1
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 2.1e-219 766.5 778 54.2
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 3.6e-219 765.8 757 55.6
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 2.3e-218 763.1 784 53.8
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 4.4e-217 758.8 755 55.2
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 7.0e-215 751.5 822 51.9
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 2.0e-214 750.0 763 55.0
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 3.5e-214 749.2 771 53.4
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 1.3e-213 747.3 843 50.1
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 1.3e-208 730.7 810 53.5
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 6.4e-208 728.4 807 52.5
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.9e-200 703.0 684 55.1
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 3.3e-196 689.5 656 57.0
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 8.3e-192 674.9 782 47.8
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 1.1e-191 674.5 766 50.0
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 7.8e-190 668.3 767 49.0
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 1.5e-188 664.1 686 52.9
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 6.2e-171 605.5 466 66.7
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 1.4e-167 594.3 551 57.5
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 8.7e-165 585.1 767 44.6
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.4e-162 577.8 582 56.0
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 6.0e-158 562.4 467 63.2
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 3.0e-157 560.1 590 53.6
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 3.1e-154 550.1 683 47.1
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 2.2e-152 543.9 457 59.3
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 3.0e-149 533.5 557 52.6
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 7.4e-148 528.9 772 44.7
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.7e-144 517.7 576 52.3
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 2.7e-142 510.4 639 47.9
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 8.8e-141 505.4 466 56.7
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 2.5e-140 503.8 449 58.8
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 2.7e-118 430.6 871 36.7
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 1.1e-111 408.7 791 35.4
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 2.2e-91 341.3 833 32.1
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 4.6e-81 307.0 272 61.0
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 1.9e-79 301.6 417 41.2
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.1e-74 283.9 219 67.6
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 2.5e-71 274.6 614 33.2
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 2.4e-66 258.1 196 66.3
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 1.3e-62 245.7 187 64.7
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 2.1e-62 245.0 247 52.2
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.7e-59 235.3 242 53.7
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 6.9e-53 213.4 748 26.7
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 2.4e-50 204.9 845 26.2
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 7.7e-20 103.6 136 46.3
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 2.1e-17 95.5 144 41.7
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 8.2e-14 83.6 89 51.7
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 3.5e-12 78.2 113 45.1
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 4.5e-12 77.8 160 37.5
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 2.7e-09 68.6 117 36.8


User provided reference genes

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