Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014145 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.0e-95 352.4 178 100.0
AUR62022065 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.0e-67 260.4 262 58.8
AUR62022064 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.5e-66 256.5 262 58.0
AUR62022063 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.8e-64 249.6 262 56.9
AUR62043488 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.8e-63 244.6 300 51.0
AUR62019338 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.4e-61 240.0 262 55.7
AUR62015356 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.4e-61 239.2 262 55.7
AUR62009237 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.5e-58 229.9 282 51.4
AUR62038614 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.3e-58 228.4 261 53.3
AUR62018675 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.2e-57 224.6 352 43.5
AUR62036964 Chenopodium quinoa HOM05D000030 ORTHO05D000378 6.2e-57 224.6 277 51.3
AUR62042655 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.0e-56 221.9 352 42.9
AUR62024092 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.9e-56 221.1 254 53.9
AUR62017515 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.7e-51 204.1 247 52.6
AUR62014093 Chenopodium quinoa HOM05D000030 ORTHO05D000031 1.1e-48 197.2 315 44.1
AUR62027899 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.5e-47 193.4 263 49.4
AUR62021656 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.0e-47 193.0 217 54.4
AUR62003532 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.1e-45 187.2 254 48.4
AUR62034972 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-44 183.7 112 83.9
AUR62026250 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.6e-44 181.8 324 40.1
AUR62042794 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.6e-44 181.8 112 83.0
AUR62033361 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.8e-43 179.9 112 82.1
AUR62019693 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.3e-43 179.5 112 82.1
AUR62000362 Chenopodium quinoa HOM05D000030 ORTHO05D000031 2.1e-41 172.9 106 84.0
AUR62009913 Chenopodium quinoa HOM05D000030 ORTHO05D001296 1.5e-31 140.2 84 84.5
AUR62039044 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-31 139.0 80 85.0
AUR62044689 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.0e-30 137.5 84 83.3
AUR62040057 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.3e-30 137.1 92 78.3
AUR62033927 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.0e-27 127.5 86 79.1
AUR62039043 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.7e-25 119.0 66 90.9
AUR62014095 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.6e-23 112.8 67 85.1
AUR62020595 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.3e-22 110.5 67 83.6
AUR62033589 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.2e-22 109.8 86 67.4
AUR62040058 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.0e-19 100.9 66 81.8
AUR62019692 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.8e-19 97.8 66 78.8
AUR62042793 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.4e-18 95.5 65 78.5
AUR62044688 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.4e-18 95.5 65 78.5
EL10Ac9g21081 Beta vulgaris HOM05D000030 ORTHO05D000031 5.7e-18 95.1 112 48.2
AUR62024748 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.3e-17 94.0 66 75.8
AUR62035014 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.8e-17 92.0 79 60.8
AUR62028432 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.2e-17 91.3 66 71.2
EL10Ac4g08641 Beta vulgaris HOM05D000030 ORTHO05D000031 9.1e-16 87.8 262 28.2
EL10Ac3g05892 Beta vulgaris HOM05D000030 ORTHO05D000031 5.0e-14 82.0 213 33.3
AUR62005292 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 117 42.7
AUR62006345 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 117 42.7
AUR62008567 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 117 42.7
AUR62009290 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 117 42.7
AUR62014844 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 117 42.7
AUR62020942 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 117 42.7
AUR62026652 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 117 42.7
AUR62030133 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 117 42.7
AUR62033000 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 118 41.5
AUR62037898 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 114 41.2
AUR62041304 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 117 42.7
AUR62043967 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-12 77.4 199 31.7
AUR62036807 Chenopodium quinoa HOM05D000613 ORTHO05D000009 2.1e-12 76.6 117 41.9
AUR62039034 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.1e-12 76.6 114 41.2
AUR62000273 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62005066 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62005670 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62007966 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62008490 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62008672 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62012400 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62018823 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62019746 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62020940 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62023653 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62028290 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62028297 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62029342 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62034868 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62034869 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62040292 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62044442 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62044443 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-12 75.9 117 41.9
AUR62043114 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.7e-12 75.5 114 40.4
AUR62027787 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.0e-12 74.7 117 41.9
AUR62038468 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.0e-11 74.3 117 41.0
AUR62038471 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.0e-11 74.3 117 41.0
AUR62017454 Chenopodium quinoa HOM05D000030 ORTHO05D000031 1.4e-11 73.9 108 45.4
AUR62016800 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.0e-11 72.8 116 41.4
AUR62038437 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.9e-11 72.4 113 41.6
AUR62033590 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.7e-11 71.6 42 85.7
EL10Ac4g09204 Beta vulgaris HOM05D000030 ORTHO05D000031 2.6e-10 69.7 208 28.8
AUR62035214 Chenopodium quinoa HOM05D000030 ORTHO05D000023 2.6e-10 69.7 133 35.3
AUR62013228 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.4e-10 68.9 110 39.1
EL10Ac4g08877 Beta vulgaris HOM05D000030 ORTHO05D000031 5.7e-10 68.6 244 29.1
EL10Ac8g20256 Beta vulgaris HOM05D000030 ORTHO05D000009 2.2e-09 66.6 109 40.4
AUR62033654 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.7e-09 65.9 177 33.3
AUR62010747 Chenopodium quinoa HOM05D000030 ORTHO05D000031 5.3e-08 62.0 110 32.7
FvH4_5g24030 Fragaria vesca HOM05D000030 ORTHO05D000009 5.3e-08 62.0 114 34.2
PGR031G0853 Punica granatum HOM05D000030 ORTHO05D000009 5.3e-08 62.0 114 36.0
PGR044G2094 Punica granatum HOM05D000030 ORTHO05D000009 5.3e-08 62.0 112 35.7
PGR083G0765 Punica granatum HOM05D000030 ORTHO05D000009 5.3e-08 62.0 112 35.7
PGR102G1721 Punica granatum HOM05D000030 ORTHO05D000009 5.3e-08 62.0 112 35.7
Rhsim06G0070300 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.3e-08 62.0 126 32.5
Rhsim13G0141600 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.3e-08 62.0 110 38.2
Aqoxy4G00960 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 7.0e-08 61.6 113 32.7
MD10G1273100 Malus domestica HOM05D000030 ORTHO05D000009 7.0e-08 61.6 108 33.3
Rhsim12G0109500 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.0e-08 61.6 152 32.2
Thecc.06G002000 Theobroma cacao HOM05D000030 ORTHO05D000009 7.0e-08 61.6 112 30.4
MD01G1147100 Malus domestica HOM05D000030 ORTHO05D000031 9.1e-08 61.2 108 33.3
Aqoxy1G03509 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 1.6e-07 60.5 113 32.7
ECA233G5349 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.0e-07 60.1 169 27.2
SHI14625 Sapria himalayana HOM05D000030 ORTHO05D000009 2.0e-07 60.1 114 31.6
ECA240G3204 Erigeron canadensis HOM05D000030 ORTHO05D000009 2.6e-07 59.7 120 33.3
FvH4_7g14271 Fragaria vesca HOM05D000030 ORTHO05D000009 2.6e-07 59.7 114 33.3
PGR064G0018 Punica granatum HOM05D000030 ORTHO05D000009 2.6e-07 59.7 113 36.3
PGR119G1072 Punica granatum HOM05D000030 ORTHO05D000009 2.6e-07 59.7 113 36.3
Hund07399 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.6e-07 59.7 113 35.4
EL10Ac9g21082 Beta vulgaris HOM05D000030 ORTHO05D000009 3.5e-07 59.3 58 51.7
AUR62018015 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.5e-07 59.3 109 33.0
MD00G1092100 Malus domestica HOM05D000030 ORTHO05D000009 3.5e-07 59.3 108 32.4
PSO541G6129 Papaver somniferum HOM05D000030 ORTHO05D000009 3.5e-07 59.3 118 38.1
Prupe.6G144800 Prunus persica HOM05D000030 ORTHO05D000009 3.5e-07 59.3 108 33.3
PGR083G0919 Punica granatum HOM05D000030 ORTHO05D000009 3.5e-07 59.3 109 34.9
PGR119G1248 Punica granatum HOM05D000030 ORTHO05D000009 3.5e-07 59.3 114 34.2
SHI14906 Sapria himalayana HOM05D000030 ORTHO05D000009 3.5e-07 59.3 114 31.6
CANSAT54G2476 Cannabis sativa HOM05D000030 ORTHO05D000009 4.5e-07 58.9 109 33.9
CANSAT80G2234 Cannabis sativa HOM05D000030 ORTHO05D000009 4.5e-07 58.9 109 33.9
SHI30659 Sapria himalayana HOM05D000030 ORTHO05D000009 4.5e-07 58.9 114 32.5
EL10Ac6g14680 Beta vulgaris HOM05D000030 ORTHO05D000023 5.9e-07 58.5 60 53.3
SHI31736 Sapria himalayana HOM05D000030 ORTHO05D000009 5.9e-07 58.5 115 30.4
Hund12458 Selenicereus undatus HOM05D000030 ORTHO05D000009 5.9e-07 58.5 113 37.2
EL10Ac9g21042 Beta vulgaris HOM05D000030 ORTHO05D000009 1.0e-06 57.8 123 38.2
ECA234G3927 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.0e-06 57.8 171 28.7
Nn1g06979 Nelumbo nucifera HOM05D000030 ORTHO05D000031 1.0e-06 57.8 114 35.1
PGR142G2060 Punica granatum HOM05D000030 ORTHO05D000009 1.0e-06 57.8 115 34.8
EL10Ac3g07084 Beta vulgaris HOM05D026991 ORTHO05D000009 1.3e-06 57.4 64 51.6
Psat2g107240 Pisum sativum HOM05D000030 ORTHO05D000009 1.3e-06 57.4 111 33.3
SHI16775 Sapria himalayana HOM05D000030 ORTHO05D000009 1.3e-06 57.4 114 32.5
Aqoxy1G02631 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 1.7e-06 57.0 113 31.0
EL10Ac6g13961 Beta vulgaris HOM05D000030 ORTHO05D000009 1.7e-06 57.0 101 34.7
AUR62026383 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.7e-06 57.0 110 32.7
Ca_06939_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 1.7e-06 57.0 120 33.3
SHI51692 Sapria himalayana HOM05D000030 ORTHO05D000009 1.7e-06 57.0 114 30.7
Aa31LG1G14380 Aethionema arabicum HOM05D000030 ORTHO05D000009 2.2e-06 56.6 109 32.1
EL10Ac7g16379 Beta vulgaris HOM05D000030 ORTHO05D000031 2.2e-06 56.6 177 28.8
HanXRQChr17g0554281 Helianthus annuus HOM05D000030 ORTHO05D000009 2.2e-06 56.6 126 28.6
Hma1.2p1_0321F.1_g124180 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.2e-06 56.6 124 33.1
Aqoxy7G02382 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 2.9e-06 56.2 113 31.0
C04p45650 Brassica napus HOM05D000030 ORTHO05D000009 2.9e-06 56.2 111 30.6
BolC4t26147H Brassica oleracea HOM05D000030 ORTHO05D000009 2.9e-06 56.2 111 30.6
AUR62032925 Chenopodium quinoa HOM05D000030 ORTHO05D000031 2.9e-06 56.2 109 31.2
Glyma.13G159800 Glycine max HOM05D000030 ORTHO05D000009 2.9e-06 56.2 118 30.5
Rhsim05G0117900 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-06 56.2 110 34.5
RcHm_v2.0_Chr1g0315421 Rosa chinensis HOM05D000030 ORTHO05D000009 2.9e-06 56.2 109 32.1
Hund10414 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.9e-06 56.2 113 31.0
Hund13361 Selenicereus undatus HOM05D000030 ORTHO05D050918 2.9e-06 56.2 174 29.9
Aa31LG4G12780 Aethionema arabicum HOM05D000030 ORTHO05D000009 3.8e-06 55.8 109 31.2
AUR62008708 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.8e-06 55.8 110 30.9
Glyma.13G160000 Glycine max HOM05D000030 ORTHO05D000009 3.8e-06 55.8 118 30.5
Manes.03G114216 Manihot esculenta HOM05D000030 ORTHO05D000009 3.8e-06 55.8 110 33.6
Aa31LG4G12800 Aethionema arabicum HOM05D000030 ORTHO05D000009 5.0e-06 55.5 109 31.2
A04p12000 Brassica napus HOM05D000030 ORTHO05D000009 5.0e-06 55.5 111 30.6
BraA04t16865Z Brassica rapa HOM05D000030 ORTHO05D000009 5.0e-06 55.5 111 30.6
Glyma.17G111500 Glycine max HOM05D000030 ORTHO05D000009 5.0e-06 55.5 115 32.2
Lj4g0011950 Lotus japonicus HOM05D000030 ORTHO05D000009 5.0e-06 55.5 118 33.1
Aqoxy7G02841 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 6.5e-06 55.1 119 31.9
COL.COLO4_25807 Corchorus olitorius HOM05D000030 ORTHO05D019047 6.5e-06 55.1 123 30.9
COL.COLO4_29098 Corchorus olitorius HOM05D016140 ORTHO05D019047 6.5e-06 55.1 166 28.3
Duzib150G1674 Durio zibethinus HOM05D000030 ORTHO05D000009 6.5e-06 55.1 119 32.8
Gohir.D06G052933 Gossypium hirsutum HOM05D000030 ORTHO05D000009 6.5e-06 55.1 119 32.8
Gohir.D06G052966 Gossypium hirsutum HOM05D000030 ORTHO05D000009 6.5e-06 55.1 119 32.8
Gorai.010G061500 Gossypium raimondii HOM05D000030 ORTHO05D000009 6.5e-06 55.1 119 32.8
Gorai.010G061600 Gossypium raimondii HOM05D000030 ORTHO05D000009 6.5e-06 55.1 119 32.8
Nn6g33695 Nelumbo nucifera HOM05D000030 ORTHO05D000009 6.5e-06 55.1 124 32.3
RcHm_v2.0_Chr1g0330231 Rosa chinensis HOM05D000030 ORTHO05D000031 6.5e-06 55.1 109 32.1
COL.COLO4_32556 Corchorus olitorius HOM05D000030 ORTHO05D019047 8.5e-06 54.7 123 30.9
Lj1g0020133 Lotus japonicus HOM05D000030 ORTHO05D000009 8.5e-06 54.7 115 30.4
Lalb_Chr16g0389851 Lupinus albus HOM05D000030 ORTHO05D000031 8.5e-06 54.7 119 31.9
PGSC0003DMG400023690 Solanum tuberosum HOM05D000030 ORTHO05D000009 8.5e-06 54.7 118 31.4


User provided reference genes

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