Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 0.0e+00 1409.8 776 100.0
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 0.0e+00 1164.4 770 85.8
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 1.6e-287 992.6 800 72.0
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 3.9e-273 944.9 805 67.6
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 2.8e-247 859.0 817 61.1
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 2.8e-239 832.4 839 60.0
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 3.7e-239 832.0 816 60.2
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 4.8e-239 831.6 807 61.1
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 5.9e-237 824.7 862 57.4
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 7.7e-237 824.3 823 59.3
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 8.5e-236 820.8 796 59.4
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 8.5e-236 820.8 818 59.5
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 3.2e-235 818.9 813 60.1
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 3.6e-234 815.5 821 59.6
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.0e-233 813.9 818 58.9
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.8e-233 813.1 800 59.4
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 3.0e-233 812.4 838 57.3
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 3.0e-233 812.4 826 59.1
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 6.8e-233 811.2 819 59.1
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 2.0e-232 809.7 826 59.0
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 5.7e-232 808.1 818 58.4
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 7.5e-232 807.7 807 59.1
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 7.5e-232 807.7 808 58.8
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 2.8e-231 805.8 822 57.5
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 4.9e-231 805.1 822 56.8
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 4.9e-231 805.1 806 58.8
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 6.3e-231 804.7 772 62.6
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 1.4e-230 803.5 831 57.5
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 2.4e-230 802.7 840 56.9
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 3.1e-230 802.4 806 57.1
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 3.5e-229 798.9 815 58.4
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 4.5e-229 798.5 793 59.3
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 5.9e-229 798.1 818 58.7
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 2.3e-228 796.2 824 58.0
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 2.3e-228 796.2 819 58.6
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 2.9e-228 795.8 838 58.0
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 1.5e-227 793.5 818 58.3
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 1.5e-227 793.5 824 55.6
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 3.3e-227 792.3 825 55.8
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 3.3e-227 792.3 810 59.3
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 4.3e-227 792.0 822 56.9
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 5.6e-227 791.6 796 60.2
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 9.5e-227 790.8 825 55.3
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 2.1e-226 789.6 819 58.9
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 8.0e-226 787.7 809 59.3
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 2.3e-225 786.2 810 58.1
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 5.2e-225 785.0 807 59.2
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 1.7e-223 780.0 818 55.6
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 1.7e-223 780.0 832 57.6
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 1.8e-222 776.5 825 56.4
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 1.6e-221 773.5 832 55.0
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 2.0e-221 773.1 805 59.0
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 5.9e-221 771.5 794 56.7
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.3e-220 770.4 818 55.9
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 1.7e-220 770.0 800 59.1
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 2.5e-219 766.1 837 53.6
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 4.3e-219 765.4 796 55.3
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 7.3e-219 764.6 797 58.1
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 1.6e-218 763.5 793 58.4
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 6.2e-218 761.5 790 56.1
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 1.0e-217 760.8 833 55.0
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 5.2e-217 758.4 808 56.8
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 7.5e-216 754.6 796 58.0
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.3e-215 753.8 801 56.3
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 1.3e-215 753.8 805 56.6
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 2.2e-215 753.1 808 57.1
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 2.2e-215 753.1 804 57.2
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 1.6e-213 746.9 836 56.2
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 2.0e-213 746.5 807 56.3
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 2.7e-213 746.1 786 54.6
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 3.5e-213 745.7 828 55.2
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 7.3e-211 738.0 826 53.5
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 1.4e-209 733.8 792 56.2
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 6.8e-209 731.5 833 54.3
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 7.5e-208 728.0 793 54.0
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 7.1e-206 721.5 827 53.9
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 6.0e-205 718.4 802 54.4
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 1.7e-204 716.8 815 54.5
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 6.2e-202 708.4 795 54.2
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 6.0e-197 691.8 821 51.0
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.0e-196 691.0 877 50.4
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 1.7e-196 690.3 751 55.4
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.0e-196 689.5 819 51.4
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 3.1e-193 679.5 796 52.4
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 1.1e-190 671.0 648 60.2
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 1.2e-184 651.0 744 52.3
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 7.6e-184 648.3 793 48.9
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 3.8e-183 646.0 826 47.9
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.4e-182 644.0 816 52.1
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 6.0e-181 638.6 816 51.5
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.3e-180 637.5 826 49.9
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 1.4e-177 627.5 817 50.8
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 6.4e-175 618.6 831 49.5
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 8.4e-175 618.2 681 56.2
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 1.1e-174 617.8 831 49.5
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 6.0e-173 612.1 823 46.9
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 3.1e-169 599.7 813 49.1
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 4.0e-169 599.4 813 49.8
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 9.0e-169 598.2 815 49.3
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 3.2e-166 589.7 804 48.6
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 2.7e-165 586.6 812 50.1
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 2.1e-162 577.0 812 48.3
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 3.7e-162 576.2 790 45.6
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 8.2e-162 575.1 795 45.9
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 3.1e-161 573.2 584 60.1
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 5.3e-161 572.4 818 44.7
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 2.6e-160 570.1 790 45.7
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 4.5e-160 569.3 790 45.2
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 2.3e-156 557.0 915 42.8
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 2.8e-154 550.1 813 43.9
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 8.2e-154 548.5 854 45.4
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 2.6e-152 543.5 652 51.8
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 1.7e-151 540.8 703 51.1
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 5.1e-148 529.3 745 45.4
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 5.7e-147 525.8 692 46.7
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.9e-142 510.8 445 62.2
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 3.3e-131 473.4 870 40.9
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.0e-128 464.2 450 59.1
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 4.5e-128 463.0 517 52.6
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 4.7e-125 453.0 726 43.9
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 1.2e-123 448.4 476 59.5
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 2.2e-122 444.1 549 51.7
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 5.5e-118 429.5 532 56.0
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 3.5e-104 383.6 422 59.0
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 5.2e-92 343.2 636 42.0
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 1.2e-91 342.0 797 35.8
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 4.4e-91 340.1 347 54.5
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 7.5e-91 339.3 309 60.8
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 8.9e-84 315.8 761 33.6
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 1.7e-82 311.6 518 40.5
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 1.6e-80 305.1 884 32.1
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 2.5e-78 297.7 541 37.7
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 4.9e-74 283.5 456 39.9
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 9.3e-73 279.3 276 57.6
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 1.8e-68 265.0 447 42.1
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 6.2e-61 240.0 387 46.0
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 1.3e-55 222.2 776 28.0
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 3.0e-55 221.1 203 62.1
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 9.6e-54 216.1 357 44.5
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.8e-45 188.0 395 37.0
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 3.2e-41 174.5 180 55.6
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.8e-34 151.0 329 37.4
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.7e-32 144.1 313 37.1
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 4.7e-32 144.1 135 59.3
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.4e-22 110.2 142 47.9
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 5.9e-19 100.5 102 53.9
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.0e-18 99.8 589 24.6
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.2e-18 98.6 204 36.8
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 9.4e-17 93.2 136 39.0
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 3.6e-16 91.3 195 39.0
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.0e-15 89.7 287 31.0
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.2e-15 87.4 128 43.8
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 2.2e-13 82.0 151 39.7
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.8e-12 79.0 346 28.9
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 3.5e-11 74.7 122 41.8
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 3.5e-11 74.7 71 64.8
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.5e-11 74.7 165 34.5
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.9e-11 73.9 243 32.1
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-10 72.8 70 55.7
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-10 72.8 80 50.0
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 2.2e-10 72.0 112 41.1
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.9e-10 71.6 130 40.8
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.1e-08 65.5 164 36.0
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 6.1e-08 63.9 51 60.8
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 8.0e-08 63.5 121 42.1
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 8.0e-08 63.5 41 73.2
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 3.0e-07 61.6 89 50.6
HPP92_026825 Vanilla planifolia HOM05D003551 ORTHO05D004343 5.2e-07 60.8 79 46.8
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 8.8e-07 60.1 64 51.6
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 3.4e-06 58.2 65 52.3
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 9.8e-06 56.6 56 50.0


User provided reference genes

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