Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 6.5e-112 407.5 223 100.0
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 1.9e-87 326.2 225 82.2
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 7.3e-55 218.0 224 54.5
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 1.6e-54 216.9 226 58.4
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 6.4e-51 204.9 227 58.1
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 9.2e-50 201.1 227 55.5
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 2.6e-44 183.0 235 47.7
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 2.2e-43 179.9 225 48.4
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 4.9e-43 178.7 228 46.1
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 6.4e-43 178.3 230 48.7
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 2.4e-42 176.4 234 47.9
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 2.4e-42 176.4 229 47.6
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 4.1e-42 175.6 231 46.8
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 4.1e-42 175.6 229 46.7
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 5.4e-42 175.3 231 47.2
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 7.1e-42 174.9 221 47.1
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 9.2e-42 174.5 233 43.8
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 1.6e-41 173.7 233 44.6
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 2.7e-41 172.9 234 46.2
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 6.0e-41 171.8 227 47.1
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 7.8e-41 171.4 225 47.1
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 2.3e-40 169.9 228 46.5
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 2.3e-40 169.9 228 46.5
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.5e-39 167.2 220 49.5
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 5.6e-39 165.2 227 46.3
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 1.6e-38 163.7 231 50.2
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 1.6e-38 163.7 225 45.8
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 2.1e-38 163.3 228 45.2
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 2.1e-38 163.3 220 47.7
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 2.8e-38 162.9 228 46.5
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 2.8e-38 162.9 225 44.4
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 4.7e-38 162.2 247 42.5
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 4.7e-38 162.2 219 47.0
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 8.1e-38 161.4 237 45.6
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 1.4e-37 160.6 227 44.9
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 1.4e-37 160.6 269 42.0
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 5.2e-37 158.7 224 49.6
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 6.9e-37 158.3 230 44.3
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 6.9e-37 158.3 228 43.9
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 8.9e-37 157.9 236 44.9
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 8.9e-37 157.9 223 44.4
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.2e-36 157.5 227 44.9
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 1.5e-36 157.1 229 43.7
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 1.5e-36 157.1 229 43.7
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 1.5e-36 157.1 232 45.3
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 2.0e-36 156.8 219 45.2
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 2.6e-36 156.4 224 43.3
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.4e-36 155.6 227 43.2
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 4.4e-36 155.6 223 46.6
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 4.4e-36 155.6 223 46.6
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 5.8e-36 155.2 227 44.9
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 1.3e-35 154.1 231 45.0
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 1.7e-35 153.7 231 42.9
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 2.2e-35 153.3 231 42.9
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 2.9e-35 152.9 238 43.7
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 4.9e-35 152.1 221 44.8
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 8.4e-35 151.4 223 44.8
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 1.4e-34 150.6 227 43.6
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.9e-34 150.2 226 43.4
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 2.4e-34 149.8 228 43.9
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 2.4e-34 149.8 230 45.2
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 3.2e-34 149.4 223 41.7
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 4.2e-34 149.1 231 42.9
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 4.2e-34 149.1 225 40.4
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 5.4e-34 148.7 233 43.8
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 5.4e-34 148.7 228 43.9
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 9.3e-34 147.9 228 43.9
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 9.3e-34 147.9 226 41.2
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 9.3e-34 147.9 193 44.6
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 1.6e-33 147.1 226 43.4
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 2.1e-33 146.7 227 41.4
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 4.6e-33 145.6 232 41.8
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 6.0e-33 145.2 181 45.9
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 1.3e-32 144.1 220 42.7
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 5.1e-32 142.1 226 42.0
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 5.1e-32 142.1 219 40.6
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 5.1e-32 142.1 227 43.6
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 3.3e-31 139.4 221 41.6
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 4.3e-31 139.0 227 41.4
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 4.3e-31 139.0 220 46.4
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 5.6e-31 138.7 228 41.7
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 7.3e-31 138.3 241 40.2
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 9.6e-31 137.9 232 40.5
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 1.3e-30 137.5 237 41.4
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 2.8e-30 136.3 234 38.5
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 2.8e-30 136.3 228 39.0
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 3.6e-30 136.0 230 40.0
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 1.8e-29 133.7 220 45.0
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 5.3e-29 132.1 233 37.3
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 7.6e-28 128.3 239 39.7
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.3e-27 127.5 223 36.3
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 1.3e-27 127.5 237 38.0
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 3.8e-27 125.9 129 50.4
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 2.4e-26 123.2 226 42.5
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 4.2e-26 122.5 128 52.3
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 2.7e-25 119.8 226 41.2
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 7.9e-25 118.2 228 41.2
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 2.3e-24 116.7 219 41.1
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 3.9e-24 115.9 222 37.4
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 5.1e-24 115.5 202 39.1
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 5.1e-24 115.5 228 40.8
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 4.3e-23 112.5 128 47.7
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 4.3e-23 112.5 142 45.8
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 6.9e-21 105.1 123 49.6
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 7.6e-20 101.7 118 50.0
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 7.6e-20 101.7 125 49.6
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 3.2e-18 96.3 183 39.3
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 4.0e-13 79.3 53 67.9
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 4.0e-13 79.3 234 26.5
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 4.2e-10 69.3 247 28.7
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 7.1e-10 68.6 232 28.9
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 1.9e-07 60.5 49 59.2
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 4.8e-06 55.8 88 34.1


User provided reference genes

Program Settings