Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.9e-58 228.8 105 100.0
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 2.8e-57 224.9 105 98.1
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 5.0e-54 214.2 105 90.5
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 9.3e-53 209.9 105 87.6
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.6e-52 209.1 104 91.3
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 3.5e-52 208.0 101 90.1
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 6.1e-52 207.2 101 90.1
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 6.1e-52 207.2 101 90.1
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 7.9e-52 206.8 105 87.6
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 1.3e-51 206.1 103 88.3
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 3.0e-51 204.9 100 88.0
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 3.0e-51 204.9 105 85.7
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 3.0e-51 204.9 102 87.3
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 3.0e-51 204.9 102 87.3
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 3.9e-51 204.5 105 85.7
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 3.9e-51 204.5 105 85.7
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 3.9e-51 204.5 104 90.4
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 8.7e-51 203.4 105 85.7
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 1.1e-50 203.0 104 84.6
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.5e-50 202.6 105 83.8
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.5e-50 202.6 105 83.8
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 1.9e-50 202.2 104 84.6
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.5e-50 201.8 105 84.8
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 3.3e-50 201.4 98 88.8
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 4.3e-50 201.1 104 84.6
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 5.7e-50 200.7 103 85.4
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 7.4e-50 200.3 105 86.7
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 1.6e-49 199.1 107 85.0
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 2.2e-49 198.7 104 87.5
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 2.8e-49 198.4 103 83.5
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 2.8e-49 198.4 104 86.5
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.8e-49 198.4 104 86.5
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 3.7e-49 198.0 104 82.7
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 4.8e-49 197.6 101 84.2
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 6.3e-49 197.2 105 81.9
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 6.3e-49 197.2 105 81.9
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 6.3e-49 197.2 105 81.9
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 6.3e-49 197.2 105 81.9
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 6.3e-49 197.2 105 81.9
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 6.3e-49 197.2 105 81.9
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 6.3e-49 197.2 103 84.5
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 1.1e-48 196.4 105 82.9
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.1e-48 196.4 104 86.5
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 1.1e-48 196.4 104 80.8
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 1.4e-48 196.1 102 84.3
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 1.4e-48 196.1 103 83.5
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 1.8e-48 195.7 103 85.4
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 1.8e-48 195.7 104 81.7
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 1.8e-48 195.7 103 83.5
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 2.4e-48 195.3 105 82.9
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 2.4e-48 195.3 103 83.5
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 3.1e-48 194.9 103 82.5
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 4.1e-48 194.5 102 80.4
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 6.9e-48 193.7 107 80.4
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 1.5e-47 192.6 105 78.1
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 1.5e-47 192.6 103 83.5
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 1.5e-47 192.6 106 82.1
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 1.5e-47 192.6 105 80.0
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 2.0e-47 192.2 103 83.5
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 2.6e-47 191.8 103 81.6
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 2.6e-47 191.8 105 78.1
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 2.6e-47 191.8 105 79.0
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 3.4e-47 191.4 104 80.8
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 3.4e-47 191.4 104 80.8
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 4.5e-47 191.0 103 81.6
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 4.5e-47 191.0 105 79.0
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 4.5e-47 191.0 105 82.9
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 1.3e-46 189.5 105 80.0
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 1.7e-46 189.1 104 79.8
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 1.7e-46 189.1 99 81.8
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 2.2e-46 188.7 105 79.0
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 5.0e-46 187.6 98 81.6
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 6.5e-46 187.2 106 79.2
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 8.5e-46 186.8 104 84.6
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 2.5e-45 185.3 107 80.4
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 5.5e-45 184.1 96 82.3
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 5.5e-45 184.1 103 79.6
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.6e-44 182.6 105 76.2
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 2.1e-44 182.2 103 74.8
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 2.1e-44 182.2 96 82.3
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 2.7e-44 181.8 105 75.2
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 2.7e-44 181.8 105 75.2
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 1.0e-43 179.9 105 74.3
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 1.0e-43 179.9 102 75.5
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 1.1e-42 176.4 99 75.8
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 1.1e-42 176.4 103 76.7
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 3.3e-42 174.9 101 78.2
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.1e-40 169.9 105 76.2
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 2.4e-40 168.7 103 73.8
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 7.2e-37 157.1 102 65.7
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 1.8e-32 142.5 67 89.6
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 3.5e-31 138.3 105 61.9
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 4.2e-29 131.3 77 79.2
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 1.2e-28 129.8 88 64.8
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 3.0e-27 125.2 70 80.0
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 2.9e-14 82.0 41 85.4
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 3.2e-13 78.6 82 50.0
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 6.1e-12 74.3 62 51.6
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 8.0e-12 73.9 69 49.3
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 4.1e-08 61.6 70 44.3
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 4.1e-08 61.6 59 50.8
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 5.9e-07 57.8 27 85.2


User provided reference genes

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