Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 6.6e-298 1026.5 502 100.0
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.1e-212 743.4 502 77.1
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.3e-152 543.9 421 70.5
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 1.2e-124 451.1 503 49.9
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 2.0e-124 450.3 432 58.6
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 2.8e-107 393.3 500 45.8
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 2.7e-105 386.7 498 46.0
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 3.5e-105 386.3 502 44.0
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 5.6e-103 379.0 506 45.5
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 3.6e-102 376.3 499 44.7
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 2.6e-100 370.2 497 43.5
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 3.4e-100 369.8 501 44.9
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 9.8e-100 368.2 497 43.9
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 2.9e-99 366.7 499 43.7
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 3.2e-98 363.2 507 44.2
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 3.2e-98 363.2 506 43.9
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 1.2e-97 361.3 493 43.6
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.3e-96 357.8 507 43.6
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 2.5e-95 353.6 498 43.4
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 4.3e-95 352.8 494 43.7
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 1.8e-93 347.4 502 43.6
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 2.3e-93 347.1 503 43.1
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 1.2e-92 344.7 502 42.4
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 2.0e-92 344.0 497 42.5
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 3.4e-92 343.2 496 43.8
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 5.8e-92 342.4 498 41.6
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.7e-91 340.9 517 41.6
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 1.1e-90 338.2 502 42.8
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 9.2e-90 335.1 486 42.2
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 1.2e-89 334.7 497 41.0
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 1.2e-89 334.7 498 42.0
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 1.6e-89 334.3 498 42.6
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 1.6e-89 334.3 497 41.6
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 2.1e-89 334.0 506 41.1
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 7.8e-89 332.0 498 41.8
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 3.0e-88 330.1 493 41.0
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 3.0e-88 330.1 495 42.2
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 1.5e-87 327.8 507 40.6
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 3.3e-87 326.6 504 40.7
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 3.3e-87 326.6 488 42.8
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 5.6e-87 325.9 500 41.6
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 7.3e-87 325.5 496 41.3
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 7.3e-87 325.5 500 40.8
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 2.8e-86 323.6 497 40.8
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 4.7e-86 322.8 609 36.8
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 4.7e-86 322.8 510 40.8
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 8.1e-86 322.0 493 41.0
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 1.1e-85 321.6 499 41.1
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 1.1e-85 321.6 499 41.7
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 1.4e-85 321.2 490 41.8
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 1.4e-85 321.2 499 39.1
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 1.8e-85 320.9 507 41.0
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 2.3e-85 320.5 488 41.4
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 8.9e-85 318.5 494 41.5
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 1.5e-84 317.8 497 41.0
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 2.0e-84 317.4 499 40.7
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 2.0e-84 317.4 501 39.9
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 2.0e-84 317.4 519 40.5
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 9.9e-84 315.1 499 40.3
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 2.9e-83 313.5 507 40.8
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 3.7e-83 313.2 506 40.1
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 8.3e-83 312.0 497 40.6
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 8.3e-83 312.0 496 40.7
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 8.3e-83 312.0 488 41.8
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 1.4e-82 311.2 504 39.3
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.4e-82 311.2 496 40.3
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 1.9e-82 310.8 507 40.4
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 5.4e-82 309.3 505 40.6
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 9.2e-82 308.5 496 39.5
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 1.2e-81 308.1 506 39.7
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 1.2e-81 308.1 501 39.1
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 1.6e-81 307.8 507 39.8
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 1.6e-81 307.8 489 41.9
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 2.7e-81 307.0 499 39.7
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 4.6e-81 306.2 492 40.4
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 6.0e-81 305.8 512 39.8
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 1.3e-80 304.7 496 39.7
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 1.7e-80 304.3 507 40.0
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 5.6e-79 299.3 509 37.7
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 7.3e-79 298.9 284 53.9
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 2.1e-78 297.4 524 38.4
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 2.1e-78 297.4 490 40.6
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 8.1e-78 295.4 479 40.1
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 1.8e-77 294.3 491 39.3
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 3.1e-77 293.5 490 39.8
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 2.0e-76 290.8 500 38.4
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 4.9e-75 286.2 436 41.3
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 1.4e-74 284.6 289 55.0
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 2.3e-72 277.3 498 38.2
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 2.3e-72 277.3 489 38.7
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 1.2e-70 271.6 513 33.9
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 3.1e-69 266.9 448 39.5
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 3.2e-66 256.9 278 51.8
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 3.5e-65 253.4 483 38.1
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 9.6e-63 245.4 464 37.7
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 6.9e-61 239.2 276 50.0
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 2.0e-60 237.7 449 37.2
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 6.2e-54 216.1 257 48.6
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 3.1e-53 213.8 385 38.7
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 4.9e-51 206.5 441 34.5
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.9e-50 204.5 405 35.1
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.9e-50 204.5 405 35.3
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 1.3e-48 198.4 252 44.8
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 1.5e-47 194.9 268 42.2
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 2.8e-46 190.7 253 43.9
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 8.2e-46 189.1 370 35.4
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 1.8e-45 188.0 251 43.8
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 2.5e-42 177.6 411 35.0
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 4.2e-42 176.8 400 34.5
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 1.5e-39 168.3 475 30.3
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 1.4e-37 161.8 495 28.9
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 2.0e-36 157.9 562 27.6
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 4.5e-36 156.8 192 48.4
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 2.2e-35 154.5 475 29.5
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 3.9e-32 143.7 74 86.5
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 6.7e-32 142.9 99 68.7
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 8.8e-32 142.5 79 82.3
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.1e-31 142.1 79 81.0
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.1e-29 135.6 106 63.2
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.9e-27 127.5 99 64.6
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.5e-26 124.4 167 46.7
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 6.7e-24 116.3 280 32.1
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 3.3e-23 114.0 103 54.4
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 4.8e-22 110.2 168 39.3
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 1.1e-21 109.0 146 39.7
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 1.8e-21 108.2 165 42.4
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 4.5e-20 103.6 169 37.3
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 1.3e-19 102.1 107 49.5
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 2.9e-19 100.9 54 85.2
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 1.9e-18 98.2 167 36.5
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.1e-17 94.7 147 46.3
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 4.5e-12 77.0 145 33.8
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 1.0e-11 75.9 217 30.4
SHI17433 Sapria himalayana HOM05D005563 ORTHO05D006667 1.0e-11 75.9 57 61.4
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 1.7e-11 75.1 97 46.4
Thecc.10G189700 Theobroma cacao HOM05D005563 ORTHO05D006667 2.5e-10 71.2 115 38.3
Actinidia28221 Actinidia chinensis HOM05D005563 ORTHO05D006667 4.0e-08 63.9 94 44.7


User provided reference genes

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