Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 4.4e-79 298.1 177 100.0
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 2.9e-70 268.9 177 84.7
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 1.6e-33 146.7 146 61.0
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 3.8e-30 135.6 131 54.2
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 1.4e-29 133.7 121 65.3
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 1.9e-29 133.3 127 63.0
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 9.3e-29 131.0 132 59.8
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 3.5e-28 129.0 107 57.9
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 1.0e-27 127.5 131 57.3
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 1.3e-27 127.1 112 65.2
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 1.8e-27 126.7 115 66.1
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 1.8e-27 126.7 130 53.1
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 1.8e-27 126.7 100 71.0
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 1.8e-27 126.7 98 57.1
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 3.0e-27 125.9 133 57.1
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 6.7e-27 124.8 98 55.1
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 1.1e-26 124.0 106 63.2
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 2.5e-26 122.9 100 57.0
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 5.6e-26 121.7 102 67.6
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 9.6e-26 120.9 131 51.9
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 9.6e-26 120.9 131 44.3
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 9.6e-26 120.9 99 53.5
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 1.3e-25 120.6 131 45.8
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.3e-25 120.6 105 61.9
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 1.3e-25 120.6 133 43.6
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 2.1e-25 119.8 99 66.7
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 2.8e-25 119.4 120 61.7
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 4.8e-25 118.6 131 44.3
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 4.8e-25 118.6 131 44.3
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 6.2e-25 118.2 109 60.6
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 1.8e-24 116.7 108 63.9
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 1.8e-24 116.7 132 40.9
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 2.4e-24 116.3 109 59.6
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 4.0e-24 115.5 121 56.2
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 6.9e-24 114.8 121 44.6
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 9.0e-24 114.4 112 57.1
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 1.2e-23 114.0 112 62.5
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.2e-23 114.0 106 64.2
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 1.5e-23 113.6 100 52.0
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 2.0e-23 113.2 109 48.6
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.0e-23 113.2 100 66.0
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 3.4e-23 112.5 104 50.0
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 4.5e-23 112.1 121 57.0
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 4.5e-23 112.1 99 58.6
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 4.9e-22 108.6 109 46.8
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 8.4e-22 107.8 124 41.9
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 1.1e-21 107.5 130 54.6
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 2.5e-21 106.3 108 46.3
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 2.5e-21 106.3 109 57.8
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 4.2e-21 105.5 103 47.6
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 4.2e-21 105.5 96 61.5
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 4.2e-21 105.5 121 54.5
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 5.5e-21 105.1 65 69.2
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 2.1e-20 103.2 103 45.6
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 2.1e-20 103.2 120 41.7
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 2.7e-20 102.8 122 54.9
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 3.5e-20 102.4 76 57.9
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 7.9e-20 101.3 117 50.4
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 1.0e-19 100.9 114 45.6
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 1.0e-19 100.9 84 48.8
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 3.0e-19 99.4 133 41.4
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 6.7e-19 98.2 93 65.6
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 8.7e-19 97.8 109 42.2
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 4.3e-18 95.5 90 61.1
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 5.7e-18 95.1 90 63.3
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 9.6e-18 94.4 122 41.8
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 1.3e-17 94.0 95 62.1
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.1e-17 93.2 65 58.5
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 3.7e-17 92.4 114 56.1
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 4.8e-17 92.0 107 55.1
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 6.2e-17 91.7 91 61.5
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 2.4e-16 89.7 72 58.3
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 3.1e-16 89.4 66 63.6
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 7.6e-15 84.7 109 50.5
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 3.8e-14 82.4 99 54.5
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 5.0e-14 82.0 109 48.6
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 8.4e-14 81.3 102 41.2
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 8.4e-14 81.3 112 50.9
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 4.2e-13 79.0 99 52.5
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 7.2e-13 78.2 109 50.5
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 9.3e-13 77.8 99 53.5
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 9.3e-13 77.8 67 59.7
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 2.7e-12 76.3 96 36.5
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 3.9e-11 72.4 109 45.9
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 3.9e-11 72.4 109 45.9
EL10Ac1g00699 Beta vulgaris HOM05D007737 ORTHO05D009754 1.1e-10 70.9 104 39.4
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 3.3e-10 69.3 99 49.5
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 2.4e-08 63.2 41 68.3
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 3.4e-07 59.3 46 54.3
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 2.9e-06 56.2 66 39.4


User provided reference genes

Program Settings