Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 7.1e-167 590.5 295 100.0
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.4e-143 513.1 260 98.5
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 2.4e-130 469.2 283 84.8
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 2.0e-129 466.1 286 79.7
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 3.5e-129 465.3 290 79.3
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 1.0e-128 463.8 290 80.7
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 2.9e-128 462.2 290 79.7
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 8.5e-128 460.7 290 79.0
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.1e-127 460.3 286 80.1
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 1.1e-127 460.3 290 79.7
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 1.9e-127 459.5 290 79.0
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 4.2e-127 458.4 290 78.3
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.2e-126 456.8 286 78.3
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 2.1e-126 456.1 290 78.3
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 2.7e-126 455.7 284 82.0
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 3.6e-126 455.3 290 79.7
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 3.6e-126 455.3 289 77.2
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 6.1e-126 454.5 285 78.6
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 8.0e-126 454.1 290 79.0
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.0e-125 453.8 285 78.2
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 6.8e-125 451.1 290 77.6
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 8.8e-125 450.7 285 77.5
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 1.2e-124 450.3 286 77.3
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 2.0e-124 449.5 292 76.7
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 2.0e-124 449.5 286 78.0
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 2.0e-124 449.5 290 77.9
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 2.6e-124 449.1 289 77.9
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 2.6e-124 449.1 285 77.2
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 3.4e-124 448.7 284 79.6
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 3.4e-124 448.7 290 76.6
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.4e-124 448.4 331 70.1
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 4.4e-124 448.4 290 76.6
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 4.4e-124 448.4 284 77.5
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 5.7e-124 448.0 290 76.9
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 9.8e-124 447.2 283 79.5
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 1.7e-123 446.4 291 77.3
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 1.7e-123 446.4 289 76.8
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 3.7e-123 445.3 263 82.9
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 3.7e-123 445.3 290 76.2
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.8e-123 444.9 288 76.4
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 4.8e-123 444.9 299 74.9
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 6.3e-123 444.5 288 75.0
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.1e-122 443.7 288 76.4
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 1.8e-122 443.0 278 78.8
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 2.4e-122 442.6 284 77.1
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 2.4e-122 442.6 293 75.8
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 2.4e-122 442.6 288 76.7
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 2.4e-122 442.6 288 76.7
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 2.4e-122 442.6 288 77.8
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 4.1e-122 441.8 282 77.3
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.1e-122 441.8 292 74.7
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 4.1e-122 441.8 290 76.2
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 5.4e-122 441.4 291 77.0
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 7.0e-122 441.0 290 75.2
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 9.1e-122 440.7 288 76.0
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 9.1e-122 440.7 288 76.0
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 1.2e-121 440.3 290 75.9
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.6e-121 439.9 284 76.8
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 1.6e-121 439.9 288 76.0
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 2.0e-121 439.5 288 74.7
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.7e-121 439.1 288 75.3
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 3.5e-121 438.7 301 72.4
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.5e-121 438.3 295 74.9
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 7.7e-121 437.6 282 76.2
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.3e-120 436.8 301 72.8
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 8.6e-120 434.1 288 74.3
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 8.6e-120 434.1 290 75.9
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 8.6e-120 434.1 290 75.9
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 4.2e-119 431.8 279 76.3
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 1.2e-118 430.3 295 73.6
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.6e-118 429.9 282 75.2
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.6e-118 429.9 288 73.3
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 4.7e-118 428.3 280 75.7
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 4.7e-118 428.3 290 74.8
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.0e-117 427.2 288 74.7
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.0e-117 427.2 311 69.8
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 1.4e-117 426.8 290 75.2
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 1.5e-116 423.3 282 74.5
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 1.5e-116 423.3 290 73.4
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.6e-116 422.5 310 69.7
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 3.4e-116 422.2 286 74.8
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 4.4e-116 421.8 286 73.8
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 4.4e-116 421.8 286 73.8
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 9.8e-116 420.6 290 73.4
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.7e-115 419.9 286 73.4
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 1.7e-115 419.9 281 74.4
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 2.2e-115 419.5 279 73.8
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 2.8e-115 419.1 283 74.6
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.7e-115 418.7 284 74.3
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 6.3e-115 417.9 286 73.4
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 5.4e-114 414.8 276 72.8
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 7.0e-114 414.5 320 67.5
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 3.5e-113 412.1 267 79.0
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 3.8e-112 408.7 287 70.7
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 6.6e-112 407.9 289 70.2
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 8.0e-110 401.0 260 77.3
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 1.1e-103 380.6 238 80.7
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.9e-103 379.8 288 68.1
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.1e-101 374.0 295 65.1
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 6.8e-101 371.3 268 72.0
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 2.0e-100 369.8 263 72.2
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 2.0e-100 369.8 236 79.7
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 7.5e-100 367.9 239 74.1
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 8.6e-96 354.4 263 68.1
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 8.6e-96 354.4 286 64.7
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 1.1e-93 347.4 280 60.4
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 7.5e-92 341.3 284 60.6
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 1.9e-87 326.6 277 59.9
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.2e-86 323.9 286 57.7
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 1.2e-86 323.9 254 64.2
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 2.2e-83 313.2 233 66.5
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 7.1e-82 308.1 197 75.1
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.6e-73 280.4 210 66.7
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 2.1e-73 280.0 278 51.8
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.7e-73 279.6 225 64.9
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 3.5e-73 279.3 185 74.6
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 3.4e-60 236.1 338 42.0
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 6.5e-51 205.3 142 75.4
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 9.3e-50 201.4 181 61.9
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.3e-47 192.6 143 67.8
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 3.2e-42 176.4 129 69.8
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 1.2e-41 174.5 248 40.3
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 2.7e-41 173.3 107 72.0
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.5e-36 156.0 96 77.1
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 5.1e-32 142.5 245 38.4
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 2.9e-19 100.1 82 59.8
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 3.1e-13 80.1 67 58.2
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.0e-11 75.1 50 78.0


User provided reference genes

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