Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 1.1e-69 266.5 139 100.0
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 8.5e-62 240.4 130 93.8
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 2.2e-41 172.6 130 65.4
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 6.0e-31 137.9 124 54.8
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 3.0e-30 135.6 119 53.8
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 8.6e-30 134.0 119 55.5
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 1.1e-29 133.7 119 53.8
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 1.9e-29 132.9 119 51.3
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 9.5e-29 130.6 119 52.1
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 1.2e-28 130.2 119 52.1
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 1.6e-28 129.8 119 52.1
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.6e-28 129.8 114 53.5
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 2.1e-28 129.4 119 48.7
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 2.8e-28 129.0 120 50.8
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 2.8e-28 129.0 119 52.1
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 3.6e-28 128.6 120 50.8
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 4.7e-28 128.3 114 55.3
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 8.1e-28 127.5 120 51.7
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 1.8e-27 126.3 114 54.4
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 2.3e-27 125.9 114 52.6
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 2.3e-27 125.9 119 52.9
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 2.3e-27 125.9 114 54.4
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 2.3e-27 125.9 119 53.8
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 3.1e-27 125.6 119 51.3
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 3.1e-27 125.6 122 51.6
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 4.0e-27 125.2 119 48.7
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 4.0e-27 125.2 119 51.3
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 5.2e-27 124.8 119 51.3
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 5.2e-27 124.8 114 55.3
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 1.5e-26 123.2 118 50.0
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 2.0e-26 122.9 120 46.7
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 2.0e-26 122.9 119 49.6
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 2.0e-26 122.9 122 50.8
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 2.0e-26 122.9 119 50.4
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 2.0e-26 122.9 123 43.9
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 2.6e-26 122.5 120 47.5
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 3.4e-26 122.1 125 45.6
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 4.4e-26 121.7 128 48.4
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 5.8e-26 121.3 123 46.3
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 9.9e-26 120.6 118 50.8
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 9.9e-26 120.6 119 48.7
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 1.3e-25 120.2 117 49.6
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 1.3e-25 120.2 112 52.7
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 1.7e-25 119.8 119 47.1
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 2.2e-25 119.4 116 50.0
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 2.2e-25 119.4 129 48.1
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 2.2e-25 119.4 125 49.6
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 2.9e-25 119.0 125 45.6
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 2.9e-25 119.0 132 47.0
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 3.7e-25 118.6 120 50.0
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 3.7e-25 118.6 114 51.8
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 4.9e-25 118.2 132 46.2
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 4.9e-25 118.2 115 54.8
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 6.4e-25 117.9 131 47.3
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 6.4e-25 117.9 131 47.3
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 1.1e-24 117.1 119 47.1
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 1.1e-24 117.1 114 50.9
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 1.1e-24 117.1 120 46.7
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 1.4e-24 116.7 119 47.1
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.9e-24 116.3 119 47.1
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 2.4e-24 115.9 139 42.4
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 2.4e-24 115.9 119 46.2
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 2.4e-24 115.9 119 46.2
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 3.2e-24 115.5 118 45.8
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 7.1e-24 114.4 115 47.8
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 7.1e-24 114.4 119 44.5
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 9.2e-24 114.0 114 47.4
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 1.2e-23 113.6 134 41.8
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 1.6e-23 113.2 125 44.0
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.6e-23 113.2 119 47.1
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 3.5e-23 112.1 126 45.2
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 3.5e-23 112.1 117 47.9
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 3.5e-23 112.1 119 45.4
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 4.6e-23 111.7 123 48.8
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 4.6e-23 111.7 148 37.8
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.3e-22 110.2 119 45.4
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 1.3e-22 110.2 124 46.8
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 3.0e-22 109.0 120 47.5
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 3.9e-22 108.6 135 42.2
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 1.5e-21 106.7 125 39.2
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 1.5e-21 106.7 114 45.6
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 2.5e-21 105.9 120 45.8
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 3.3e-21 105.5 125 39.2
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 3.3e-21 105.5 119 41.2
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 9.6e-21 104.0 118 44.1
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 3.6e-20 102.1 118 42.4
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 4.7e-20 101.7 136 42.6
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 4.7e-20 101.7 136 42.6
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 4.7e-20 101.7 118 41.5
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 8.1e-20 100.9 118 41.5
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 8.9e-19 97.4 123 42.3
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 5.8e-18 94.7 97 48.5
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 2.9e-17 92.4 102 44.1
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 3.8e-17 92.0 111 42.3
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 8.4e-17 90.9 97 49.5
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.1e-16 90.5 123 36.6
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 1.4e-16 90.1 94 47.9
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 1.4e-16 90.1 75 54.7
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 9.3e-16 87.4 99 44.4
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 9.3e-16 87.4 138 37.7
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 2.1e-15 86.3 119 41.2
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 6.0e-15 84.7 88 47.7
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 1.0e-14 84.0 112 39.3
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.7e-14 83.2 118 35.6
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 3.9e-14 82.0 77 53.2
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.5e-13 80.1 124 41.1
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 1.9e-13 79.7 77 49.4
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 4.3e-13 78.6 121 38.8
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 5.6e-13 78.2 119 40.3
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 2.1e-12 76.3 88 42.0
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 3.1e-11 72.4 68 51.5
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 3.1e-11 72.4 105 39.0
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 4.0e-11 72.0 67 49.3
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 5.8e-10 68.2 116 29.3
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 2.2e-09 66.2 54 61.1
Zm00001eb230930 Zea mays HOM05D002637 ORTHO05D009046 1.9e-08 63.2 106 33.0
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 2.4e-08 62.8 94 39.4
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 2.3e-06 56.2 53 50.9


User provided reference genes

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