Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013725 Chenopodium quinoa HOM05D001081 ORTHO05D007101 1.5e-56 222.6 110 100.0
AUR62018052 Chenopodium quinoa HOM05D001081 ORTHO05D007101 1.5e-53 212.6 106 98.1
AUR62023429 Chenopodium quinoa HOM05D001081 ORTHO05D007101 3.4e-53 211.5 106 97.2
TAR625G0271 Trochodendron aralioides HOM05D001081 ORTHO05D007101 1.0e-49 199.9 106 89.6
Aqoxy4G03008 Aquilegia oxysepala HOM05D001081 ORTHO05D007101 1.5e-48 196.1 105 88.6
Sc13g0009920 Simmondsia chinensis HOM05D001081 ORTHO05D007101 1.9e-48 195.7 106 88.7
Aqoxy3G01434 Aquilegia oxysepala HOM05D001081 ORTHO05D007101 2.5e-48 195.3 105 88.6
Hund21005 Selenicereus undatus HOM05D001081 ORTHO05D007101 4.3e-48 194.5 106 87.7
EL10Ac1g00785 Beta vulgaris HOM05D001081 ORTHO05D007101 3.6e-47 191.4 103 89.3
Nn6g34886 Nelumbo nucifera HOM05D001081 ORTHO05D007101 8.0e-47 190.3 105 83.8
Ah.05g173160 Amaranthus hybridus HOM05D001081 ORTHO05D007101 1.0e-46 189.9 106 85.8
ECA238G0006 Erigeron canadensis HOM05D001081 ORTHO05D007101 1.0e-46 189.9 104 85.6
Nn3g16671 Nelumbo nucifera HOM05D001081 ORTHO05D007101 1.4e-46 189.5 105 83.8
CANSAT21G1508 Cannabis sativa HOM05D001081 ORTHO05D007101 4.0e-46 188.0 106 84.9
Ciclev10022846m.g Citrus clementina HOM05D001081 ORTHO05D007101 5.2e-46 187.6 106 84.0
Ah.03g146510 Amaranthus hybridus HOM05D001081 ORTHO05D007101 6.8e-46 187.2 106 84.9
CDE05G3015 Ceratophyllum demersum HOM05D001081 ORTHO05D007101 1.2e-45 186.4 106 82.1
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 1.2e-45 186.4 106 83.0
Cfa016232 Carpinus fangiana HOM05D001081 ORTHO05D007101 3.4e-45 184.9 106 82.1
GSVIVG01009969001 Vitis vinifera HOM05D001081 ORTHO05D007101 4.4e-45 184.5 105 81.9
CiPaw.06G046200 Carya illinoinensis HOM05D001081 ORTHO05D007101 7.5e-45 183.7 106 82.1
Os05g0114600 Oryza sativa ssp. japonica HOM05D001081 ORTHO05D007101 7.5e-45 183.7 106 83.0
PSO541G4732 Papaver somniferum HOM05D001081 ORTHO05D007101 7.5e-45 183.7 106 84.0
PSO675G3624 Papaver somniferum HOM05D001081 ORTHO05D007101 7.5e-45 183.7 106 84.0
Atru.chr12.2201 Acer truncatum HOM05D001081 ORTHO05D007101 9.8e-45 183.3 107 81.3
Glyma.05G143900 Glycine max HOM05D001081 ORTHO05D007101 9.8e-45 183.3 106 82.1
Phvul.001G061700 Phaseolus vulgaris HOM05D001081 ORTHO05D007101 9.8e-45 183.3 106 81.1
QL09p008866 Quercus lobata HOM05D001081 ORTHO05D007101 9.8e-45 183.3 106 82.1
QL09p009112 Quercus lobata HOM05D001081 ORTHO05D007101 9.8e-45 183.3 106 82.1
Zm00001eb355650 Zea mays HOM05D001081 ORTHO05D007101 9.8e-45 183.3 107 83.2
HanXRQChr14g0429651 Helianthus annuus HOM05D001081 ORTHO05D007101 1.3e-44 183.0 104 80.8
Lsat_1_v5_gn_2_7800 Lactuca sativa HOM05D000015 ORTHO05D002445 1.7e-44 182.6 104 80.8
Lalb_Chr13g0294051 Lupinus albus HOM05D001081 ORTHO05D007101 1.7e-44 182.6 106 81.1
vmacro12512 Vaccinium macrocarpon HOM05D001081 ORTHO05D007101 1.7e-44 182.6 105 81.9
PGSC0003DMG401028646 Solanum tuberosum HOM05D001081 ORTHO05D007101 2.2e-44 182.2 103 82.5
PGSC0003DMG402028646 Solanum tuberosum HOM05D001081 ORTHO05D007101 2.2e-44 182.2 103 82.5
Lj4P697T30 Lonicera japonica HOM05D001081 ORTHO05D007101 2.9e-44 181.8 104 80.8
Phvul.003G125501 Phaseolus vulgaris HOM05D001081 ORTHO05D007101 2.9e-44 181.8 106 79.2
Glyma.08G100200 Glycine max HOM05D001081 ORTHO05D007101 3.7e-44 181.4 106 80.2
unitig_32.g11232 Utricularia gibba HOM05D001081 ORTHO05D007101 3.7e-44 181.4 103 82.5
Duzib068G1165 Durio zibethinus HOM05D001081 ORTHO05D007101 4.9e-44 181.0 106 82.1
Eucgr.F01156 Eucalyptus grandis HOM05D001081 ORTHO05D007101 4.9e-44 181.0 105 81.9
Prupe.2G309800 Prunus persica HOM05D001081 ORTHO05D007101 8.3e-44 180.3 106 82.1
TWI74G0183 Tripterygium wilfordii HOM05D001081 ORTHO05D007101 1.1e-43 179.9 107 78.5
VMungo0251G0734 Vigna mungo HOM05D001081 ORTHO05D007101 1.1e-43 179.9 106 79.2
Cpa.g.sc3.88 Carica papaya HOM05D001081 ORTHO05D007101 1.4e-43 179.5 106 81.1
Lj5g0017992 Lotus japonicus HOM05D001081 ORTHO05D007101 1.4e-43 179.5 106 80.2
RcHm_v2.0_Chr1g0380551 Rosa chinensis HOM05D001081 ORTHO05D007101 1.4e-43 179.5 106 81.1
TAR381G1700 Trochodendron aralioides HOM05D001081 ORTHO05D007101 1.4e-43 179.5 106 80.2
Lj4g0009093 Lotus japonicus HOM05D001081 ORTHO05D007101 1.8e-43 179.1 106 79.2
PGR083G2221 Punica granatum HOM05D001081 ORTHO05D007101 1.8e-43 179.1 105 81.0
MBI07_g23667_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D007101 2.4e-43 178.7 105 79.0
Sopen12g021840 Solanum pennellii HOM05D001081 ORTHO05D007101 2.4e-43 178.7 103 79.6
Duzib205G0894 Durio zibethinus HOM05D001081 ORTHO05D007101 3.2e-43 178.3 106 81.1
Nitab4.5_0004146g0010 Nicotiana tabacum HOM05D001081 ORTHO05D007101 3.2e-43 178.3 103 81.6
Sopen12g021900 Solanum pennellii HOM05D001081 ORTHO05D007101 3.2e-43 178.3 103 79.6
CAN.G411.51 Capsicum annuum HOM05D001081 ORTHO05D007101 4.1e-43 177.9 103 79.6
Thecc.03G199300 Theobroma cacao HOM05D001081 ORTHO05D007101 4.1e-43 177.9 106 81.1
FvH4_7g31560 Fragaria vesca HOM05D001081 ORTHO05D007101 5.4e-43 177.6 106 81.1
FAN01G2588 Fragaria x ananassa HOM05D001081 ORTHO05D007101 5.4e-43 177.6 106 81.1
FAN06G0656 Fragaria x ananassa HOM05D001081 ORTHO05D007101 5.4e-43 177.6 106 81.1
FAN10G3364 Fragaria x ananassa HOM05D001081 ORTHO05D007101 5.4e-43 177.6 106 81.1
FAN10G4231 Fragaria x ananassa HOM05D001081 ORTHO05D007101 5.4e-43 177.6 106 81.1
Psat7g080240 Pisum sativum HOM05D001081 ORTHO05D007101 5.4e-43 177.6 106 78.3
Sed0012325 Sechium edule HOM05D001081 ORTHO05D007101 5.4e-43 177.6 106 78.3
Cc10_g01340 Coffea canephora HOM05D001081 ORTHO05D007101 7.0e-43 177.2 103 80.6
COL.COLO4_16767 Corchorus olitorius HOM05D001081 ORTHO05D007101 7.0e-43 177.2 106 80.2
MD07G1288300 Malus domestica HOM05D001081 ORTHO05D007101 7.0e-43 177.2 106 79.2
Gohir.A05G100100 Gossypium hirsutum HOM05D001081 ORTHO05D007101 9.2e-43 176.8 106 79.2
THA.LOC104798899 Tarenaya hassleriana HOM05D001081 ORTHO05D007101 9.2e-43 176.8 106 78.3
TPR.G9557 Trifolium pratense HOM05D001081 ORTHO05D007101 9.2e-43 176.8 106 80.2
vmacro07565 Vaccinium macrocarpon HOM05D001081 ORTHO05D007101 9.2e-43 176.8 105 79.0
Atru.chr9.478 Acer truncatum HOM05D001081 ORTHO05D007101 1.2e-42 176.4 107 77.6
BcaC09g51172 Brassica carinata HOM05D001081 ORTHO05D007101 1.2e-42 176.4 105 81.0
BcaNung05107 Brassica carinata HOM05D001081 ORTHO05D007101 1.2e-42 176.4 105 81.0
A01p13390 Brassica napus HOM05D001081 ORTHO05D007101 1.2e-42 176.4 105 81.0
C01p16100 Brassica napus HOM05D001081 ORTHO05D007101 1.2e-42 176.4 105 81.0
BolC1t01570H Brassica oleracea HOM05D001081 ORTHO05D007101 1.2e-42 176.4 105 81.0
BraA01t01281Z Brassica rapa HOM05D001081 ORTHO05D007101 1.2e-42 176.4 105 81.0
Thhalv10026223m.g Eutrema salsugineum HOM05D001081 ORTHO05D007101 1.2e-42 176.4 105 81.0
HPP92_008968 Vanilla planifolia HOM05D001081 ORTHO05D007101 1.2e-42 176.4 105 77.1
Nitab4.5_0004513g0030 Nicotiana tabacum HOM05D001081 ORTHO05D007101 1.6e-42 176.0 103 79.6
Peaxi162Scf00071g00017 Petunia axillaris HOM05D001081 ORTHO05D007101 1.6e-42 176.0 103 81.6
Ca_18157_v3 Cicer arietinum L. HOM05D001081 ORTHO05D007101 2.0e-42 175.6 106 77.4
Sed0024875 Sechium edule HOM05D001081 ORTHO05D007101 2.0e-42 175.6 106 79.2
FAN03G0412 Fragaria x ananassa HOM05D001081 ORTHO05D007101 2.7e-42 175.3 106 80.2
Sp7g20190 Schrenkiella parvula HOM05D001081 ORTHO05D007101 2.7e-42 175.3 105 80.0
FAN06G3917 Fragaria x ananassa HOM05D001081 ORTHO05D007101 3.5e-42 174.9 106 80.2
Gohir.D05G099900 Gossypium hirsutum HOM05D001081 ORTHO05D007101 3.5e-42 174.9 106 78.3
Gorai.009G103900 Gossypium raimondii HOM05D001081 ORTHO05D007101 3.5e-42 174.9 106 78.3
Medtr8g079498 Medicago truncatula HOM05D001081 ORTHO05D007101 3.5e-42 174.9 106 79.2
AL7G31700 Arabidopsis lyrata HOM05D001081 ORTHO05D007101 6.0e-42 174.1 105 80.0
AT4G22000 Arabidopsis thaliana HOM05D001081 ORTHO05D007101 6.0e-42 174.1 105 80.0
CARHR228810 Cardamine hirsuta HOM05D001081 ORTHO05D007101 7.8e-42 173.7 105 79.0
SGA_v2.0_scaffold19G08564 Striga asiatica HOM05D001081 ORTHO05D007101 7.8e-42 173.7 103 79.6
SGA_v2.0_scaffold25G11207 Striga asiatica HOM05D001081 ORTHO05D007101 7.8e-42 173.7 103 79.6
SalBow6G0310 Salvia bowleyana HOM05D001081 ORTHO05D007101 1.0e-41 173.3 103 81.6
THA.LOC104823111 Tarenaya hassleriana HOM05D001081 ORTHO05D007101 1.0e-41 173.3 106 76.4
Carub.0007s1934 Capsella rubella HOM05D001081 ORTHO05D007101 1.7e-41 172.6 105 78.1
MSTRG.22347 Avicennia marina HOM05D001081 ORTHO05D007101 3.0e-41 171.8 103 78.6
Aa31LG6G3950 Aethionema arabicum HOM05D001081 ORTHO05D007101 5.0e-41 171.0 105 77.1
CsaV3_3G019840 Cucumis sativus L. HOM05D001081 ORTHO05D007101 5.0e-41 171.0 97 83.5
Migut.N03179 Erythranthe guttata HOM05D001081 ORTHO05D007101 5.0e-41 171.0 103 78.6
Solyc12g042700.3 Solanum lycopersicum HOM05D001081 ORTHO05D007101 5.0e-41 171.0 103 76.7
MELO3C008496.2 Cucumis melo HOM05D001081 ORTHO05D007101 6.6e-41 170.6 97 83.5
Potri.012G015800 Populus trichocarpa HOM05D001081 ORTHO05D007101 1.9e-40 169.1 106 74.5
Potri.015G012700 Populus trichocarpa HOM05D001081 ORTHO05D007101 3.3e-40 168.3 106 74.5
Manes.18G126800 Manihot esculenta HOM05D001081 ORTHO05D007101 4.3e-40 167.9 105 75.2
DCAR_013886 Daucus carota HOM05D001081 ORTHO05D007101 5.6e-40 167.5 104 74.0
SEGI_15379 Sequoiadendron giganteum HOM05D001081 ORTHO05D007101 1.2e-39 166.4 106 75.5
SHI02421 Sapria himalayana HOM05D006156 ORTHO05D007101 1.2e-37 159.8 103 72.8
CDE11G0170 Ceratophyllum demersum HOM05D001081 ORTHO05D007101 3.4e-37 158.3 106 75.5
MSTRG.25269 Avicennia marina HOM05D001081 ORTHO05D007101 1.3e-36 156.4 146 57.5
ATR1134G096 Amborella trichopoda HOM05D001081 ORTHO05D007101 2.2e-36 155.6 92 78.3
BcaB03g11721 Brassica carinata HOM05D001081 ORTHO05D007101 8.3e-36 153.7 105 73.3
ClCG05G008950 Citrullus lanatus HOM05D001081 ORTHO05D007101 7.8e-34 147.1 87 83.9
CSS0017659 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 6.6e-33 144.1 82 82.9
Mapoly0012s0096 Marchantia polymorpha HOM05D001081 ORTHO05D007101 9.2e-27 123.6 98 63.3
Dinv31879 Davidia involucrata HOM05D001081 ORTHO05D007101 1.2e-26 123.2 76 78.9
Solyc12g042720.3 Solanum lycopersicum HOM05D001081 ORTHO05D007101 6.0e-26 120.9 76 76.3
Pp3c15_6340 Physcomitrium patens HOM05D001081 ORTHO05D007101 1.3e-25 119.8 89 68.5
SMO356G0374 Selaginella moellendorffii HOM05D001081 ORTHO05D007101 1.7e-25 119.4 88 63.6
Actinidia17007 Actinidia chinensis HOM05D001081 ORTHO05D007101 4.3e-24 114.8 61 83.6
CSS0023065 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 3.4e-21 105.1 61 83.6
Gohir.A09G033580 Gossypium hirsutum HOM05D001081 ORTHO05D007101 6.4e-20 100.9 67 74.6
CSS0034162 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 1.6e-18 96.3 77 68.8
Gohir.D09G034100 Gossypium hirsutum HOM05D001081 ORTHO05D007101 1.0e-17 93.6 67 70.1
CBR_g8977 Chara braunii HOM05D001081 ORTHO05D007101 1.8e-14 82.8 89 49.4
arahy.Tifrunner.gnm1.ann1.EUX55C Arachis hypogaea HOM05D001081 ORTHO05D007101 2.0e-13 79.3 51 76.5
Gorai.006G039100 Gossypium raimondii HOM05D001081 ORTHO05D007101 1.7e-12 76.3 65 63.1
Nitab4.5_0001077g0030 Nicotiana tabacum HOM05D012963 ORTHO05D007101 4.9e-12 74.7 61 54.1
Zm00001eb266390 Zea mays HOM05D001081 ORTHO05D007101 2.7e-10 68.9 95 48.4


User provided reference genes

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