Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013608 Chenopodium quinoa HOM05D025767 ORTHO05D027022 7.7e-226 786.9 437 100.0
AUR62004239 Chenopodium quinoa HOM05D025767 ORTHO05D027022 8.7e-153 544.3 472 72.5
EL10Ac1g00930 Beta vulgaris HOM05D025767 ORTHO05D027022 2.1e-74 283.9 552 41.8
Ah.05g175260 Amaranthus hybridus HOM05D025767 ORTHO05D001298 6.0e-53 212.6 550 38.7
Sc12g0007140 Simmondsia chinensis HOM05D003305 ORTHO05D001298 2.3e-20 104.4 356 35.1
Hund27359 Selenicereus undatus HOM05D003305 ORTHO05D027022 1.0e-15 89.0 450 32.2
SGA_v2.0_scaffold171G38920 Striga asiatica HOM05D003305 ORTHO05D001298 1.3e-15 88.6 404 33.4
SGA_v2.0_scaffold168G38497 Striga asiatica HOM05D003305 ORTHO05D001298 2.7e-13 80.9 406 32.8
Cc04_g06460 Coffea canephora HOM05D003305 ORTHO05D001298 1.0e-12 79.0 426 31.9
Dinv10182 Davidia involucrata HOM05D003305 ORTHO05D001298 5.7e-11 73.2 392 29.3
Oeu046177.1 Olea europaea HOM05D003305 ORTHO05D001298 1.3e-10 72.0 463 28.3
Rhsim08G0132500 Rhododendron simsii HOM05D003305 ORTHO05D001298 1.3e-10 72.0 141 39.7
Migut.D01563 Erythranthe guttata HOM05D003305 ORTHO05D001298 2.8e-10 70.9 445 30.8
Actinidia39846 Actinidia chinensis HOM05D003305 ORTHO05D001298 3.7e-10 70.5 400 31.5
CSS0023887 Camellia sinensis var. sinensis HOM05D003305 ORTHO05D001298 4.8e-10 70.1 429 29.8
CSS0036038 Camellia sinensis var. sinensis HOM05D003305 ORTHO05D001298 1.1e-09 68.9 431 29.7
MSTRG.9293 Avicennia marina HOM05D003305 ORTHO05D001298 4.1e-09 67.0 406 32.0
MD06G1230400 Malus domestica HOM05D003305 ORTHO05D001298 9.1e-09 65.9 258 28.3
MD14G1235000 Malus domestica HOM05D003305 ORTHO05D001298 3.4e-08 63.9 259 28.2
QL10p028134 Quercus lobata HOM05D003305 ORTHO05D001298 1.0e-07 62.4 100 39.0
Oeu026293.1 Olea europaea HOM05D003305 ORTHO05D001298 1.7e-07 61.6 489 28.6
TWI81G0813 Tripterygium wilfordii HOM05D003305 ORTHO05D001298 2.2e-07 61.2 423 28.4
Sp1g35590 Schrenkiella parvula HOM05D003305 ORTHO05D001298 4.2e-06 57.0 266 32.3
BcaB02g11397 Brassica carinata HOM05D003305 ORTHO05D001298 5.5e-06 56.6 413 28.8
Glyma.05G245500 Glycine max HOM05D003305 ORTHO05D001298 7.2e-06 56.2 386 29.3


User provided reference genes

Program Settings