Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013453 Chenopodium quinoa HOM05D007988 ORTHO05D009824 4.1e-111 404.8 220 100.0
AUR62007686 Chenopodium quinoa HOM05D007988 ORTHO05D009824 4.2e-95 351.7 213 90.1
EL10Ac1g01385 Beta vulgaris HOM05D007988 ORTHO05D009824 3.0e-61 239.2 221 64.3
Hund26769 Selenicereus undatus HOM05D007988 ORTHO05D009824 1.1e-26 124.4 256 39.1
Ciclev10004037m.g Citrus clementina HOM05D007988 ORTHO05D009824 8.9e-13 78.2 220 33.6
Actinidia29496 Actinidia chinensis HOM05D000744 ORTHO05D000332 2.6e-12 76.6 215 38.1
Lalb_Chr10g0101461 Lupinus albus HOM05D007988 ORTHO05D009824 4.4e-12 75.9 229 31.9
Manes.02G170000 Manihot esculenta HOM05D007988 ORTHO05D009824 4.4e-12 75.9 194 34.5
Potri.002G076200 Populus trichocarpa HOM05D007988 ORTHO05D009824 5.8e-12 75.5 234 32.1
Haze_17653 Corylus avellana HOM05D007988 ORTHO05D009824 7.5e-12 75.1 193 37.8
TWI60G0631 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 9.8e-12 74.7 166 34.9
Sabra05G0140800 Salix brachista HOM05D007988 ORTHO05D009824 1.7e-11 73.9 183 35.0
Prupe.1G442100 Prunus persica HOM05D007988 ORTHO05D009824 2.2e-11 73.6 218 34.4
TWI34G1662 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 2.2e-11 73.6 166 33.7
GSVIVG01008783001 Vitis vinifera HOM05D007988 ORTHO05D009824 2.9e-11 73.2 232 34.9
Glyma.04G244300 Glycine max HOM05D007988 ORTHO05D009824 3.7e-11 72.8 234 32.5
Rhsim11G0074200 Rhododendron simsii HOM05D007988 ORTHO05D009824 4.9e-11 72.4 223 36.8
TPR.G6352 Trifolium pratense HOM05D007988 ORTHO05D009824 4.9e-11 72.4 214 32.7
Gohir.A05G239200 Gossypium hirsutum HOM05D007988 ORTHO05D009824 1.1e-10 71.2 239 30.5
Gohir.D05G240900 Gossypium hirsutum HOM05D007988 ORTHO05D009824 1.1e-10 71.2 199 32.7
Gorai.009G250000 Gossypium raimondii HOM05D007988 ORTHO05D009824 1.1e-10 71.2 199 32.7
CSS0046822 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 1.4e-10 70.9 223 34.1
Lj1g0027207 Lotus japonicus HOM05D007988 ORTHO05D009824 1.4e-10 70.9 213 32.4
Glyma.06G119000 Glycine max HOM05D007988 ORTHO05D009824 2.4e-10 70.1 171 34.5
VMungo1309G2256 Vigna mungo HOM05D007988 ORTHO05D009824 2.4e-10 70.1 209 33.0
ECA232G2067 Erigeron canadensis HOM05D007988 ORTHO05D009824 3.2e-10 69.7 229 31.9
Duzib093G1224 Durio zibethinus HOM05D007988 ORTHO05D009824 5.4e-10 68.9 187 34.8
QL09p030989 Quercus lobata HOM05D007988 ORTHO05D009824 7.0e-10 68.6 168 35.1
DCAR_003597 Daucus carota HOM05D007988 ORTHO05D009824 9.2e-10 68.2 220 32.3
MD15G1088100 Malus domestica HOM05D007988 ORTHO05D009824 9.2e-10 68.2 232 31.5
Thecc.08G135700 Theobroma cacao HOM05D007988 ORTHO05D009824 9.2e-10 68.2 202 33.2
CiPaw.15G029500 Carya illinoinensis HOM05D007988 ORTHO05D009824 1.2e-09 67.8 218 31.2
Duzib116G0104 Durio zibethinus HOM05D007988 ORTHO05D009824 2.7e-09 66.6 178 32.0
TAR381G0794 Trochodendron aralioides HOM05D007988 ORTHO05D009824 2.7e-09 66.6 225 32.4
Psat0s3071g0240 Pisum sativum HOM05D007988 ORTHO05D009824 3.5e-09 66.2 205 33.7
Phvul.009G131400 Phaseolus vulgaris HOM05D007988 ORTHO05D009824 4.6e-09 65.9 170 32.9
CiPaw.16G021200 Carya illinoinensis HOM05D007988 ORTHO05D009824 6.0e-09 65.5 175 36.0
Dinv37735 Davidia involucrata HOM05D007988 ORTHO05D009824 7.8e-09 65.1 162 35.8
Medtr3g088735 Medicago truncatula HOM05D007988 ORTHO05D009824 7.8e-09 65.1 221 32.1
Duzib041G0811 Durio zibethinus HOM05D007988 ORTHO05D009824 1.0e-08 64.7 230 30.9
Cc10_g13460 Coffea canephora HOM05D007988 ORTHO05D009824 1.3e-08 64.3 244 30.3
Lj4P663T19 Lonicera japonica HOM05D007988 ORTHO05D009824 3.9e-08 62.8 195 33.3
Lj4P666T14 Lonicera japonica HOM05D007988 ORTHO05D009824 5.0e-08 62.4 191 34.6
CAN.G46.16 Capsicum annuum HOM05D007988 ORTHO05D009824 6.6e-08 62.0 194 36.1
Ca_16619_v3 Cicer arietinum L. HOM05D007988 ORTHO05D009824 6.6e-08 62.0 189 31.2
Atru.chr13.1616 Acer truncatum HOM05D007988 ORTHO05D009824 8.6e-08 61.6 177 34.5
Nn1g08990 Nelumbo nucifera HOM05D007988 ORTHO05D009824 8.6e-08 61.6 225 32.0
COL.COLO4_33785 Corchorus olitorius HOM05D007988 ORTHO05D009824 1.1e-07 61.2 241 27.4
Lalb_Chr04g0253601 Lupinus albus HOM05D007988 ORTHO05D009824 1.1e-07 61.2 165 32.1
FAN27G1764 Fragaria x ananassa HOM05D007988 ORTHO05D009824 1.5e-07 60.8 174 33.3
FAN15G1013 Fragaria x ananassa HOM05D007988 ORTHO05D009824 4.3e-07 59.3 169 33.7
PGSC0003DMG400002385 Solanum tuberosum HOM05D007988 ORTHO05D009824 4.3e-07 59.3 210 33.8
FvH4_2g35040 Fragaria vesca HOM05D007988 ORTHO05D009824 7.3e-07 58.5 186 32.8
RcHm_v2.0_Chr6g0306951 Rosa chinensis HOM05D007988 ORTHO05D009824 7.3e-07 58.5 171 32.2
FAN20G0590 Fragaria x ananassa HOM05D007988 ORTHO05D009824 2.1e-06 57.0 169 33.1
HanXRQChr09g0256671 Helianthus annuus HOM05D007988 ORTHO05D009824 4.7e-06 55.8 223 31.8
Oeu022143.1 Olea europaea HOM05D007988 ORTHO05D009824 8.1e-06 55.1 221 31.7
SGA_v2.0_scaffold52G18904 Striga asiatica HOM05D007988 ORTHO05D009824 8.1e-06 55.1 204 29.4


User provided reference genes

Program Settings