Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 2.5e-128 462.2 254 100.0
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.5e-109 399.8 254 89.4
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 2.5e-75 286.2 258 70.9
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 2.6e-72 276.2 265 67.5
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 4.0e-57 225.7 263 55.5
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 8.9e-57 224.6 257 59.1
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.0e-56 223.4 252 55.2
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 8.3e-55 218.0 252 55.6
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.1e-54 217.6 259 54.1
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 2.4e-54 216.5 252 55.2
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 4.1e-54 215.7 253 55.3
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 7.0e-54 214.9 252 56.3
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 7.0e-54 214.9 257 54.5
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 9.2e-54 214.5 255 56.9
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.2e-53 214.2 245 56.3
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 1.6e-53 213.8 254 54.7
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 3.5e-53 212.6 254 52.8
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 3.5e-53 212.6 253 54.5
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 7.8e-53 211.5 260 53.8
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 7.8e-53 211.5 259 54.1
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 1.0e-52 211.1 252 52.8
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.7e-52 210.3 260 54.6
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 2.3e-52 209.9 256 55.1
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 2.3e-52 209.9 255 53.7
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 3.0e-52 209.5 256 53.1
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 5.0e-52 208.8 237 55.7
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.1e-51 207.6 254 55.1
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 1.5e-51 207.2 195 61.0
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.9e-51 206.8 253 54.5
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.9e-51 206.8 255 53.3
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 2.5e-51 206.5 253 52.6
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.3e-51 206.1 253 55.3
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 3.3e-51 206.1 253 53.0
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.6e-50 203.8 238 53.4
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 1.6e-50 203.8 265 53.6
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 2.1e-50 203.4 259 54.1
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 3.6e-50 202.6 267 52.1
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 3.6e-50 202.6 253 53.8
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 3.6e-50 202.6 238 53.4
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 6.2e-50 201.8 205 57.1
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.0e-49 201.1 254 53.1
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 1.0e-49 201.1 254 53.1
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.4e-49 200.7 204 59.3
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 1.8e-49 200.3 238 52.5
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 2.3e-49 199.9 260 51.9
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 2.3e-49 199.9 255 51.0
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.3e-49 199.9 238 53.4
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 3.1e-49 199.5 254 52.4
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 3.1e-49 199.5 205 56.6
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 3.1e-49 199.5 259 53.3
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 3.1e-49 199.5 252 53.6
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 3.1e-49 199.5 253 51.4
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 5.2e-49 198.7 252 52.4
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 8.9e-49 198.0 252 52.8
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 1.2e-48 197.6 252 51.6
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.5e-48 197.2 260 50.8
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 2.0e-48 196.8 276 50.7
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 4.4e-48 195.7 254 51.2
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 7.5e-48 194.9 259 51.7
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 7.5e-48 194.9 253 51.0
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 7.5e-48 194.9 255 51.0
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 9.8e-48 194.5 257 51.0
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.9e-47 193.0 266 51.1
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 3.7e-47 192.6 243 52.7
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 4.9e-47 192.2 233 54.1
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 4.9e-47 192.2 252 51.2
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 6.4e-47 191.8 234 52.6
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.9e-46 190.3 259 50.2
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 5.4e-46 188.7 252 53.2
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 9.2e-46 188.0 252 50.4
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 6.0e-45 185.3 253 49.0
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 6.0e-45 185.3 252 49.6
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 6.6e-44 181.8 240 50.8
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.5e-43 180.6 152 67.1
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.5e-43 180.6 189 58.2
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.5e-43 179.9 165 63.6
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 3.3e-43 179.5 190 56.3
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 3.3e-43 179.5 261 51.7
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 5.6e-43 178.7 230 50.0
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 7.3e-43 178.3 257 48.6
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 3.6e-42 176.0 165 61.8
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 3.6e-42 176.0 241 49.8
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 3.6e-42 176.0 241 49.4
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 3.6e-42 176.0 212 52.4
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 4.7e-42 175.6 165 60.6
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 4.7e-42 175.6 165 60.6
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 8.1e-42 174.9 241 49.4
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 8.1e-42 174.9 241 49.0
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 8.1e-42 174.9 200 53.0
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.1e-41 174.5 211 52.1
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.1e-41 174.5 236 48.7
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.4e-41 174.1 241 49.4
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.4e-41 174.1 234 48.7
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.4e-41 174.1 257 47.9
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.1e-41 172.9 193 54.4
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 3.1e-41 172.9 178 56.2
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 4.0e-41 172.6 165 59.4
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 5.2e-41 172.2 258 46.9
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 6.8e-41 171.8 237 51.1
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 6.8e-41 171.8 234 48.3
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 1.2e-40 171.0 240 50.8
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.5e-40 170.6 201 50.7
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 2.6e-40 169.9 165 58.8
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 9.8e-40 167.9 190 54.2
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.3e-39 167.5 193 56.0
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 8.3e-39 164.9 186 51.6
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.3e-36 157.5 224 50.9
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 3.2e-30 136.3 195 50.3
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 5.4e-30 135.6 123 62.6
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 2.7e-29 133.3 158 53.2
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.0e-28 131.3 123 60.2
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 3.0e-28 129.8 218 44.0
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 8.6e-28 128.3 195 45.6
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 4.7e-26 122.5 218 44.5
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 6.2e-26 122.1 195 45.1
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 8.1e-26 121.7 187 40.6
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 2.4e-25 120.2 162 45.7
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 1.6e-21 107.5 104 53.8
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 6.0e-21 105.5 191 40.3
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.0e-20 104.8 205 37.1
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.1e-17 94.7 127 43.3
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 7.6e-16 88.6 93 53.8
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 3.5e-13 79.7 142 40.1
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.9e-06 57.4 112 38.4


User provided reference genes

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