Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 0.0e+00 2218.4 1120 100.0
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 0.0e+00 1457.2 1125 66.9
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 3.8e-269 932.2 1159 45.9
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 8.8e-266 921.0 1166 46.8
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 7.9e-259 897.9 1153 45.7
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 3.9e-258 895.6 1211 44.7
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 6.3e-256 888.3 1152 45.6
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 5.0e-253 878.6 1237 44.5
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 2.5e-252 876.3 1136 47.0
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 2.2e-248 863.2 1157 44.5
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 1.4e-247 860.5 1130 45.3
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 4.1e-247 859.0 1149 44.1
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 5.3e-247 858.6 1149 45.7
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 2.6e-246 856.3 1151 44.1
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.2e-243 847.4 1149 43.9
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 8.0e-243 844.7 1150 44.9
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.5e-241 840.5 1149 44.0
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 2.2e-240 836.6 1158 43.9
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 2.8e-240 836.3 1146 43.5
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 3.7e-240 835.9 1157 43.5
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 4.8e-240 835.5 1171 43.1
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 2.4e-239 833.2 1157 44.2
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 3.1e-239 832.8 1149 43.6
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 4.5e-238 828.9 1150 44.0
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 2.2e-237 826.6 1159 43.5
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 7.2e-236 821.6 1147 43.1
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 3.0e-234 816.2 1152 42.4
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 5.2e-234 815.5 1146 42.7
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 8.8e-234 814.7 1159 44.1
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 8.3e-232 808.1 1144 42.6
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 7.7e-230 801.6 1154 43.2
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 7.7e-230 801.6 1141 43.3
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 1.5e-228 797.3 1146 41.9
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 9.5e-228 794.7 1253 39.7
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 2.0e-225 786.9 1133 42.2
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 3.4e-225 786.2 1165 42.1
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 3.4e-225 786.2 1033 46.1
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 1.2e-222 777.7 1106 43.3
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 3.6e-219 766.1 1142 40.7
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 6.2e-219 765.4 1138 42.2
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 8.0e-219 765.0 878 49.2
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 2.4e-215 753.4 1131 41.1
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 1.2e-214 751.1 1152 39.2
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 2.3e-213 746.9 1142 40.1
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 5.0e-213 745.7 1138 39.9
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 1.5e-212 744.2 1143 40.1
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 3.6e-211 739.6 1142 39.8
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 2.0e-209 733.8 1169 39.3
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 9.2e-207 724.9 984 43.5
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 9.5e-204 714.9 1134 38.6
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 3.1e-202 709.9 1128 40.0
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 7.1e-199 698.7 1160 39.6
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.6e-198 697.6 870 45.7
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 3.1e-194 683.3 1137 38.4
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 3.9e-189 666.4 1142 37.6
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 5.1e-189 666.0 1001 39.6
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 7.1e-183 645.6 1147 39.0
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 2.5e-180 637.1 1018 38.9
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 1.6e-171 607.8 789 44.4
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 9.0e-170 602.1 957 39.6
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.5e-164 584.7 854 41.1
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 7.6e-161 572.4 702 45.2
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 6.5e-160 569.3 1093 37.3
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 3.7e-155 553.5 1030 37.2
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 6.1e-150 536.2 872 38.6
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 6.9e-146 522.7 319 87.5
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 7.7e-145 519.2 407 67.1
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 3.8e-144 516.9 1110 32.4
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 5.0e-144 516.5 672 45.4
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 6.7e-141 506.1 879 37.8
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 3.7e-139 500.4 1221 30.3
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.4e-138 498.4 1139 33.6
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 9.4e-135 485.7 928 34.9
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 7.5e-124 449.5 1148 32.1
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 2.2e-115 421.4 1085 31.2
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 1.6e-105 388.7 885 32.3
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 3.3e-95 354.4 303 61.4
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 4.7e-78 297.4 906 27.8
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 7.3e-71 273.5 1088 26.2
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 8.7e-64 250.0 326 45.7
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 2.4e-61 241.9 264 52.7
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 2.0e-60 238.8 261 53.3
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 3.8e-59 234.6 198 57.6
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 2.4e-58 231.9 154 77.9
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 1.9e-55 222.2 237 55.7
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.6e-54 219.2 422 33.9
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 4.8e-54 217.6 274 48.9
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 7.6e-52 210.3 213 56.8
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 2.5e-42 178.7 428 31.1
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 5.1e-40 171.0 403 29.8
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 1.4e-37 162.9 395 29.6
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 4.1e-37 161.4 160 56.9
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 4.1e-37 161.4 160 56.9
Hund30789 Selenicereus undatus HOM05D007419 ORTHO05D009327 3.8e-35 154.8 151 54.3
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 3.3e-31 141.7 984 20.6
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 5.7e-31 141.0 167 49.7
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.8e-29 136.0 160 50.0
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 1.7e-27 129.4 123 60.2
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 1.9e-26 125.9 222 38.3
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 4.4e-23 114.8 85 68.2
Nn8g39545 Nelumbo nucifera HOM05D007419 ORTHO05D009327 2.4e-13 82.4 92 50.0
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 4.1e-13 81.6 306 21.9


User provided reference genes

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