Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 5.7e-217 757.3 380 100.0
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 8.6e-181 637.1 380 85.3
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 1.8e-175 619.4 379 81.8
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 3.3e-140 502.3 380 67.9
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 9.0e-130 467.6 298 76.2
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 1.4e-114 417.2 333 59.8
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 5.9e-113 411.8 322 61.8
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 1.7e-112 410.2 292 66.1
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 1.6e-110 403.7 294 64.3
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 4.6e-110 402.1 358 56.1
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 1.4e-109 400.6 380 55.0
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 1.5e-108 397.1 306 63.4
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 5.7e-108 395.2 364 54.9
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 9.7e-108 394.4 377 54.4
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.3e-107 394.0 325 58.8
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 1.1e-106 391.0 294 61.9
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 2.4e-106 389.8 274 67.9
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 5.3e-106 388.7 326 58.3
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 6.9e-106 388.3 325 57.5
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 9.1e-106 387.9 290 62.4
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 9.1e-106 387.9 328 57.3
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 1.2e-105 387.5 382 53.7
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 1.0e-104 384.4 355 54.4
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 1.0e-104 384.4 391 54.0
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 1.3e-104 384.0 300 60.0
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 1.3e-104 384.0 378 53.2
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 2.9e-104 382.9 352 57.1
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 3.8e-104 382.5 388 53.9
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 5.5e-103 378.6 374 53.7
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 7.2e-103 378.3 368 54.1
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 1.2e-102 377.5 326 56.7
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 6.1e-102 375.2 365 54.2
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 6.1e-102 375.2 318 56.9
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 1.0e-101 374.4 326 57.4
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 1.4e-101 374.0 367 52.6
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 1.4e-101 374.0 344 54.9
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 3.0e-101 372.9 293 60.4
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 3.9e-101 372.5 380 52.9
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 6.7e-101 371.7 380 52.6
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 6.7e-101 371.7 333 55.0
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 1.1e-100 370.9 374 51.9
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 1.1e-100 370.9 279 63.4
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 2.0e-100 370.2 364 53.3
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 5.7e-100 368.6 339 56.3
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 5.7e-100 368.6 389 51.2
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 9.7e-100 367.9 378 52.4
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 9.7e-100 367.9 301 59.8
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 1.3e-99 367.5 327 55.7
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 1.7e-99 367.1 284 59.5
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 2.2e-99 366.7 364 52.5
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 2.8e-99 366.3 313 56.9
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 6.3e-99 365.2 292 59.2
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 6.3e-99 365.2 364 53.0
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 8.2e-99 364.8 367 52.0
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 5.3e-98 362.1 365 51.8
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 2.0e-97 360.1 385 49.1
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 2.6e-97 359.8 297 58.2
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 5.9e-97 358.6 363 52.1
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 1.0e-96 357.8 361 55.1
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 1.7e-96 357.1 316 57.9
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 1.7e-96 357.1 331 54.7
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 2.9e-96 356.3 293 58.7
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 5.0e-96 355.5 338 55.3
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 1.2e-94 350.9 296 58.1
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 1.2e-94 350.9 293 59.4
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 1.6e-94 350.5 387 50.9
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 2.7e-94 349.7 358 50.6
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.7e-94 349.7 360 54.4
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 3.6e-94 349.4 304 57.9
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 3.6e-94 349.4 293 58.7
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 2.3e-93 346.7 382 50.8
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 3.0e-93 346.3 330 54.2
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 6.7e-93 345.1 360 51.1
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 8.8e-93 344.7 335 52.5
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 1.5e-92 344.0 361 50.4
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 2.0e-92 343.6 329 52.6
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 2.0e-92 343.6 329 52.6
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 1.1e-90 337.8 319 54.5
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 1.2e-89 334.3 306 53.6
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 1.0e-88 331.3 322 54.7
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 1.6e-86 323.9 330 52.4
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 1.6e-86 323.9 310 54.5
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 8.0e-86 321.6 282 56.7
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 2.0e-84 317.0 371 46.6
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 4.1e-82 309.3 250 60.4
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 7.7e-81 305.1 237 60.3
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 8.0e-78 295.0 337 45.4
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 1.0e-77 294.7 230 60.4
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 7.5e-76 288.5 375 43.7
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 9.8e-76 288.1 296 52.4
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 2.0e-68 263.8 311 46.0
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 1.9e-58 230.7 343 39.1
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 2.1e-54 217.2 359 36.8
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 8.0e-54 215.3 159 62.3
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 2.6e-52 210.3 315 38.1
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 6.6e-48 195.7 158 58.9
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 2.0e-44 184.1 225 42.2
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 4.4e-44 183.0 293 35.8
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.6e-41 174.5 168 53.6
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 7.6e-36 155.6 298 30.9
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.3e-32 144.8 125 60.0
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 3.3e-31 140.2 221 42.5
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 4.9e-27 126.3 125 55.2
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 3.5e-25 120.2 100 57.0
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.5e-23 114.8 132 48.5
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.3e-22 111.7 87 63.2
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 4.0e-21 106.7 307 30.0
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 7.9e-17 92.4 274 28.1
MCO16G326 Micromonas commoda HOM05D007297 ORTHO05D268116 4.8e-06 56.6 106 30.2


User provided reference genes

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