Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013005 Chenopodium quinoa HOM05D000267 ORTHO05D009944 0.0e+00 1101.7 543 100.0
AUR62010015 Chenopodium quinoa HOM05D000267 ORTHO05D009944 2.3e-280 968.4 501 95.6
AUR62015150 Chenopodium quinoa HOM05D000267 ORTHO05D009944 1.3e-267 926.0 501 92.6
EL10Ac9g21344 Beta vulgaris HOM05D000267 ORTHO05D009944 1.0e-264 916.4 532 84.2
Sc14g0002320 Simmondsia chinensis HOM05D000267 ORTHO05D009944 1.1e-232 810.1 524 74.4
CSS0022193 Camellia sinensis var. sinensis HOM05D000267 ORTHO05D009944 1.1e-216 756.9 552 66.7
Rhsim11G0193400 Rhododendron simsii HOM05D000267 ORTHO05D009944 6.4e-214 747.7 589 63.0
Actinidia18043 Actinidia chinensis HOM05D000267 ORTHO05D002764 2.1e-209 732.6 523 66.9
TAR628G1652 Trochodendron aralioides HOM05D000267 ORTHO05D009944 1.0e-203 713.8 522 65.3
QL11p051524 Quercus lobata HOM05D000267 ORTHO05D009944 2.3e-203 712.6 525 66.5
Prupe.8G168300 Prunus persica HOM05D000267 ORTHO05D009944 3.0e-203 712.2 536 66.2
Migut.B00061 Erythranthe guttata HOM05D000267 ORTHO05D009944 1.1e-202 710.3 546 62.3
Thecc.02G056000 Theobroma cacao HOM05D000267 ORTHO05D009944 5.7e-202 708.0 549 63.9
CiPaw.05G084800 Carya illinoinensis HOM05D000267 ORTHO05D009944 2.1e-201 706.1 574 62.0
GSVIVG01023990001 Vitis vinifera HOM05D000267 ORTHO05D009944 3.1e-200 702.2 545 63.5
Gorai.008G037400 Gossypium raimondii HOM05D000267 ORTHO05D009944 1.0e-198 697.2 496 67.9
THA.LOC104807804 Tarenaya hassleriana HOM05D000267 ORTHO05D009944 3.8e-198 695.3 526 63.9
MD05G1124600 Malus domestica HOM05D000267 ORTHO05D009944 1.1e-197 693.7 537 66.1
Gohir.D12G036200 Gossypium hirsutum HOM05D000267 ORTHO05D009944 9.3e-197 690.6 496 67.5
Cfa005283 Carpinus fangiana HOM05D000267 ORTHO05D002764 1.2e-196 690.3 525 65.7
TWI79G0018 Tripterygium wilfordii HOM05D000267 ORTHO05D009944 2.7e-196 689.1 543 62.6
Atru.chr5.3400 Acer truncatum HOM05D000267 ORTHO05D009944 3.5e-196 688.7 551 63.2
FAN20G0365 Fragaria x ananassa HOM05D000267 ORTHO05D009944 5.1e-195 684.9 544 62.7
FvH4_2g15600 Fragaria vesca HOM05D000267 ORTHO05D009944 1.5e-194 683.3 542 63.3
Manes.11G097600 Manihot esculenta HOM05D000267 ORTHO05D009944 1.3e-193 680.2 545 61.8
Eucgr.I01454 Eucalyptus grandis HOM05D000267 ORTHO05D009944 8.2e-193 677.6 515 64.3
COL.COLO4_17372 Corchorus olitorius HOM05D000267 ORTHO05D009944 9.0e-192 674.1 500 66.0
Potri.004G177400 Populus trichocarpa HOM05D000267 ORTHO05D009944 4.5e-191 671.8 536 62.1
Duzib132G0985 Durio zibethinus HOM05D000267 ORTHO05D009944 2.2e-190 669.5 544 61.2
vmacro02289 Vaccinium macrocarpon HOM05D000267 ORTHO05D009944 2.9e-190 669.1 460 68.0
MBI05_g00165_MAGBIO Magnolia biondii HOM05D000267 ORTHO05D009944 1.1e-189 667.2 530 61.5
Cc09_g10270 Coffea canephora HOM05D000267 ORTHO05D009944 1.4e-189 666.8 504 65.3
Nitab4.5_0000079g0250 Nicotiana tabacum HOM05D000267 ORTHO05D000298 1.2e-188 663.7 507 64.1
Dinv41920 Davidia involucrata HOM05D000267 ORTHO05D002764 3.9e-187 658.7 482 67.2
CsaV3_2G016240 Cucumis sativus L. HOM05D000267 ORTHO05D009944 4.3e-186 655.2 500 63.4
ClCG02G012080 Citrullus lanatus HOM05D000267 ORTHO05D009944 5.3e-184 648.3 501 61.7
FAN24G1303 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.7e-182 643.3 636 54.1
Cpa.g.sc20.108 Carica papaya HOM05D000267 ORTHO05D009944 2.9e-182 642.5 551 58.1
FAN27G0796 Fragaria x ananassa HOM05D000267 ORTHO05D009944 2.3e-179 632.9 571 57.3
Nitab4.5_0007484g0010 Nicotiana tabacum HOM05D000267 ORTHO05D009944 7.4e-178 627.9 514 61.5
Hma1.2p1_0163F.1_g072670 Hydrangea macrophylla HOM05D000267 ORTHO05D009944 4.8e-177 625.2 447 66.9
ATR0661G537 Amborella trichopoda HOM05D000267 ORTHO05D009944 3.2e-173 612.5 538 57.4
AagrBONN_evm.TU.Sc2ySwM_344.2069 Anthoceros agrestis HOM05D000267 ORTHO05D009944 3.0e-171 605.9 529 54.8
Sed0004064 Sechium edule HOM05D000267 ORTHO05D009944 9.7e-170 600.9 500 58.8
FAN15G3022 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.1e-168 597.4 546 58.8
Pp3c3_37260 Physcomitrium patens HOM05D000267 ORTHO05D009944 3.1e-168 595.9 509 55.0
SMO367G0708 Selaginella moellendorffii HOM05D000267 ORTHO05D009944 1.0e-166 590.9 534 54.3
Os04g0560500 Oryza sativa ssp. japonica HOM05D000267 ORTHO05D009944 1.3e-166 590.5 544 53.3
CANSAT25G1222 Cannabis sativa HOM05D000267 ORTHO05D009944 6.5e-166 588.2 465 61.9
Mapoly0001s0154 Marchantia polymorpha HOM05D000267 ORTHO05D009944 8.8e-163 577.8 533 53.3
Haze_02110 Corylus avellana HOM05D000267 ORTHO05D009944 2.6e-162 576.2 527 58.1
MELO3C020832.2 Cucumis melo HOM05D000267 ORTHO05D009944 2.6e-162 576.2 546 55.7
Ah.01g023200 Amaranthus hybridus HOM05D000267 ORTHO05D009944 2.8e-161 572.8 471 63.1
Ciclev10028457m.g Citrus clementina HOM05D000267 ORTHO05D009944 5.9e-159 565.1 458 60.3
Gohir.A12G036400 Gossypium hirsutum HOM05D000267 ORTHO05D009944 3.8e-158 562.4 418 65.1
SalBow1G0833 Salvia bowleyana HOM05D000267 ORTHO05D009944 1.2e-156 557.4 557 52.4
Oeu015554.3 Olea europaea HOM05D000267 ORTHO05D002764 1.4e-152 543.9 544 51.1
Nn5g30837 Nelumbo nucifera HOM05D000267 ORTHO05D009944 3.5e-151 539.3 427 60.9
Zm00001eb074100 Zea mays HOM05D000267 ORTHO05D009944 3.8e-150 535.8 524 52.1
Atru.chr5.3388 Acer truncatum HOM05D000267 ORTHO05D009944 7.6e-114 415.2 303 66.0
Pp3c21_13310 Physcomitrium patens HOM05D000267 ORTHO05D009944 3.5e-111 406.4 522 42.9
RcHm_v2.0_Chr6g0278781 Rosa chinensis HOM05D000267 ORTHO05D009944 3.2e-104 383.3 318 60.7
Hund06449 Selenicereus undatus HOM05D000267 ORTHO05D009944 9.9e-98 361.7 214 80.4
Cre13.g587500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 5.5e-96 355.9 511 38.9
HPP92_001748 Vanilla planifolia HOM05D000267 ORTHO05D009944 2.5e-88 330.5 316 52.8
Cre17.g719500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 1.8e-86 324.3 550 37.1
Peaxi162Scf00078g01332 Petunia axillaris HOM05D000267 ORTHO05D009944 2.2e-81 307.4 227 67.0
Atru.chr5.3392 Acer truncatum HOM05D000267 ORTHO05D009944 5.0e-81 306.2 301 52.2
Actinidia20524 Actinidia chinensis HOM05D000267 ORTHO05D002764 1.9e-77 294.3 546 37.9
RcHm_v2.0_Chr6g0278801 Rosa chinensis HOM05D000267 ORTHO05D009944 9.0e-75 285.4 189 69.8
RcHm_v2.0_Chr6g0255801 Rosa chinensis HOM05D000267 ORTHO05D009944 7.9e-71 272.3 283 51.9
MCO05G576 Micromonas commoda HOM05D000267 ORTHO05D009944 1.8e-67 261.2 500 33.8
AagrBONN_evm.TU.Sc2ySwM_228.1198 Anthoceros agrestis HOM05D000267 ORTHO05D009944 1.6e-63 248.1 361 39.3
MCO05G735 Micromonas commoda HOM05D000267 ORTHO05D009944 3.3e-61 240.4 567 31.7
PRCOL_00001600 Prasinoderma coloniale HOM05D000267 ORTHO05D009944 1.8e-54 218.0 524 32.8
Peaxi162Scf00078g01331 Petunia axillaris HOM05D000267 ORTHO05D009944 5.3e-51 206.5 127 76.4
SEGI_17018 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 1.3e-41 175.3 221 42.1
Sabra04G0119300 Salix brachista HOM05D000267 ORTHO05D009944 7.2e-40 169.5 188 47.9
SEGI_10216 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 9.8e-37 159.1 229 35.4
HPP92_001749 Vanilla planifolia HOM05D000267 ORTHO05D009944 8.9e-30 136.0 85 74.1
RcHm_v2.0_Chr6g0255791 Rosa chinensis HOM05D000267 ORTHO05D009944 1.0e-25 122.5 86 69.8
CARHR111810 Cardamine hirsuta HOM05D000267 ORTHO05D009944 4.3e-24 117.1 90 62.2
Lj9A400T56 Lonicera japonica HOM05D000267 ORTHO05D009944 7.5e-21 106.3 74 66.2
SEGI_00421 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 1.1e-19 102.4 179 31.8
Thecc.02G059600 Theobroma cacao HOM05D000267 ORTHO05D009944 2.0e-18 98.2 75 62.7
MCO15G399 Micromonas commoda HOM05D002360 ORTHO05D006971 1.9e-16 91.7 503 20.5
RcHm_v2.0_Chr2g0123001 Rosa chinensis HOM05D000267 ORTHO05D009944 2.8e-15 87.8 65 67.7
MCO04G494 Micromonas commoda HOM05D002360 ORTHO05D006971 1.8e-14 85.1 496 23.4
vmacro02288 Vaccinium macrocarpon HOM05D000267 ORTHO05D009944 2.3e-14 84.7 110 50.9
Cre12.g509650 Chlamydomonas reinhardtii HOM05D002360 ORTHO05D006971 2.6e-13 81.3 491 22.0
Cre07.g314150 Chlamydomonas reinhardtii HOM05D002360 ORTHO05D006297 4.4e-13 80.5 500 22.0
SEGI_37732 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 9.2e-11 72.8 94 38.3
Migut.O00487 Erythranthe guttata HOM05D002360 ORTHO05D006297 1.1e-06 59.3 475 18.7


User provided reference genes

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